Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I09
         (435 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   4.7  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   4.7  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    22   8.2  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 15  LVKSILHYLGTVTEKNKDVXDKPALINTSC 104
           L K+ILHY G V      +   PA+  +SC
Sbjct: 137 LTKAILHYTGKV------IWTPPAIFKSSC 160


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 18  VKSILHYLGTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSE 152
           VK    Y+G  T+         AL  ++CY   +LF L + +Q +
Sbjct: 18  VKKSFPYVGPFTQLPVTPPGAAALPYSACYVGNYLFSLGLQQQQQ 62


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +2

Query: 2   GRPIASEIYSPLSRYCYGEK*RCXRQTSTNKYIL 103
           GRP     Y  L+R  Y  +  C     T  Y+L
Sbjct: 13  GRPTGVNQYPWLARLVYDGQFHCGASLLTKDYVL 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,413
Number of Sequences: 2352
Number of extensions: 4088
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)