Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_J01
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77652-7|CAB01119.1|  341|Caenorhabditis elegans Hypothetical pr...    35   0.090
AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical ...    31   1.5  
Z77652-6|CAB01122.1|  357|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z68748-7|CAJ85749.1|   80|Caenorhabditis elegans Hypothetical pr...    30   2.6  

>Z77652-7|CAB01119.1|  341|Caenorhabditis elegans Hypothetical
           protein C06B3.10 protein.
          Length = 341

 Score = 34.7 bits (76), Expect = 0.090
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 139 FISYWYXRYLLATELYMVETWER--IVIHIVFGILFGLFWFFNYYITISA 282
           F  ++  RYL     Y ++ ++R  I+  + F ++FGL WF+  + T++A
Sbjct: 103 FAVHFVYRYLTVIGSYYIKNYDRQIIITLMTFPVIFGLVWFWMTHFTLTA 152


>AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.21 protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 231 NTFWIILVLQLLHHDISHITTAGESRDHSVMNGDIVI 341
           N F I+ V + LH  +SH+T++G  R H    G +V+
Sbjct: 410 NDFGIVTVEESLHQLVSHMTSSGLYRFHDTPLGALVV 446


>Z77652-6|CAB01122.1|  357|Caenorhabditis elegans Hypothetical
           protein C06B3.9 protein.
          Length = 357

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
 Frame = +1

Query: 139 FISYWYXRYLLATELYMVETWERIVIH--IVFGILFGLFWFF--NYYIT 273
           F  ++  RY++ +E   ++ ++  VI   ++  +LFG+FWF+  +Y++T
Sbjct: 104 FAIHFIYRYMVVSENKYLKKYDAHVISFLLILPLLFGVFWFWVVDYFLT 152


>Z68748-7|CAJ85749.1|   80|Caenorhabditis elegans Hypothetical
           protein F13H10.8 protein.
          Length = 80

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 139 FISYWYXRYLLATELYMVETWERIVIHIVFGILFGLFWFFN 261
           F  + Y +YLL + +YM+E WE+ + + V  I+F L  F +
Sbjct: 35  FAEHVYLQYLLVSGIYMLEPWEQRLFNWV--IIFVLTTFIS 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,273,290
Number of Sequences: 27780
Number of extensions: 397711
Number of successful extensions: 984
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)