Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I05
         (936 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0302 + 15546969-15547511,15549514-15549750,15550046-155501...    30   2.3  
07_03_0354 - 17109041-17109289,17109423-17109555,17110560-171107...    29   4.0  
11_04_0218 + 14983132-14984658,14984762-14984869,14984964-149851...    29   7.0  
01_06_0739 - 31601656-31602233,31602777-31602906                       29   7.0  
02_05_1016 - 33514317-33514505,33514855-33515386,33516499-33516608     28   9.3  

>08_02_0302 +
           15546969-15547511,15549514-15549750,15550046-15550188,
           15550616-15550706,15550791-15550931
          Length = 384

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +2

Query: 650 EEGQRQKLTIVLR-AVNRVLYGTSKPVPKWSVDSIHSKSIVSILHLLVALARHFPSSHTS 826
           E+G+R++++     ++    YG   P+    +   HS  +   LH L+ L+R +P+S   
Sbjct: 17  EDGRRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDAD 76

Query: 827 PRK 835
            R+
Sbjct: 77  IRR 79


>07_03_0354 -
           17109041-17109289,17109423-17109555,17110560-17110738,
           17111568-17111689,17111813-17111960
          Length = 276

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 761 SIVSILHLLVALARHFPSSHTSPRKCFCERCYRQXKHT-DPTISP 892
           SI+S   LL+  A    SS ++PR   CERC R  K    P++SP
Sbjct: 6   SILSSSFLLLLAA----SSSSTPRASACERCVRNGKAAYSPSLSP 46


>11_04_0218 +
           14983132-14984658,14984762-14984869,14984964-14985125,
           14985270-14985275
          Length = 600

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 18/79 (22%), Positives = 35/79 (44%)
 Frame = +2

Query: 335 EVQDVQAEGKYAIDSPGSPTAPEIPPEEYTLNENEERAIIEPRSLEDPRVRDLIQVLIDW 514
           +  + +     A+D+P  P A EIP       E ++      + L D + + ++  + DW
Sbjct: 277 DAAEAECRRALAVDNPDDPAAHEIPLGSAIGEEYDDMVSSLRKQLCDLQKKLVLLAVHDW 336

Query: 515 INDELASQRIIVQDIIEDL 571
            + E   Q  I+   I++L
Sbjct: 337 ASMESEKQSQILSVSIDEL 355


>01_06_0739 - 31601656-31602233,31602777-31602906
          Length = 235

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 374 DSPGSPTAPEIPPEEYTLNENEERAIIEPRSLEDPRVRDLIQVL 505
           D+ G PT  ++  +E TL  N + AI E       ++RD +++L
Sbjct: 64  DADGYPTTEDLSIDEETLQRNLQTAIQEEDYSRAAKIRDDLRIL 107


>02_05_1016 - 33514317-33514505,33514855-33515386,33516499-33516608
          Length = 276

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 374 DSPGSPTAPEIPPEEYTLNENEERAIIEPRSLEDPRVRDLIQVL 505
           ++ GSP+   I  +E TL  + + AI E    +  ++RD ++VL
Sbjct: 59  EAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRDELRVL 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,894,847
Number of Sequences: 37544
Number of extensions: 422686
Number of successful extensions: 1051
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)