Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_J13
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   2.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   3.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   3.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 205 TDEAEVCICSTWQGPRHQYCQSWILQVARQRQTPQT 312
           +DEAE    S   G    + QS I +VAR+ +T  T
Sbjct: 272 SDEAEPSSTSKKSGIVRSHQQSCINRVARETKTAGT 307


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 237 CGADAYFSLVCSETNVQSLSKF 172
           C      SLVC++T +  L+ F
Sbjct: 58  CDMSPLLSLVCADTRLNKLAVF 79


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 250 RHQYCQSWILQVARQRQTPQT 312
           RH   ++W+    R + TPQ+
Sbjct: 241 RHLERKAWVASFGRPKMTPQS 261


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 222 YFSLVCSETNVQSLSKFK 169
           YFS+VC      SL  FK
Sbjct: 11  YFSIVCQAKAHYSLRDFK 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,555
Number of Sequences: 438
Number of extensions: 2329
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)