Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_J13
(433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 149 8e-37
AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical ... 58 4e-09
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 33 0.088
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 33 0.088
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 31 0.27
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 31 0.27
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 31 0.27
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 31 0.47
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 30 0.82
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 0.82
AC024817-17|AAU87811.1| 178|Caenorhabditis elegans C-type lecti... 29 1.4
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 2.5
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 2.5
AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical... 28 2.5
AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical ... 28 2.5
AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical... 28 3.3
Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical pr... 27 4.4
AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf gro... 27 4.4
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 149 bits (361), Expect = 8e-37
Identities = 68/131 (51%), Positives = 83/131 (63%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
GHGRIGKHRKHPGGRGNAGG+HHHRIN DKYHPGYFGK+GMR FH KN+++CP +N+++
Sbjct: 18 GHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRVFHLNKNQHYCPTVNVER 77
Query: 185 LWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXXPKQPVXXXXXXXXXXXXXXX 364
LW+LV ++ R K A GK PVI+ K P+ P+
Sbjct: 78 LWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLLPETPLIVKARFFSHEAEQKI 134
Query: 365 TDVGGACVLSA 397
GGACVL A
Sbjct: 135 KKAGGACVLVA 145
>AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical
protein Y37E3.8b protein.
Length = 88
Score = 57.6 bits (133), Expect = 4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Frame = +2
Query: 125 MRNFHFXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXX 304
MR FH KN+++CP +N+++LW+LV ++ R K A GK PVI+ K
Sbjct: 1 MRVFHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLL 57
Query: 305 PKQPVXXXXXXXXXXXXXXXTDVGGACVLSA 397
P+ P+ GGACVL A
Sbjct: 58 PETPLIVKARFFSHEAEQKIKKAGGACVLVA 88
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 33.1 bits (72), Expect = 0.088
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 5 GHGRIGKHRKHPGG---RGNAGGEHHHRINMDKYHPG 106
G GR G H + GG RG GG H+ RI + +H G
Sbjct: 8 GPGRGGPHHMNGGGGGRRGGGGGMHNQRIQQNPHHGG 44
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 33.1 bits (72), Expect = 0.088
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 5 GHGRIGKHRKHPGG---RGNAGGEHHHRINMDKYHPG 106
G GR G H + GG RG GG H+ RI + +H G
Sbjct: 8 GPGRGGPHHMNGGGGGRRGGGGGMHNQRIQQNPHHGG 44
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 41 GGRGNAGGEHHH-RINMDK-YHPGYFGKLGMRNFHF 142
GGRG AGG HHH +++++ + + G GM F+F
Sbjct: 115 GGRGGAGGFHHHGNVDVNEIFRRAFGGGGGMGGFNF 150
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 41 GGRGNAGGEHHH-RINMDK-YHPGYFGKLGMRNFHF 142
GGRG AGG HHH +++++ + + G GM F+F
Sbjct: 115 GGRGGAGGFHHHGNVDVNEIFRRAFGGGGGMGGFNF 150
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHR 79
GHG G PGGR GG HHR
Sbjct: 257 GHGGHGSRSGSPGGRHGHGGSGHHR 281
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHR 79
GHG G PGGR GG HHR
Sbjct: 306 GHGGHGSRSGSPGGRHGHGGSGHHR 330
Score = 30.7 bits (66), Expect = 0.47
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRN 133
GHGR G PGGR GG H + PG G+ G R+
Sbjct: 336 GHGRHGSRSGSPGGRHGHGGRHG-----PPHCPGRHGRHGSRS 373
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 30.7 bits (66), Expect = 0.47
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPG 106
HG G H G G GG HHH YH G
Sbjct: 177 HGGGGGGGSHHHGGGGGGGGHHHHGGGGHYHGG 209
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 29.9 bits (64), Expect = 0.82
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +2
Query: 50 GNAGGEHHHRINMDKYHPGYF-----GKLGMRN-FHFXKNKNFCPVLNLDKLW 190
G+ G E HH D YHP F +L + N + F KNK +C D+L+
Sbjct: 282 GDIGVECHHHSTTDTYHPNCFRCETCRQLLVDNIYFFYKNKYYCGRHYADQLY 334
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 0.82
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFH 139
HG G+H P G+ GEHHH H G+ G+ G + H
Sbjct: 455 HGHHGEHHHAPAHHGH-HGEHHHA----PAHHGHHGEHGTHHGH 493
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYH-PGYFGKLGMRNFH 139
HG G+H H G G+ HH + + +H P + G G H
Sbjct: 481 HGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTH 525
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYH-PGYFGKLGMRNFH 139
HG G+H H G G+ HH + + +H P + G G H
Sbjct: 539 HGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSH 583
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFH 139
HG G H P G+ G EHHH +H G+ G G+ + H
Sbjct: 549 HGHHGSHHS-PAHHGHHG-EHHHAPAHHGHH-GHHGSHGVHHGH 589
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAG--GEHHHRINMDKYHPGYFGKLGMRNFH 139
HG G+H P G+ G G HH + P + G G H
Sbjct: 503 HGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTH 548
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYH 100
HG G+H H G G G HH +H
Sbjct: 603 HGHHGEHGVHHGHHGAGYGAHHGHHGAHHHH 633
>AC024817-17|AAU87811.1| 178|Caenorhabditis elegans C-type lectin
protein 80 protein.
Length = 178
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/51 (21%), Positives = 26/51 (50%)
Frame = +2
Query: 119 LGMRNFHFXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPHGKVPVINIVKA 271
LG NF++ ++++ + WT + +T LK+ + + +P N+ +
Sbjct: 105 LGWTNFNYQNSQDYVAESVTNAKWTAYNSETELKFVCSYYPLMPTTNLASS 155
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 268 SWILQVARQRQTPQTTCHXKSKVLLKISREENHGC 372
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 268 SWILQVARQRQTPQTTCHXKSKVLLKISREENHGC 372
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 60 PALPRPPGCLRCFPIRPCP 4
PA P+ P C C P +PCP
Sbjct: 50 PACPQAPSCPVCPPPQPCP 68
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 268 SWILQVARQRQTPQTTCHXKSKVLLKISREENHGC 372
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 268 SWILQVARQRQTPQTTCHXKSKVLLKISREENHGC 372
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical
protein R12E2.10 protein.
Length = 753
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 214 AEVCICSTWQGPRHQYCQSWILQVARQRQ 300
AE+ ICS +GP ++Y +Q RQR+
Sbjct: 613 AEIAICSLLRGPTYKYPVQRAVQFLRQRR 641
>AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical
protein T21E3.1 protein.
Length = 753
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 214 AEVCICSTWQGPRHQYCQSWILQVARQRQ 300
AE+ ICS +GP ++Y +Q RQR+
Sbjct: 613 AEIAICSLLRGPTYKYPVQRAVQFLRQRR 641
>AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical
protein C50D2.1 protein.
Length = 576
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 50 GNAGGEHHHRINMDKYHPGYFGKLGMRNF 136
G+ G HH +++ + GY LG+R+F
Sbjct: 398 GSIGNGHHGKVDFGTWGGGYSDNLGVRDF 426
>Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical
protein B0285.3 protein.
Length = 166
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 20 GKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNF 160
G + P GRG GG N Y G G NF N NF
Sbjct: 15 GNNNWRPQGRGRGGGGWKGNDNRGGYRGGSSNDGGWSNFRDDGNLNF 61
>AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf growth
factor relatedprotein 1 protein.
Length = 304
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 23 KHRKHPGG-RGNAGGEHHHR 79
+ R+H GG RG+ G HHHR
Sbjct: 263 RRRQHHGGPRGHHGHRHHHR 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,233,523
Number of Sequences: 27780
Number of extensions: 186803
Number of successful extensions: 649
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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