Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_J12
(828 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription ... 243 7e-64
BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription ... 243 7e-64
AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein. 243 7e-64
BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription ... 241 2e-63
BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein. 241 2e-63
AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor ... 239 9e-63
BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription ... 239 1e-62
BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein. 239 1e-62
AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein. 239 1e-62
AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens ... 237 3e-62
L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1 pro... 231 3e-60
AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein. 227 4e-59
BC064574-1|AAH64574.1| 851|Homo sapiens LOC150763 protein protein. 33 1.7
AK131197-1|BAD18392.1| 616|Homo sapiens 5). protein. 33 1.7
AK122580-1|BAC56921.1| 233|Homo sapiens FLJ00202 protein protein. 33 1.7
S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protei... 30 8.9
D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protei... 30 8.9
BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding prot... 30 8.9
AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding prot... 30 8.9
AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding prot... 30 8.9
>BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 243 bits (594), Expect = 7e-64
Identities = 111/148 (75%), Positives = 129/148 (87%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI+LL SG+QF+KHEE+GI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
E FAELLM+SG+VL + +KWL FHSG
Sbjct: 132 ETQYFAELLMTSGVVLCEGVKWLSFHSG 159
>BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 243 bits (594), Expect = 7e-64
Identities = 111/148 (75%), Positives = 129/148 (87%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI+LL SG+QF+KHEE+GI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
E FAELLM+SG+VL + +KWL FHSG
Sbjct: 132 ETQYFAELLMTSGVVLCEGVKWLSFHSG 159
>AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein.
Length = 285
Score = 243 bits (594), Expect = 7e-64
Identities = 111/148 (75%), Positives = 129/148 (87%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI+LL SG+QF+KHEE+GI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
E FAELLM+SG+VL + +KWL FHSG
Sbjct: 132 ETQYFAELLMTSGVVLCEGVKWLSFHSG 159
>BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 246
Score = 241 bits (591), Expect = 2e-63
Identities = 111/148 (75%), Positives = 128/148 (86%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI+LL SG+QF+KHEE+GI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
E FAELLM SG+VL + +KWL FHSG
Sbjct: 132 ETQYFAELLMISGVVLCEGVKWLSFHSG 159
>BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein.
Length = 246
Score = 241 bits (591), Expect = 2e-63
Identities = 111/148 (75%), Positives = 128/148 (86%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI+LL SG+QF+KHEE+GI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
E FAELLM SG+VL + +KWL FHSG
Sbjct: 132 ETQYFAELLMISGVVLCEGVKWLSFHSG 159
>AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor 1
protein.
Length = 292
Score = 239 bits (585), Expect = 9e-63
Identities = 108/148 (72%), Positives = 125/148 (84%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVPSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSIDLL NSGLQF+KHEE+GI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+ L FAELLM+SG+VL DN+KWL FHSG
Sbjct: 132 DTLHFAELLMTSGVVLCDNVKWLSFHSG 159
>BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription
complex, subunit 8 protein.
Length = 292
Score = 239 bits (584), Expect = 1e-62
Identities = 108/148 (72%), Positives = 125/148 (84%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSIDLL NSGLQF+KHEE+GI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+ L FAELLM+SG+VL DN+KWL FHSG
Sbjct: 132 DTLHFAELLMTSGVVLCDNVKWLSFHSG 159
>BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein.
Length = 292
Score = 239 bits (584), Expect = 1e-62
Identities = 108/148 (72%), Positives = 125/148 (84%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSIDLL NSGLQF+KHEE+GI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+ L FAELLM+SG+VL DN+KWL FHSG
Sbjct: 132 DTLHFAELLMTSGVVLCDNVKWLSFHSG 159
>AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein.
Length = 292
Score = 239 bits (584), Expect = 1e-62
Identities = 108/148 (72%), Positives = 125/148 (84%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSIDLL NSGLQF+KHEE+GI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+ L FAELLM+SG+VL DN+KWL FHSG
Sbjct: 132 DTLHFAELLMTSGVVLCDNVKWLSFHSG 159
>AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21705 fis, clone COL09940. ).
Length = 292
Score = 237 bits (581), Expect = 3e-62
Identities = 107/148 (72%), Positives = 125/148 (84%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSIDLL NSGLQF+KHEE+GI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+ L FAELLM+SG+VL DN++WL FHSG
Sbjct: 132 DTLHFAELLMTSGVVLCDNVRWLSFHSG 159
>L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1
protein.
Length = 262
Score = 231 bits (564), Expect = 3e-60
Identities = 104/133 (78%), Positives = 120/133 (90%)
Frame = +1
Query: 421 IRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENG 600
IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDLL+IIQLGLTFM+E G
Sbjct: 4 IRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQG 63
Query: 601 KTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEPLEFAELLMSSGLV 780
+ PPG +TWQFNFKFNL EDMYAQDSI+LL SG+QF+KHEE+GIE FAELLM+SG+V
Sbjct: 64 EYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVV 123
Query: 781 LIDNIKWLXFHSG 819
L + +KWL FHSG
Sbjct: 124 LCEGVKWLSFHSG 136
>AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein.
Length = 292
Score = 227 bits (555), Expect = 4e-59
Identities = 104/148 (70%), Positives = 121/148 (81%)
Frame = +1
Query: 376 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 555
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 556 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGI 735
L+IIQLGLTF +E G+ P G TWQFN K L DMY+QDSIDLL NSGLQF+KHEE+GI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNCKLYLTVDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query: 736 EPLEFAELLMSSGLVLIDNIKWLXFHSG 819
+ L FAELLM+SG+VL DN+KWL FHSG
Sbjct: 132 DTLHFAELLMTSGVVLCDNVKWLSFHSG 159
>BC064574-1|AAH64574.1| 851|Homo sapiens LOC150763 protein protein.
Length = 851
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 403 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLT 582
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 471 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 530
Query: 583 FMDENGKTPPGYT 621
+ + G PG T
Sbjct: 531 VVPQPG---PGLT 540
>AK131197-1|BAD18392.1| 616|Homo sapiens 5). protein.
Length = 616
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 403 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLT 582
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 289 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 348
Query: 583 FMDENGKTPPGYT 621
+ + G PG T
Sbjct: 349 VVPQPG---PGLT 358
>AK122580-1|BAC56921.1| 233|Homo sapiens FLJ00202 protein protein.
Length = 233
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 403 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLT 582
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 48 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 107
Query: 583 FMDENGKTPPGYT 621
+ + G PG T
Sbjct: 108 VVPQPG---PGLT 117
>S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protein
protein.
Length = 560
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 232 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 411
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 412 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 504
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protein
protein.
Length = 560
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 232 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 411
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 412 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 504
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 232 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 411
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 412 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 504
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 232 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 411
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 412 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 504
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 232 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 411
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 412 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 504
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,473,003
Number of Sequences: 237096
Number of extensions: 2536210
Number of successful extensions: 4513
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4512
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -