Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_I03
(922 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p ... 89 2e-16
UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep: Zgc:5... 74 4e-12
UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4; n... 74 6e-12
UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome a... 72 2e-11
UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12... 69 1e-10
UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole gen... 61 4e-08
UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma j... 58 4e-07
UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep: F17... 56 1e-06
UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RA... 56 1e-06
UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11; Liliopsida|... 51 4e-05
UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2; ... 51 4e-05
UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, wh... 51 4e-05
UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;... 50 8e-05
UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein RA... 49 1e-04
UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_Q553P6 Cluster: Putative uncharacterized protein; n=1; ... 35 3.4
UniRef50_Q24BB5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q6CLT0 Cluster: Similar to sgd|S0006031 Saccharomyces c... 33 7.8
>UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p -
Drosophila melanogaster (Fruit fly)
Length = 64
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 292
K +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QSIR A
Sbjct: 16 KYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64
>UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep:
Zgc:56419 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 66
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/49 (69%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 146 KNITMRGNVPKTTK-EKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 289
KNIT+RGNV K+T+ +E++ V PWLLALF+FVVCGSA+FQIIQSIR+
Sbjct: 16 KNITLRGNVAKSTRGTQEEKAVVGPWLLALFVFVVCGSAIFQIIQSIRM 64
>UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4;
n=33; Eumetazoa|Rep: Ribosome-attached membrane protein
4 - Homo sapiens (Human)
Length = 66
Score = 73.7 bits (173), Expect = 6e-12
Identities = 35/49 (71%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 289
KNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQSIR+
Sbjct: 16 KNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 64
>UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome
attached membrane protein 4; n=1; Pan troglodytes|Rep:
PREDICTED: similar to ribosome attached membrane protein
4 - Pan troglodytes
Length = 231
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +2
Query: 98 KWPLSRECVSPTRSPVKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQ 277
+W SR V PTRS + P+ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 166 RWSPSRGSVWPTRSTARTSPSAATSPRPRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 225
Query: 278 SIRL 289
SIR+
Sbjct: 226 SIRM 229
>UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12.5;
n=2; Bilateria|Rep: Putative uncharacterized protein
T09A12.5 - Caenorhabditis elegans
Length = 63
Score = 69.3 bits (162), Expect = 1e-10
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 289
KN+T RGNVPK K E ++P + WL+ LFIFVVCGSA+F++I+ I++
Sbjct: 16 KNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63
>UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 280
KNIT RG+VP+TT +K YPV P LL F+FVV GS++FQII++
Sbjct: 54 KNITKRGSVPETTTKKGSDYPVGPVLLGFFVFVVIGSSLFQIIRT 98
>UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02042 protein - Schistosoma
japonicum (Blood fluke)
Length = 79
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 149 NITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 292
N+ RGNVPK+ K + Q + +L L +FVVCGSAVF+IIQ IR+A
Sbjct: 31 NVVNRGNVPKSLKSSDSQSNMNACILGLIVFVVCGSAVFEIIQHIRMA 78
>UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep:
F17L21.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 77
Score = 56.4 bits (130), Expect = 1e-06
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 280
KNI RG VP+TT +K YPV P LL F+FVV GS++FQII++
Sbjct: 26 KNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRT 70
>UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RAMP4
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Ribosome associated membrane protein RAMP4
containing protein - Tetrahymena thermophila SB210
Length = 107
Score = 56.4 bits (130), Expect = 1e-06
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSI 283
KN+T RG VP + K KE++ V PW+L +F+FVV GSA+FQI+ +
Sbjct: 60 KNVTNRGKVPSSLKSKEEK-SVGPWVLGIFLFVVVGSAIFQILNVV 104
>UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11;
Liliopsida|Rep: Os11g0637400 protein - Oryza sativa
subsp. japonica (Rice)
Length = 573
Score = 51.2 bits (117), Expect = 4e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGS 256
KNIT RG+VP+TT +K + YPV P +L FIFVV GS
Sbjct: 27 KNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 63
>UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 460
Score = 51.2 bits (117), Expect = 4e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGS 256
KNIT RG+VP+TT +K + YPV P +L FIFVV GS
Sbjct: 17 KNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 53
>UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 75
Score = 51.2 bits (117), Expect = 4e-05
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +2
Query: 149 NITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQII 274
N+ +G VPK+ +KE+ PV P LL +F+FVV GSA+FQI+
Sbjct: 25 NVNKQGKVPKSLIKKEENLPVGPILLGVFLFVVVGSALFQIL 66
>UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;
n=3; Plasmodium|Rep: Arabidopsis thaliana
F17L21.12-related - Plasmodium yoelii yoelii
Length = 67
Score = 50.0 bits (114), Expect = 8e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 149 NITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQII 274
NIT RGNVP + +K +Y V P LL +FIF+V GS V QI+
Sbjct: 17 NITNRGNVPTSIAKKGKKYTVGPILLGIFIFIVIGSVVIQIL 58
>UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein
RAMP4, putative; n=3; Plasmodium|Rep: Ribosome
associated membrane protein RAMP4, putative - Plasmodium
vivax
Length = 102
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 149 NITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIR 286
NIT RGNVP + +K ++PV P LL +F+FVV GS Q++ I+
Sbjct: 51 NITHRGNVPASLVKKGKKHPVGPILLVIFVFVVIGSVFIQMLSMIQ 96
>UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 65
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 280
KNI RG+V ++ +K+ YPV P+ L LFIFVV GSA+ Q+I S
Sbjct: 16 KNIDKRGSV--SSSKKKSGYPVGPFALGLFIFVVIGSAIIQMIVS 58
>UniRef50_Q553P6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 59
Score = 34.7 bits (76), Expect = 3.4
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQ 277
+NI RG + K+KED + P++L IFVV GS + QI++
Sbjct: 16 ENIEKRGVA--SPKKKEDGLNINPYVLGFIIFVVVGSTLLQILK 57
>UniRef50_Q24BB5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 772
Score = 33.5 bits (73), Expect = 7.8
Identities = 23/88 (26%), Positives = 44/88 (50%)
Frame = -3
Query: 659 ENRKNIQIKKNDYFIHYILMEFVA*VVFKNYIEKETKIHRKFYNRYLNVPNNLMYRRPVL 480
EN K Q+ + + I F + + ++ +K ++ KFY L + + +L
Sbjct: 602 ENSKENQVNNSKDGLQAIQKNFQSDIHDESNQQKNDELPDKFYFEKLKRESYYKCFKYIL 661
Query: 479 TL*V*KRQQATIAQLKVLMAASENTLSC 396
+ K+QQ+ I ++K+++ ASEN L C
Sbjct: 662 KI---KKQQSPIGKMKMIVKASENILVC 686
>UniRef50_Q6CLT0 Cluster: Similar to sgd|S0006031 Saccharomyces
cerevisiae YPL110c; n=2; Ascomycota|Rep: Similar to
sgd|S0006031 Saccharomyces cerevisiae YPL110c -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 1374
Score = 33.5 bits (73), Expect = 7.8
Identities = 23/60 (38%), Positives = 27/60 (45%)
Frame = -2
Query: 300 VI*ASLIDWIIWNTAEPHTTKMKRARSQGATGYWSSFSLVVLGTFPLIVMFLTGDLVGDT 121
+I SLI+W WN P S+G T L V+GT PL V LT L DT
Sbjct: 478 IIIESLIEWGAWNADIPIDDVHVWGDSEGLT----PIHLAVIGTHPLTVRILTSHLGPDT 533
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 848,300,343
Number of Sequences: 1657284
Number of extensions: 16772117
Number of successful extensions: 38785
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 37356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38774
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -