Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I24
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical ...   158   5e-39
Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical pr...    32   0.51 
Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical pr...    32   0.51 
Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    29   4.8  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    29   4.8  
AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine re...    29   4.8  

>AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical
           protein Y74C10AL.2 protein.
          Length = 157

 Score =  158 bits (383), Expect = 5e-39
 Identities = 75/155 (48%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
 Frame = +2

Query: 149 CFENISMPSCVWFESGEKRNILASILAGLLFFAGWWFIIDAASVYPGD-LPNAAHVCGVM 325
           CF+ I   +C  F+   +RN +AS+++  LFF GWW +ID A+V   +   N   +  V 
Sbjct: 4   CFDQIRC-NCS-FDLEGRRNAVASVVSAALFFIGWWLMIDTAAVTNKENWTNVYFIITVA 61

Query: 326 ATLSMIMVNSVSNAQVRGETYTGGCMGPRGARLWLFLGFVVGFASLIAACWILFANYVNA 505
           +T++M MVN++SN+QVRGE+   G +G +G+RLWL   FVV FASL+AA WILF++YV  
Sbjct: 62  STVAMFMVNAISNSQVRGESLHEGLLGTKGSRLWLMAAFVVSFASLVAATWILFSDYVLI 121

Query: 506 SSSKHAWPGVGLFMQNAFIFAGSLVFKFGRTEDLW 610
             S   WPGV LF+ N  IFA S V+KFGRTE++W
Sbjct: 122 QGSHSVWPGVALFLTNFIIFASSCVYKFGRTEEMW 156


>Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 534 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 370
           T  +A LE + LT   KS  Q+       AKPT  P  S++  P  P   P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297


>Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 534 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 370
           T  +A LE + LT   KS  Q+       AKPT  P  S++  P  P   P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297


>Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical
           protein ZK822.5a protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 401 MGPRGARLWLFLGFVVGFASLIAACWI 481
           M  RGA++WL   FV+G AS I  C++
Sbjct: 81  MFQRGAQIWL--NFVIGVASSIVTCFV 105


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 483 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 364
           +++  A   A P T P  S+S  APR     P    P+TCA
Sbjct: 39  TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 79


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 483 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 364
           +++  A   A P T P  S+S  APR     P    P+TCA
Sbjct: 168 TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 208


>AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein9 protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 94  SILKCSRCNFNPFCSFVNSFI*LTNKSH 11
           S+L+C +C+F  FC F   F  + N  H
Sbjct: 44  SVLQCFQCSFQTFCLFGTLFDGIINLGH 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,756,683
Number of Sequences: 27780
Number of extensions: 389013
Number of successful extensions: 1081
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)