Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_I09
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M69175-1|AAA36011.1| 173|Homo sapiens H-protein protein. 62 6e-10
D00723-1|BAA00625.1| 173|Homo sapiens protein ( Homo sapiens mR... 62 6e-10
BT009827-1|AAP88829.1| 173|Homo sapiens glycine cleavage system... 62 6e-10
BC020922-1|AAH20922.1| 173|Homo sapiens glycine cleavage system... 62 6e-10
BC000790-1|AAH00790.1| 173|Homo sapiens glycine cleavage system... 62 6e-10
AY533031-1|AAS59848.1| 125|Homo sapiens mitochondrial glycine c... 62 6e-10
AY310735-1|AAP50260.1| 173|Homo sapiens glycine cleavage system... 62 6e-10
CR457072-1|CAG33353.1| 173|Homo sapiens GCSH protein. 62 8e-10
AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette su... 29 5.2
AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette su... 29 5.2
AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A1... 29 5.2
>M69175-1|AAA36011.1| 173|Homo sapiens H-protein protein.
Length = 173
Score = 62.5 bits (145), Expect = 6e-10
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+ E
Sbjct: 118 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE 173
>D00723-1|BAA00625.1| 173|Homo sapiens protein ( Homo sapiens mRNA
for hydrogen carrier protein, a component of an enzyme
complex, glycine synthase (EC 2.1.2.10). ).
Length = 173
Score = 62.5 bits (145), Expect = 6e-10
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+ E
Sbjct: 118 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE 173
>BT009827-1|AAP88829.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 62.5 bits (145), Expect = 6e-10
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+ E
Sbjct: 118 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE 173
>BC020922-1|AAH20922.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 62.5 bits (145), Expect = 6e-10
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+ E
Sbjct: 118 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE 173
>BC000790-1|AAH00790.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 62.5 bits (145), Expect = 6e-10
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+ E
Sbjct: 118 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE 173
>AY533031-1|AAS59848.1| 125|Homo sapiens mitochondrial glycine
cleavage system H-protein precursor protein.
Length = 125
Score = 62.5 bits (145), Expect = 6e-10
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+ E
Sbjct: 70 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE 125
>AY310735-1|AAP50260.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 62.5 bits (145), Expect = 6e-10
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+ E
Sbjct: 118 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKSIEE 173
>CR457072-1|CAG33353.1| 173|Homo sapiens GCSH protein.
Length = 173
Score = 62.1 bits (144), Expect = 8e-10
Identities = 23/53 (43%), Positives = 39/53 (73%)
Frame = +3
Query: 42 GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKT 200
G VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K++K+
Sbjct: 118 GEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIKS 170
>AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 188 FLVLFFSHEIIYLALLNYFQSKQPSFVITRCIY*C----WFVXYIFIFL 54
FL+LF H I Y L + S + FV+ CI C F+ Y+ F+
Sbjct: 989 FLILFSIHLIYYFIFLGFQLSWELMFVLVVCIIGCAVSLIFLTYVLSFI 1037
>AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 188 FLVLFFSHEIIYLALLNYFQSKQPSFVITRCIY*C----WFVXYIFIFL 54
FL+LF H I Y L + S + FV+ CI C F+ Y+ F+
Sbjct: 989 FLILFSIHLIYYFIFLGFQLSWELMFVLVVCIIGCAVSLIFLTYVLSFI 1037
>AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A10
protein.
Length = 1543
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 188 FLVLFFSHEIIYLALLNYFQSKQPSFVITRCIY*C----WFVXYIFIFL 54
FL+LF H I Y L + S + FV+ CI C F+ Y+ F+
Sbjct: 989 FLILFSIHLIYYFIFLGFQLSWELMFVLVVCIIGCAVSLIFLTYVLSFI 1037
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,072,434
Number of Sequences: 237096
Number of extensions: 588570
Number of successful extensions: 937
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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