Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I09
         (435 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical pr...    62   2e-10
Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical pr...    58   2e-09
Z92972-4|CAB07489.2|  337|Caenorhabditis elegans Hypothetical pr...    32   0.21 
U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical
           protein D1025.2 protein.
          Length = 148

 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = +3

Query: 42  GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAE 209
           G + EKN  + D+P +IN S  +KGWL+RL+I    ++N+L+TEE+Y KF K++ E
Sbjct: 91  GKILEKNTKLEDEPGIINKSPLEKGWLYRLEITSNEQLNELLTEEQYNKF-KSEEE 145


>Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical
           protein F52A8.5 protein.
          Length = 146

 Score = 58.4 bits (135), Expect = 2e-09
 Identities = 24/54 (44%), Positives = 37/54 (68%)
 Frame = +3

Query: 42  GTVTEKNKDVXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTD 203
           GTVT+KN  + ++  LIN S ++KGWL++LK+    E+  L+ EE+Y KF K +
Sbjct: 89  GTVTQKNVKLEEEAGLINKSPFEKGWLYKLKVKSADELEKLLNEEQYAKFKKDE 142


>Z92972-4|CAB07489.2|  337|Caenorhabditis elegans Hypothetical
           protein T19C9.4 protein.
          Length = 337

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
 Frame = -2

Query: 239 PLIQLKLFW-FLSICFQKFLVLFFSHEIIYLALLNYFQSKQPSFVITRCIY*CWFVX--- 72
           PL    LF   L +CF  F  LFF   ++  A +  F     SFV    +          
Sbjct: 65  PLFLNHLFGGLLDVCFCSFSTLFFFEPMMAFATVGVFNWLGLSFVYQGVLGAAMASGVAG 124

Query: 71  -YIFIFLRNSTEIMENRF 21
            Y+F+F   S+ ++ENRF
Sbjct: 125 SYVFLFESRSSSLLENRF 142


>U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical
           protein C35D10.7b protein.
          Length = 486

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +3

Query: 69  VXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAEKPE*FKLN*RLFI 248
           V D P+++  +   K W    +I+KQ     L   EE +K L+ D   P+  K+  + F+
Sbjct: 378 VKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEELQKMLEKDYFLPK-GKIFCQ-FL 435

Query: 249 SNVESLF 269
            NV  LF
Sbjct: 436 LNVAQLF 442


>U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical
           protein C35D10.7a protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +3

Query: 69  VXDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAEKPE*FKLN*RLFI 248
           V D P+++  +   K W    +I+KQ     L   EE +K L+ D   P+  K+  + F+
Sbjct: 429 VKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEELQKMLEKDYFLPK-GKIFCQ-FL 486

Query: 249 SNVESLF 269
            NV  LF
Sbjct: 487 LNVAQLF 493


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,137,297
Number of Sequences: 27780
Number of extensions: 105531
Number of successful extensions: 342
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)