Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I19
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0801 - 7750548-7751708                                           32   0.47 
01_01_0761 - 5874953-5876803                                           31   1.4  
03_02_0132 - 5808606-5808696,5808804-5808875,5809133-5809204,580...    30   1.9  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.5  
02_05_0874 - 32377906-32378131,32378269-32378384,32378516-323789...    30   2.5  
01_01_0428 + 3250204-3251724                                           29   5.8  

>08_01_0801 - 7750548-7751708
          Length = 386

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 8   DRHLVEVTVYFLKQNCLCKIENVKRVLAVYRRKSRHQYSRL--CCTEF-TCHHRQEHVFA 178
           DR+ V+  +  L Q  LCK  NV  V        +HQ  +L   C EF +C  + + V A
Sbjct: 287 DRYAVD-RLKLLCQGILCKNLNVHNVATTLALADQHQCDKLKDACIEFMSCSKKMKGVVA 345

Query: 179 TKG 187
           +KG
Sbjct: 346 SKG 348


>01_01_0761 - 5874953-5876803
          Length = 616

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = +3

Query: 252 ISLIGGIQAPDYGNIICKVDVEFSNGEENMTISQVTNGISEIVQQYSGTEVLNGSDVKIQ 431
           IS  G +Q   YG I       FS    N         +++    YSG  V + + V   
Sbjct: 415 ISAAGWVQTSSYGKITATWTQRFSFVNTNQVREDTEQTVNQTTDAYSGVHVTDHAGVAYS 474

Query: 432 FRARKDDMLHLY 467
             A +   L++Y
Sbjct: 475 QEAEQSFPLYIY 486


>03_02_0132 -
           5808606-5808696,5808804-5808875,5809133-5809204,
           5809299-5809379,5809475-5809618,5809708-5809779,
           5810027-5810140,5810684-5810755,5811462-5811609,
           5812120-5812231
          Length = 325

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 453 MLHLYSSFSSFIGEIPLNL-NINNAKYM 533
           + HLY SF++F GEIP+ L N+   +Y+
Sbjct: 170 LTHLYLSFNNFKGEIPVELANLPELRYL 197


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +3

Query: 264  GGIQAPDYG-NIICKVDVEFSNGEENMTISQVTNG--ISEIVQQYSGTEVLNGSDVKIQF 434
            G   +  YG +I+   DV  S  +++ +   +TNG   S  V++     +LN   + I  
Sbjct: 908  GPCPSSSYGQSILNSHDVSLSLPQKDSSCIAITNGPSSSNYVEEVPMETILNQPTLSIPL 967

Query: 435  RARKDDMLH 461
             A KD++LH
Sbjct: 968  EACKDELLH 976


>02_05_0874 -
           32377906-32378131,32378269-32378384,32378516-32378921,
           32379023-32379139,32379229-32379291,32380183-32380373
          Length = 372

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/35 (31%), Positives = 24/35 (68%)
 Frame = -1

Query: 269 SSYQRNCHHFWVILYQSLYSKAVSSTESLW*QKHV 165
           +S +R   HF +++Y++L++ AV +  +LW ++ V
Sbjct: 32  ASLKRGMSHFVLVVYRNLFATAVMAPFALWFERRV 66


>01_01_0428 + 3250204-3251724
          Length = 506

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 441 RKDDMLHLYSSFSSFIGEIPLNL 509
           R  DM+HL  S S+F G+IP+ L
Sbjct: 127 RLTDMIHLNFSHSNFYGQIPIGL 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,490,095
Number of Sequences: 37544
Number of extensions: 393350
Number of successful extensions: 827
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)