Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I21
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   2.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.3  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   8.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   8.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   8.3  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 387 NFKDPKIILINFFAHIFERNLFC*CKFVIFKTKYISFFQSNHKSSMY 527
           NF     ILIN+F  ++  +L    +F I   K +   +  ++ S Y
Sbjct: 10  NFPSTSFILINYFIFLYFNSLVRFRRFTIELDKVLESPRGKYEFSKY 56


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 114 FCKMGNIKCKRVKITQSEPVAEETNNERIRTLKTDVSDVN 233
           FC + N+K K ++I   +     T +     +KT +S+ +
Sbjct: 203 FCNLENVKLKELRIILEDIKHINTRHNTKNGMKTLLSETD 242


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -2

Query: 90  SLFNN-ITVLINFDKY 46
           SLF N + + INFDKY
Sbjct: 164 SLFENGVEIGINFDKY 179


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
          protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 84 FNNITVLINFDKY 46
          FNN+   INFD++
Sbjct: 3  FNNVIKYINFDRF 15


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 746 IFVINYFNQLFIIEASHC 799
           IFVI++F     I  SHC
Sbjct: 62  IFVISFFGCCGAIRESHC 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,379
Number of Sequences: 438
Number of extensions: 5295
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)