Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_I24
(766 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 26 0.33
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 26 0.33
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 25 0.77
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 24 1.8
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 4.1
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 23 4.1
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 4.1
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 5.4
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 5.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 5.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 5.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 7.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 7.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 9.5
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 26.2 bits (55), Expect = 0.33
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 421 TLALPWIRCWFCV 459
TLA+ WI C+FC+
Sbjct: 212 TLAVVWIMCYFCI 224
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 26.2 bits (55), Expect = 0.33
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 421 TLALPWIRCWFCV 459
TLA+ WI C+FC+
Sbjct: 265 TLAVVWIMCYFCI 277
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 25.0 bits (52), Expect = 0.77
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 421 TLALPWIRCWFCV 459
TL L WI C+FC+
Sbjct: 179 TLLLVWILCYFCI 191
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 728 LIKTKSPHFIIRKRLIITDTSWSIFN 651
L+K +S + KRLI D W ++N
Sbjct: 14 LLKKRSENDPFLKRLITGDEKWVVYN 39
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 4.1
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = -1
Query: 625 ILSLRPKILSASELKHERSSENEGILHEQTHSRPGVFGGTSINIVRKEYPAGSNEGRKTN 446
+++ R + L A+E ++ R N +L E+ S N V + P+ E T+
Sbjct: 224 VIASRHRNLEATESENVRPRRN--VLIERAKSIRARRTECVTNSVTCDRPSDEAEPSSTS 281
Query: 445 NESKEEPKSGTTRSHATTCV 386
KSG RSH +C+
Sbjct: 282 K------KSGIVRSHQQSCI 295
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 728 LIKTKSPHFIIRKRLIITDTSWSIFN 651
L+K ++ + KRLI D W ++N
Sbjct: 135 LLKKRNENDPFLKRLITGDEKWVVYN 160
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3
Query: 345 WSIRCQMHRFVEKHTQVVAW 404
+ + C +HR H Q +AW
Sbjct: 542 YCVACGLHRDTYIHAQQIAW 561
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 404 GPRGARLWLFLGFVVGFASLIAACWILFANYVN 502
GPR W+ + AS++ C I Y++
Sbjct: 94 GPRFCDTWIAFDVMCSTASILNLCAISLDRYIH 126
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
Frame = -1
Query: 76 RCNFNPFC--SFVNSFI 32
RCNF +C SF+N+ +
Sbjct: 142 RCNFKAYCLFSFLNTIV 158
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 234 CCFSQDGGL 260
CCF+QD GL
Sbjct: 446 CCFAQDDGL 454
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.2 bits (45), Expect = 5.4
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 188 ESGEKRNILASILAGLLFFAGWWFIIDAASVYPGDLPNAAHVCGVMATLSMIMV 349
+SGEK ++ +SIL L F F++ A + P L A + G +MI+V
Sbjct: 276 DSGEKVSLCSSILLSLTVF----FLLLAEIIPPTSL--AIPLLGKYLLFTMILV 323
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
Frame = +1
Query: 316 WS--DGHPVND 342
WS DGHPVND
Sbjct: 64 WSTADGHPVND 74
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
Frame = +1
Query: 316 WS--DGHPVND 342
WS DGHPVND
Sbjct: 64 WSTADGHPVND 74
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 452 FASLIAACWILFANYV 499
FA L WI+FA Y+
Sbjct: 413 FAVLNVTYWIMFAEYI 428
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/30 (23%), Positives = 11/30 (36%)
Frame = +1
Query: 367 TGSWRNIHRWLHGTAWCQTLALPWIRCWFC 456
+ +W W+ G WC + W C
Sbjct: 122 SATWEVFKVWIFGDLWCSIWLA--VDVWMC 149
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 503 ASSSKHAWPGVGLFMQNAFIFAGSLVFKFGR 595
ASS + G+ F+ +AF+F + +F G+
Sbjct: 38 ASSLQQRRGGLEYFLLSAFLFGANALFTPGQ 68
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,162
Number of Sequences: 438
Number of extensions: 5148
Number of successful extensions: 36
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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