Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I09
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    27   0.058
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    27   0.058
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   0.95 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 0.058
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -3

Query: 301 FNIYLSP*VLKNKDSTFEINSL*FNLNYSGFSASVFKNFLYSSSVMRSFISLCL 140
           FNI  S   L    ST ++ +     N++  S+SVF N++ ++S++   I +CL
Sbjct: 29  FNISTSN-YLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCL 81


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 27.5 bits (58), Expect = 0.058
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -3

Query: 301 FNIYLSP*VLKNKDSTFEINSL*FNLNYSGFSASVFKNFLYSSSVMRSFISLCL 140
           FNI  S   L    ST ++ +     N++  S+SVF N++ ++S++   I +CL
Sbjct: 29  FNISTSN-YLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCL 81


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +3

Query: 12  LLVKSILHYLGTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDL 164
           L +  I++Y   +  + K++  K   I TSC   G L+R+       +ND+
Sbjct: 174 LQITLIVNYALALKNRFKEL-QKYLKIETSCRYVGTLYRILTTMMEMVNDI 223


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -2

Query: 215  WFLSICFQKFLVLFF----SHEIIYLALLNYFQSKQPSFVITRCIY 90
            W  S+  +K +V F     + +I    ++NY + K    V+ R +Y
Sbjct: 1173 WICSLIHRKKIVKFLDGIMAFDIQLKQVVNYKKKKFQRMVVARYVY 1218


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 179 LFFSHEIIYLALLNYFQSKQPSFVITRCIY*CWFVXYIF 63
           +FF+  +++L  L+YF       +   CIY  +    IF
Sbjct: 187 IFFNMHLLFLLCLDYFTL---HLLFLPCIYYFYSAFIIF 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,041
Number of Sequences: 336
Number of extensions: 1175
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)