Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I03
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    73   4e-13
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    69   4e-12
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   4.7  
U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = +2

Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 289
           KN+  RGNV K+ K  ED+YP APWL+ LF+FVVCGSAVF+II+ +++
Sbjct: 16  KNVNNRGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRYVKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = +2

Query: 146 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 289
           KN+T RGNVPK  K  E ++P + WL+ LFIFVVCGSA+F++I+ I++
Sbjct: 16  KNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 256 CCVPD--NPINKTSLNHEDNWRTA 321
           CC P+  N +N  S+ H  NWRTA
Sbjct: 136 CCFPEVVNYLNTHSVGHVKNWRTA 159


>U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical
           protein K09C4.10 protein.
          Length = 1035

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -1

Query: 265 EHSRATHYEDEESKEPGCHRILVFFFLSSFGYIPPHCDVFNWRSRWRYAFSA*GPFCFVI 86
           +++  THY  E+   P   ++     L+   YI     +FN   R R  F+  G  CF+ 
Sbjct: 46  KNTYVTHYMLEKLPRPSILKLADDMLLARMSYISK---IFNEYKRSRGKFNFLGALCFIN 102

Query: 85  KYI 77
           +Y+
Sbjct: 103 EYL 105


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/57 (22%), Positives = 26/57 (45%)
 Frame = +1

Query: 169 CTQNY*GKRRPISCGTLAPCSLHLRSVWLCCVPDNPINKTSLNHEDNWRTAIENTTK 339
           C+  +   ++P  C T   C L  + + +C VP + I +     ++ W+   E  T+
Sbjct: 113 CSHCHNDAKKPRFCVT---CGLQKKYLMMCRVPKDGIERDDAEEQEEWKRRQEEETR 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,010,452
Number of Sequences: 27780
Number of extensions: 423656
Number of successful extensions: 965
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)