Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_J12
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1070 + 33872845-33873726 175 4e-44
09_04_0126 + 14874739-14875581 170 1e-42
08_02_0807 + 21411799-21412665 151 7e-37
04_04_1644 + 35015849-35016838 107 1e-23
07_01_0499 - 3738959-3740068 95 6e-20
10_01_0149 + 1745355-1746230 84 1e-16
06_01_0276 + 2035763-2036770 77 1e-14
10_08_0041 - 14374684-14377339,14377371-14378233 68 1e-11
10_01_0124 - 1504521-1505303 67 1e-11
06_03_0342 + 19737951-19738772 67 2e-11
10_08_0032 - 14288522-14290465 65 6e-11
10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020 62 4e-10
10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657 60 3e-09
06_03_0183 + 17642639-17643428,17644507-17644949 52 4e-07
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175 29 3.4
05_06_0118 + 25735966-25737601,25737698-25738488 29 3.4
08_02_0757 + 20840885-20841281,20842937-20843025,20843132-208432... 28 7.9
08_01_0451 + 3979323-3979566,3979649-3980012,3980112-3980330,398... 28 7.9
04_04_0409 + 24992944-24993421,24993920-24994000,24994400-249946... 28 7.9
>02_05_1070 + 33872845-33873726
Length = 293
Score = 175 bits (426), Expect = 4e-44
Identities = 83/154 (53%), Positives = 111/154 (72%), Gaps = 6/154 (3%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I++VW NL EEF +IR VV ++ +VAMDTEFPG+V RP+G FRS ADY Y L+ NVD+
Sbjct: 30 IREVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDM 89
Query: 556 LRIIQLGLTFMDENGKTP---PG--YTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRK 717
L +IQLGLTF G+ P PG WQFNF+ F+ D++A DSI+LL+ SG+ FR+
Sbjct: 90 LHLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRR 149
Query: 718 HEEDGIEPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+ E G++ FAELLMSSG+VL D++ W+ FH+G
Sbjct: 150 NSERGVDARRFAELLMSSGVVLNDSVYWVTFHAG 183
>09_04_0126 + 14874739-14875581
Length = 280
Score = 170 bits (413), Expect = 1e-42
Identities = 79/154 (51%), Positives = 108/154 (70%), Gaps = 6/154 (3%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I++VW NL EF +IR++V + +VAMDTEFPGVV RP+G F+S AD+ Y L+ NVD+
Sbjct: 14 IREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDM 73
Query: 556 LRIIQLGLTFMDENGKTPP-----GYTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRK 717
L++IQLGLTF +E+G P WQFNF+ F+ + D+ A DSIDLL+ SG+ F +
Sbjct: 74 LKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGIDFTR 133
Query: 718 HEEDGIEPLEFAELLMSSGLVLIDNIKWLXFHSG 819
H DG + FAELLMSSG+V+ ++W+ FHSG
Sbjct: 134 HSADGADARRFAELLMSSGVVMNSEVRWVTFHSG 167
>08_02_0807 + 21411799-21412665
Length = 288
Score = 151 bits (366), Expect = 7e-37
Identities = 73/154 (47%), Positives = 101/154 (65%), Gaps = 6/154 (3%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I++VW NL E IR V +Y +VAMDTEFPG+V RP+G FR+T ++ Y L NV++
Sbjct: 18 IREVWAGNLEAEIAAIRDEVDRYPYVAMDTEFPGIVCRPVGNFRTTDEFNYANLEANVNM 77
Query: 556 LRIIQLGLTFMDENGKTPPGYT-----TWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRK 717
L++IQLGLT DE G P T WQFNF+ F+ + D DSI +L+ G+ F +
Sbjct: 78 LKLIQLGLTLSDEGGDLPRRGTGGRRCIWQFNFRGFDPRTDPSNADSIQMLRTCGIDFDR 137
Query: 718 HEEDGIEPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+G +P+ FAELLMSSG+VL +++W+ FHSG
Sbjct: 138 FAAEGADPIRFAELLMSSGVVLNADVQWITFHSG 171
>04_04_1644 + 35015849-35016838
Length = 329
Score = 107 bits (257), Expect = 1e-23
Identities = 60/150 (40%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGE-FRSTADYQYQLLRCNVD 552
I+ VW HN+ EEF+IIR + + +V+MDTEFPGV+ RP TA +Y LLR NVD
Sbjct: 56 IRRVWAHNVEEEFRIIRNAIDHFPYVSMDTEFPGVIHRPTKHPALLTAGDRYDLLRRNVD 115
Query: 553 LLRIIQLGLTFMDENGKTPPGYTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHEED 729
L +IQ+G+T P ++ N F+ + +A +S+ LL G+ H
Sbjct: 116 ALHLIQVGITLAASPTAAPA--LAFEINLSDFDQRVHRHAAESVQLLAEHGVDLAAHRRH 173
Query: 730 GIEPLEFAELLMSSGLVLIDN-IKWLXFHS 816
G+ A LLMSSGLV +KW+ FHS
Sbjct: 174 GVRASALAPLLMSSGLVCSHGAVKWVTFHS 203
>07_01_0499 - 3738959-3740068
Length = 369
Score = 95.1 bits (226), Expect = 6e-20
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 8/137 (5%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIG-EFRSTADYQYQLLRCNVD 552
++ VW HNL EE +I + + A+DTEFPG V RP + T +Y LL+ NVD
Sbjct: 94 VRSVWAHNLDEEANLIESLFPSFRLAAVDTEFPGTVHRPSAPAYTLTRKQKYALLKKNVD 153
Query: 553 LLRIIQLGLTFMDENGKTPPGYT------TWQFNFK-FNLQEDMYAQDSIDLLQNSGLQF 711
L ++QLGLT D G+ P T W+FNF+ F+L+ +A +SI LL++ G+ F
Sbjct: 154 ELHLVQLGLTLFDAGGRLPDLGTGGAARYVWEFNFREFDLRRHAHAPESIALLRSKGVDF 213
Query: 712 RKHEEDGIEPLEFAELL 762
+ G++ F L
Sbjct: 214 DRTRRGGVDAAAFGPRL 230
>10_01_0149 + 1745355-1746230
Length = 291
Score = 83.8 bits (198), Expect = 1e-16
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Frame = +1
Query: 397 NLHEEFQIIRQVVQKYHWVAMDTEFPGVV-ARPIGEFRSTADYQYQLLRCNVDLLRIIQL 573
NLH E +IR ++ + +VA+DT+FPGVV P G TAD +Y +R N D L ++QL
Sbjct: 40 NLHREMSLIRSLMPTFPFVAVDTQFPGVVHPHPRGA-GVTADDRYAAVRANADELCLLQL 98
Query: 574 GLTFMDENGKTPPGYT----TWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 738
G+T +G+ P W F+F F+ + +A +S+ L+ G F G+
Sbjct: 99 GITLSAADGRLPVDGALVEFMWDFDFAGFDARYHRHAPESVQFLRAQGFDFEAARLAGVP 158
Query: 739 PLEFAELLMSSGLVLIDNIKWLXF 810
L FA L +SG++ + + W+ F
Sbjct: 159 ALAFAAELAASGILGLRGVTWVAF 182
>06_01_0276 + 2035763-2036770
Length = 335
Score = 77.4 bits (182), Expect = 1e-14
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGV---VARPIGEFRSTADYQYQLLRCN 546
++DVW NL EE + I ++ Y V+MDTEFPG VA P T Y +++ N
Sbjct: 72 VRDVWAANLEEELRSIGALLPTYPVVSMDTEFPGTVHDVATP--RHLRTPRESYAVVKRN 129
Query: 547 VDLLRIIQLGLTFMDENGKTPPGYTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHE 723
VD L ++QLGL G+ P WQFNF F+ + D ++ S+ +L G+ F
Sbjct: 130 VDELHLLQLGLALSGPAGRCP---VAWQFNFAGFDARRDPHSGSSVAMLAAHGVDFTALR 186
Query: 724 EDGIEPLEFAELLMSSGLVLIDNIKWLXF 810
GI+ +FA S L + W F
Sbjct: 187 RHGIDHGDFARAFGRSKLA-CGRLTWAAF 214
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 67.7 bits (158), Expect = 1e-11
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYH---WVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 546
++ VW N E+F+++ + + + H ++A+D EF A + T+ YQ +R
Sbjct: 648 VQSVWRENCMEQFKLVLEALHQPHRHLYIAVDMEFAADAATNVSHRPVTSISCYQHMRRY 707
Query: 547 VDLLRIIQLGLTF--MDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKH 720
V+ I Q+GLTF + E + P + NF FN+ Y SID L + G +H
Sbjct: 708 VNGGGIFQMGLTFAFVGEGEQAPSPLIALEINFDFNVNSPKYHGKSIDFLSSQGHDLTQH 767
Query: 721 EEDGIEPLEFAELLMSSGLVLID-NIKWLXFH 813
+ G+ P EF + L D ++ W+ FH
Sbjct: 768 SKRGVAP-EFVYEGLLRHLPFGDGSVTWVAFH 798
>10_01_0124 - 1504521-1505303
Length = 260
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Frame = +1
Query: 397 NLHEEFQIIRQVVQKYHWVAMDTEFPGVVARP-IGEFRSTADYQYQLLRCNVDLLRIIQL 573
NL E +I +++ +Y +V +D EF GVV P R T D Y L+ NVD + +Q+
Sbjct: 5 NLDSEMGLIGEMMVQYPYVTIDVEFAGVVHHPPYTGSRPTPDEIYAALKSNVDEVPAVQI 64
Query: 574 GLTFMDENGKTPPGYTT-------WQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHEED 729
G+T D G P ++ W+ F F+ D + DS++ L+N G+ F +
Sbjct: 65 GITLSDAEGNLPTRSSSSPEQEIAWEVVFSDFDAGRDPHVVDSVEFLKNQGIDFDLARQI 124
Query: 730 GIEPLEFAELLMS 768
G+ F E L++
Sbjct: 125 GVTSTAFGEKLLA 137
>06_03_0342 + 19737951-19738772
Length = 273
Score = 66.9 bits (156), Expect = 2e-11
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVV---ARPIGEFRS----TADYQYQL 534
++ VW N E I+R V + A++ ++PG V A G+ R TA+ +YQ+
Sbjct: 5 VRSVWADNFAAESAILRAVAPCAVYAAINVQYPGCVVSAAGGAGDHRCYYDLTAEERYQV 64
Query: 535 LRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNF-KFNL--QEDMYAQDSIDLLQNSGL 705
+R N D L+ +QLGL +G G W+FN +F+L DM S+D L++ G+
Sbjct: 65 VRANADELKPLQLGLAVRTADG----GRFAWEFNLNEFDLAADGDMCEPGSVDYLRHRGM 120
Query: 706 QFRKHEEDGIEPLEFAELLMSSGLVLIDNIKWLXF 810
F G+ LL SSGL L W F
Sbjct: 121 DFNALPWSGVGAASLGRLLWSSGL-LAARPSWATF 154
>10_08_0032 - 14288522-14290465
Length = 647
Score = 65.3 bits (152), Expect = 6e-11
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVV---QKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 546
+K VW N E+F+++ + +++ ++A+D EF I T+ Y LR
Sbjct: 158 VKSVWRENYREQFKLVVDALHQPRRHLYIAVDMEFAADATTNIRRRPVTSTGCYHHLREF 217
Query: 547 VDLLRIIQLGLTFMDENG------KTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQ 708
V+ I+Q+GL F+ G + P T + NFK N++ Y + SI L G
Sbjct: 218 VNRGDIVQMGLAFVFVGGGEQSSSSSSPPPITLEINFKINIKARKYNKKSIAFLSRQGHD 277
Query: 709 FRKHEEDGIEPLEFAELLMSSGLVLID--NIKWLXFHS 816
R+H G+ P F E L+ L D ++ WL +HS
Sbjct: 278 LREHRRRGVSPRRFYEGLLRH-LPFGDGRSVTWLAYHS 314
>10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020
Length = 722
Score = 62.5 bits (145), Expect = 4e-10
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYH---WVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 546
++ VW N E+F+++ + + + H ++A+D EF A + T+ YQ +R
Sbjct: 329 VQSVWQENCMEQFKLVLEALHQPHRNLYIAVDMEFTADAATNMSHRPVTSTSCYQHVRRY 388
Query: 547 VDLLRIIQLGLTFM---DENGKTPPGYT-TWQFNFKFNLQEDMYAQDSIDLLQNSGLQFR 714
V+ I+Q+GLTF D G+ P + NF FN+ Y +SI L + G
Sbjct: 389 VNGGDIVQMGLTFAFVGDVEGEQAPSPPIALEINFDFNVNSPKYHGESIHFLSSQGHDLT 448
Query: 715 KHEEDGIEPLEFAELLMSSGLVLID-NIKWLXFH 813
+H + G+ P EF + L D ++ W+ +H
Sbjct: 449 QHSKRGVTP-EFVYEGLLRHLPFGDGSVTWVAYH 481
>10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657
Length = 1032
Score = 59.7 bits (138), Expect = 3e-09
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVV---QKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 546
+K VW N E+F+++ + +++ ++A+D EF I T+ Y LR
Sbjct: 553 VKSVWRENYREQFKLVVDALNQPRRHLYIAVDMEFAADATTNIRRRPVTSTGCYHHLREF 612
Query: 547 VDLLRIIQLGLTFM------DENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQ 708
V+ I+Q+GLTF+ + + P T + NFK N++ Y + SI L G
Sbjct: 613 VNRGDIVQMGLTFVFVGDGEQSSSSSSPPPITLEINFKINIKARKYNKKSIAFLSRQGHD 672
Query: 709 FRKHEEDGIEP 741
R+H G+ P
Sbjct: 673 LREHRRRGVSP 683
>06_03_0183 + 17642639-17643428,17644507-17644949
Length = 410
Score = 52.4 bits (120), Expect = 4e-07
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIG-----EFRS-TADYQYQLL 537
I VW+ N E + V + VA+ ++PG G ++ S TA+ +Y ++
Sbjct: 17 IHSVWHDNFDAESAQLLAVAPRAVHVAVSVQYPGCAVAQAGTSGRKKYGSLTAEKRYDMV 76
Query: 538 RCNVDLLRIIQLGLTFMDENGKTPPG-YTTWQFN---FKFNLQEDMYAQDSIDLLQNSGL 705
+ N+D L IQ+GL + G ++FN F N D+ SI L+ G+
Sbjct: 77 KANIDELHPIQVGLAIRANDDDGDSGELVVFEFNLRGFDINNPADLRDPASIAHLRGRGV 136
Query: 706 QFRKHEEDGIEPLEFAELLMSSGLV 780
F + G+EP LL+ SGL+
Sbjct: 137 DFGRLPCAGVEPHRLRLLLLGSGLL 161
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 472 PGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENG 600
PG RP + TA+ +Y +L+ NVD LR IQ+GL +G
Sbjct: 297 PGGEPRPFEQL--TAEQRYGVLKANVDALRAIQVGLAIRTGDG 337
>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
Length = 294
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 310 KRYKMPSASFGSIS--LPGGSDCGIKDVWNHNLHEEF 414
K Y +S+ +I+ LPG +D +K+ WN L + F
Sbjct: 70 KMYSKKGSSWSAIAAQLPGRTDLAVKNYWNSTLKKRF 106
>05_06_0118 + 25735966-25737601,25737698-25738488
Length = 808
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = -2
Query: 440 FWTTCLIIWNSSCKL*FQTSFIPQSLPPGSDMEPKLADGILYRLSVSK----REELSVFF 273
++ TC IIW+ S Q +P P +DM P DG+LY +S + E VFF
Sbjct: 579 YYLTC-IIWSCSS----QGQPLPDPPLPVNDMPPVSLDGVLYWMSEPRLGQSYERAIVFF 633
Query: 272 D--AVVFDL 252
+ A +FD+
Sbjct: 634 NIAAKIFDV 642
>08_02_0757 +
20840885-20841281,20842937-20843025,20843132-20843257,
20843617-20844333,20844420-20844630,20844739-20845238,
20845998-20846023,20846393-20846531,20846579-20846660,
20846990-20847153
Length = 816
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 244 TQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISL 354
T+ S + ++K + ETD + +PSA+FGS SL
Sbjct: 346 TKGASSSDGAQKRKRDAFSETDPQQCVPSAAFGSDSL 382
>08_01_0451 +
3979323-3979566,3979649-3980012,3980112-3980330,
3980713-3980872,3981680-3981817,3982161-3982448
Length = 470
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 424 RQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQ 531
+ +V++Y + + TE P +VA I + TADY Y+
Sbjct: 414 KDIVKEY--LTLPTEQPKIVAETIVDLARTADYMYK 447
>04_04_0409 +
24992944-24993421,24993920-24994000,24994400-24994622,
24994709-24994850,24995166-24995555
Length = 437
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 365 LPPGSDMEPKLADGILYRLSVSKREELSVFFDAVVFDLFCVF*TN*APVLGLLKHPLQV 189
+ PGS L++ L + + R+ L + + FD +C N P+L ++P QV
Sbjct: 281 IAPGSPSSTLLSEQKLRGVIENARQILKIVEEFGTFDKYCWSFVNNKPILSRFRYPRQV 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,329,062
Number of Sequences: 37544
Number of extensions: 437276
Number of successful extensions: 1156
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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