Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_I06
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein. 33 0.58
BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone recepto... 33 0.58
AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone recepto... 33 0.58
AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone recepto... 33 0.58
Z98257-2|CAI20259.1| 280|Homo sapiens UBX domain containing 3 p... 30 5.4
BC047428-1|AAH47428.1| 280|Homo sapiens UBX domain containing 3... 30 5.4
AK058158-1|BAB71693.1| 280|Homo sapiens protein ( Homo sapiens ... 30 5.4
AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein. 29 9.5
AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein. 29 9.5
AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring prot... 29 9.5
AF026245-1|AAB86384.1| 1642|Homo sapiens yotiao protein. 29 9.5
AC000066-1|AAC60380.1| 1620|Homo sapiens yotiao protein. 29 9.5
AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and Golgi-l... 29 9.5
>BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein.
Length = 955
Score = 33.5 bits (73), Expect = 0.58
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 152 KLHGLQATSITLNDRFTLLSTAGTDRAAMRMKKRPTVHQ 268
K H ++ +TL++RFT GT++ A + KK P +H+
Sbjct: 639 KEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHR 677
>BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 33.5 bits (73), Expect = 0.58
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 152 KLHGLQATSITLNDRFTLLSTAGTDRAAMRMKKRPTVHQ 268
K H ++ +TL++RFT GT++ A + KK P +H+
Sbjct: 639 KEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHR 677
>AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 33.5 bits (73), Expect = 0.58
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 152 KLHGLQATSITLNDRFTLLSTAGTDRAAMRMKKRPTVHQ 268
K H ++ +TL++RFT GT++ A + KK P +H+
Sbjct: 639 KEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHR 677
>AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP150
protein.
Length = 955
Score = 33.5 bits (73), Expect = 0.58
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 152 KLHGLQATSITLNDRFTLLSTAGTDRAAMRMKKRPTVHQ 268
K H ++ +TL++RFT GT++ A + KK P +H+
Sbjct: 639 KEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHR 677
>Z98257-2|CAI20259.1| 280|Homo sapiens UBX domain containing 3
protein.
Length = 280
Score = 30.3 bits (65), Expect = 5.4
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 238 AHEKTSYRTSIPYTNPEHKKPFLD*PDRSKAGVSDEAGDITSTAWTGSST 387
AH S +IPY P +KP P G SDE ++ TG+S+
Sbjct: 60 AHHIPSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASS 109
>BC047428-1|AAH47428.1| 280|Homo sapiens UBX domain containing 3
protein.
Length = 280
Score = 30.3 bits (65), Expect = 5.4
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 238 AHEKTSYRTSIPYTNPEHKKPFLD*PDRSKAGVSDEAGDITSTAWTGSST 387
AH S +IPY P +KP P G SDE ++ TG+S+
Sbjct: 60 AHHIPSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASS 109
>AK058158-1|BAB71693.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ25429 fis, clone TST05630. ).
Length = 280
Score = 30.3 bits (65), Expect = 5.4
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 238 AHEKTSYRTSIPYTNPEHKKPFLD*PDRSKAGVSDEAGDITSTAWTGSST 387
AH S +IPY P +KP P G SDE ++ TG+S+
Sbjct: 60 AHHIPSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASS 109
>AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein.
Length = 3908
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 352 RPLHLILQLSSDLVNQETVSYVQGLCKVLMYGRTFFHAHSSAISSGSREQSKSIVQGN 179
+PLHL++ V++E ++Q LC VL G + A +++ +E S + N
Sbjct: 1182 KPLHLLIGKLQKAVSEECSYFLQTLCSVL--GEYYTPALKCEVNAEDKENSGDYISEN 1237
>AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein.
Length = 3911
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 352 RPLHLILQLSSDLVNQETVSYVQGLCKVLMYGRTFFHAHSSAISSGSREQSKSIVQGN 179
+PLHL++ V++E ++Q LC VL G + A +++ +E S + N
Sbjct: 1194 KPLHLLIGKLQKAVSEECSYFLQTLCSVL--GEYYTPALKCEVNAEDKENSGDYISEN 1249
>AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring protein
AKAP350 protein.
Length = 3595
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 352 RPLHLILQLSSDLVNQETVSYVQGLCKVLMYGRTFFHAHSSAISSGSREQSKSIVQGN 179
+PLHL++ V++E ++Q LC VL G + A +++ +E S + N
Sbjct: 872 KPLHLLIGKLQKAVSEECSYFLQTLCSVL--GEYYTPALKCEVNAEDKENSGDYISEN 927
>AF026245-1|AAB86384.1| 1642|Homo sapiens yotiao protein.
Length = 1642
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 352 RPLHLILQLSSDLVNQETVSYVQGLCKVLMYGRTFFHAHSSAISSGSREQSKSIVQGN 179
+PLHL++ V++E ++Q LC VL G + A +++ +E S + N
Sbjct: 1194 KPLHLLIGKLQKAVSEECSYFLQTLCSVL--GEYYTPALKCEVNAEDKENSGDYISEN 1249
>AC000066-1|AAC60380.1| 1620|Homo sapiens yotiao protein.
Length = 1620
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 352 RPLHLILQLSSDLVNQETVSYVQGLCKVLMYGRTFFHAHSSAISSGSREQSKSIVQGN 179
+PLHL++ V++E ++Q LC VL G + A +++ +E S + N
Sbjct: 1163 KPLHLLIGKLQKAVSEECSYFLQTLCSVL--GEYYTPALKCEVNAEDKENSGDYISEN 1218
>AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and
Golgi-localized PKN-associated protein (CG-NAP) protein.
Length = 3899
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 352 RPLHLILQLSSDLVNQETVSYVQGLCKVLMYGRTFFHAHSSAISSGSREQSKSIVQGN 179
+PLHL++ V++E ++Q LC VL G + A +++ +E S + N
Sbjct: 1182 KPLHLLIGKLQKAVSEECSYFLQTLCSVL--GEYYTPALKCEVNAEDKENSGDYISEN 1237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,270,446
Number of Sequences: 237096
Number of extensions: 1522410
Number of successful extensions: 2813
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2813
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -