Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_J03
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   3.3  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 249  LASQFIAKFFNSFPTLSEQAIEAQFDLC 332
            L  QF+A  F+ F T++      + +LC
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 249  LASQFIAKFFNSFPTLSEQAIEAQFDLC 332
            L  QF+A  F+ F T++      + +LC
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 249  LASQFIAKFFNSFPTLSEQAIEAQFDLC 332
            L  QF+A  F+ F T++      + +LC
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 249  LASQFIAKFFNSFPTLSEQAIEAQFDLC 332
            L  QF+A  F+ F T++      + +LC
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 138 LYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKE-KRLASQFIAKFF 278
           LY NY +    +DE+SQ  ++Y   L   K S K  + L + F  + F
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKY--YLGEKKLSKKTFRELVAMFSDRIF 397


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 138 LYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKE-KRLASQFIAKFF 278
           LY NY +    +DE+SQ  ++Y   L   K S K  + L + F  + F
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKY--YLGEKKLSKKTFRELVAMFSDRIF 397


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 138 LYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKE-KRLASQFIAKFF 278
           LY NY +    +DE+SQ  ++Y   L   K S K  + L + F  + F
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKY--YLGEKKLSKKTFRELVTMFSDRIF 397


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 138 LYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKR-LASQFIAKFF 278
           LY NY +    +DE+SQ  ++Y   L   K S K  R L + F  + F
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKY--YLGEKKLSKKTFRDLVAMFSDRIF 397


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 138 LYKNYDILAAAKDEISQHEKEY 203
           LY NY +    +DE+SQ  ++Y
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKY 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,823
Number of Sequences: 336
Number of extensions: 3100
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)