Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_I20
(842 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 33 0.038
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 31 0.27
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 30 0.47
SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4 desaturase... 29 0.62
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.9
SPBC27.01c |||secretory pathway protein Pga2 |Schizosaccharomyce... 27 3.3
SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|ch... 27 3.3
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 4.4
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 27 4.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 4.4
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 26 5.8
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 26 5.8
SPAC23H3.03c |||nitrogen permease regulator family|Schizosacchar... 26 5.8
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 26 5.8
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.7
SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 7.7
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 33.5 bits (73), Expect = 0.038
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = +1
Query: 364 GSYFCYDT---PGALV--DNFKDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGV 528
G F YDT GALV LT + S S ++ I G L D +FG
Sbjct: 98 GLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALAD-FFGR 156
Query: 529 RLGTVIYMTIVFIGAVIFASGVYINTYWLMILGRFVFGIGGESLQVVVNNYV 684
+ I I+ +G+++ + ++ W MI+GRFV G G +++ Y+
Sbjct: 157 KPVIAIASIIIIVGSIVQVTAHHL---WHMIVGRFVIGWGVGIASLIIPLYL 205
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 30.7 bits (66), Expect = 0.27
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 238 VMDNPEASGSSRTPQISPTSWRHPANRIHRFIALLLMCFLCFGSYFCYDTPGALVDNFKD 417
++ NP+ +GSS +S + I RF+ LLL+ FLCF + TP A + +
Sbjct: 689 MLTNPDDAGSSNRFSMSVLPISPSLHSILRFL-LLLLAFLCFAMHILL-TPEATLRKWAS 746
Query: 418 DTHLT 432
+L+
Sbjct: 747 SIYLS 751
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 29.9 bits (64), Expect = 0.47
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 571 AVIFASGVYINTYWLMILGRFVFGIGGESLQVVVNNYVVLWFKGKELNMVFGLQLSFSRF 750
A + +SG + TY +M G F++G+GG ++Q+ + ++ + K K + F RF
Sbjct: 69 ATLLSSGAWSYTYGIM--GGFMYGVGG-TIQITLFLFLAIQIKKKAPAAHTVSECFFIRF 125
Query: 751 G 753
G
Sbjct: 126 G 126
>SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4
desaturase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 362
Score = 29.5 bits (63), Expect = 0.62
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +1
Query: 448 LLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASGVYINTYWLMILG 627
L +++ + N+I+ F YLV RY G R +M+ G++ +G +++ ++ M
Sbjct: 199 LPFTLMHFWNIIVQFSFDYLVVRYVGWRALAYFFMSSFLAGSLHPTAGHFLSEHYNMTRT 258
Query: 628 RFVFGIGGESLQVVVNNY 681
R + G+ + +Y
Sbjct: 259 RLIASGPGKETPLETFSY 276
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Frame = -1
Query: 734 NCSPNT--MFSSFPLNHRXXXXXXXTCNDSPPIPNTNLPSIISQYVF------I*TPLAN 579
NC+ +T +++S P+ C S +P T+ P S Y TP+
Sbjct: 531 NCTTSTSVLYTSTPVTSTPLATTN--CTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTT 588
Query: 578 MTAPIKTMVMYITVPNLTPKYLSTKYPPIKHNIT 477
T V+Y + P +P S+ + N T
Sbjct: 589 TNCTTSTSVLYTSTPITSPNSTSSSSTQVSWNST 622
>SPBC27.01c |||secretory pathway protein Pga2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 132
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 454 YSIYSWPNVILCFIGGYLVDRYFGVRLGTVI 546
YS+ W +I+ ++GGY++ R + ++LG I
Sbjct: 12 YSLKDWIRIIV-YVGGYMLIRPYLMKLGAKI 41
>SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 522
Score = 27.1 bits (57), Expect = 3.3
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
Frame = +1
Query: 310 ANRIHRFIALLLMCFLCFGSYFCYDTPGAL----VDNFKDDTHLTTSQFTLLYSIYSWPN 477
A R+ I L++M +C Y AL + K DTH+ ++ + +++
Sbjct: 66 ARRVLWKIDLVMMPVMCITYMIQYLDKTALSYAALYGMKTDTHIDGHTYSSMTTLFYAGY 125
Query: 478 VILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASGVYINTYWLMILGRFVFGIGGES 657
++ + L+ + RL I+ + A++ N L+ L RF+ GI S
Sbjct: 126 LVAQYPAAILMQK---CRLSYFIFCNVFLWSAMVCLMAACRNGPSLLGL-RFLAGIFEAS 181
Query: 658 LQVVVNNYVVLWFKGKELNM 717
+ N +W++ +E M
Sbjct: 182 ITPAFINITAMWYRREEQPM 201
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 694 FKGKELNMVFGLQLSFSRFGSTVNFXIME-PIYRWI 798
+K +EL ++FG + +SR+ T N E PI R++
Sbjct: 894 YKTRELYLMFGRLMIYSRYDKTRNMKFAEKPIPRFL 929
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 415 DDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRY-FG--VRLGTVIYMTIVFIGAVIFA 585
DD H+T++Q+ L +++ ++ F G Y++ + G V L T + IVF+ +
Sbjct: 130 DDVHITSNQYNNLNTLFYVGYIVGQFPGHYIMQTFPLGKFVGLVTFSWSVIVFLHCCAYN 189
Query: 586 SG 591
G
Sbjct: 190 YG 191
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 694 FKGKELNMVFGLQLSFSRFGSTVNFXIME-PIYRWI 798
+K +EL ++FG + +SR+ T N E PI R++
Sbjct: 894 YKTRELYLMFGRLMIYSRYDKTRNMKFAEKPIPRFL 929
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 307 PANRIHRFIALLLMCFLC 360
P+N R IALLL C++C
Sbjct: 954 PSNFYKRLIALLLFCWIC 971
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 421 THLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYF 522
TH++ ++ LL S+ V+LC IG V+R +
Sbjct: 763 THISKTRSLLLDSLSQQSKVLLCKIGNAAVNRVY 796
>SPAC23H3.03c |||nitrogen permease regulator
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 11 MIFFFYESETESVYIPCFKVLTRNV 85
M F+E E + YIP K L RN+
Sbjct: 105 MCMIFHEEEDSACYIPLVKRLARNL 129
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 544 IYMTIVFIGAVIFASGVYINTYWLMILGRFVFGIGGESLQVVVNNYVVLWFKGKELNMVF 723
I +TI +GA G + RF G+ L + Y+ W++GK L
Sbjct: 163 IQLTIGVVGACHAVLGTKHGNAQSYVALRFFLGVAESGLWPGLAYYMSRWYRGKHLGKRI 222
Query: 724 G 726
G
Sbjct: 223 G 223
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 426 FDNFPVYFALFYIFMAQCYIMLYWWILS 509
F +FP+ LF+ F+ C + + + LS
Sbjct: 147 FSSFPILHFLFFFFLCVCVFLSFLFSLS 174
>SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 7.7
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 445 TLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASGVYINTYWLMIL 624
TL+ I+ +P +LCF + Y V+ G +++ N +L+++
Sbjct: 132 TLISLIFLYP--MLCFANPKSANGYTLYFRPMVVSSFAHIFGHLLYCMAYRANWIYLILI 189
Query: 625 GRFVFGIG 648
GR + GIG
Sbjct: 190 GRMLNGIG 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,450,622
Number of Sequences: 5004
Number of extensions: 73568
Number of successful extensions: 191
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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