Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_J13
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   0.66 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   6.1  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    23   6.1  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    22   8.1  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   8.1  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 0.66
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +2

Query: 8   HGRIGKHRKHP-GGRGNAGGEHHHRINMDKYH 100
           +G  G H  H  GG   A G HHH+ +   +H
Sbjct: 702 YGGGGHHLSHHHGGAAAATGHHHHQHHAAPHH 733


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 56  AGGEHHHRINMDKYHPGYFG 115
           A   HHH  +   +HPG  G
Sbjct: 153 AAAMHHHHHHPHHHHPGLTG 172


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 355 EENHGCGWCLCTICV 399
           EE  G G C+C +CV
Sbjct: 558 EECSGRGQCVCGVCV 572


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
          protein protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 69 CSPPALPRPPGCLRCFPI 16
          C+PP +P  P C    P+
Sbjct: 38 CNPPGIPGGPACAGLKPM 55


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 370 CGWCLCTICVNNK 408
           C W LC +C + K
Sbjct: 33  CVWMLCEVCCSRK 45


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 32  KHPGGRGNAGGEHHHRINMDKYHPGY 109
           K    RGNA  EH  R+N+   + G+
Sbjct: 131 KSTNARGNAVLEHFSRLNLVLVNVGF 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,487
Number of Sequences: 2352
Number of extensions: 7957
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)