Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I03
         (922 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p pro...    89   1e-17
AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB...    89   1e-17
AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA...    89   1e-17
AY075181-1|AAL68051.1|  497|Drosophila melanogaster AT12868p pro...    29   9.0  
AE014134-2677|AAN10932.1|  497|Drosophila melanogaster CG31819-P...    29   9.0  

>AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p
           protein.
          Length = 64

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = +2

Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 292
           K +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QSIR A
Sbjct: 16  KYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64


>AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB,
           isoform B protein.
          Length = 64

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = +2

Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 292
           K +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QSIR A
Sbjct: 16  KYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64


>AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA,
           isoform A protein.
          Length = 64

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = +2

Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 292
           K +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QSIR A
Sbjct: 16  KYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64


>AY075181-1|AAL68051.1|  497|Drosophila melanogaster AT12868p
           protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 23/97 (23%), Positives = 44/97 (45%)
 Frame = +2

Query: 125 SPTRSPVKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA*ITK 304
           +P  SP  N +   ++P+T  E+ +Q  V  W L      +  S    + +S RL     
Sbjct: 52  TPLESPSNNYSSDRSLPQTKLEEGEQ-DVDYWELKKVFQKLDLSDQIVLYRSFRLLPAAC 110

Query: 305 TTGELLSKTQQNNNTIHLKLRHDLHQHLFIDMRECFR 415
            T    ++ + +  T+H  L  +  +HL + M++ F+
Sbjct: 111 YTLWRSTRKRLDFRTLHKDLGEESQRHLIVHMKDHFK 147


>AE014134-2677|AAN10932.1|  497|Drosophila melanogaster CG31819-PA
           protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 23/97 (23%), Positives = 44/97 (45%)
 Frame = +2

Query: 125 SPTRSPVKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA*ITK 304
           +P  SP  N +   ++P+T  E+ +Q  V  W L      +  S    + +S RL     
Sbjct: 52  TPLESPSNNYSSDRSLPQTKLEEGEQ-DVDYWELKKVFQKLDLSDQIVLYRSFRLLPAAC 110

Query: 305 TTGELLSKTQQNNNTIHLKLRHDLHQHLFIDMRECFR 415
            T    ++ + +  T+H  L  +  +HL + M++ F+
Sbjct: 111 YTLWRSTRKRLDFRTLHKDLGEESQRHLIVHMKDHFK 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,870,573
Number of Sequences: 53049
Number of extensions: 766786
Number of successful extensions: 1562
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)