Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I13
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    24   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.9  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.9  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 590 MVSTFSL*KKSENSDFNRFKSWFSSQAGPLNN 495
           +VST  L KK  +  FN F++   +Q    NN
Sbjct: 85  LVSTEMLLKKDSSEAFNEFRTKILAQVHGTNN 116


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 391  KFYPKQCCGGASCCVNQH 338
            ++YP + C     CVN H
Sbjct: 1211 QYYPHESCSSFYVCVNGH 1228


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 343 QHQTELPLFCNITSQSNYCLQMGQNRFC 260
           +HQ +  +FCN +S SN C    +N +C
Sbjct: 481 RHQIDAKMFCNESSVSN-C----ENEYC 503


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 64  KMPVLQRIKKPTTRKGKKVLLSKEPK 141
           + P  +R+KKP  ++G      K P+
Sbjct: 207 RSPRTRRVKKPGAKQGAPTAEEKRPR 232


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 394 QKFYPKQCCGGASCCVNQHQT 332
           Q F P  CCG   C V   +T
Sbjct: 55  QCFGPSICCGPFGCLVGTPET 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,510
Number of Sequences: 336
Number of extensions: 4232
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)