Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_I03
         (922 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.73 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         24   2.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   9.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   9.0  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 665 IMYATVNSI-DDQGNPVHNPKMSMFPYILV*CKIINI*EHLINVKKNSFP*SIVXFEKK 838
           I  A V S+ +D GNP+   K S    IL   ++ N+ + ++ V+ +     ++ F +K
Sbjct: 356 IASAKVRSMFNDSGNPILKAKPSEVVQILGWKELPNVGDEILEVENDKILQEVIKFRQK 414


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 157 CDVFNWRSRW 128
           CDV +W+S+W
Sbjct: 64  CDVLSWQSKW 73


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 830 EKKTHNVHIYGPGCI*M 880
           EK  H +HI GPG I M
Sbjct: 519 EKSLHYLHIAGPGKIQM 535


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 830 EKKTHNVHIYGPGCI*M 880
           EK  H +HI GPG I M
Sbjct: 519 EKSLHYLHIAGPGKIQM 535


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +2

Query: 314 ELLSKTQQNNNTIHLKLRHDLHQHLFIDMRE 406
           + L +    N+ +   ++HD+ + L ID+R+
Sbjct: 345 KFLKQKYVKNSKLEKVIKHDILRMLIIDLRK 375


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 5/17 (29%), Positives = 11/17 (64%)
 Frame = -3

Query: 761 FYIIQEYMETLTFWDYE 711
           FY + E ++ +  WD++
Sbjct: 103 FYFVHESLKNVLLWDFQ 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,595
Number of Sequences: 438
Number of extensions: 5913
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)