Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H24
(774 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42285 Cluster: Superkiller viralicidic activity 2-like... 239 5e-62
UniRef50_Q23223 Cluster: Uncharacterized helicase W08D2.7; n=3; ... 231 1e-59
UniRef50_P47047 Cluster: ATP-dependent RNA helicase DOB1; n=29; ... 196 4e-49
UniRef50_UPI0000498B4A Cluster: DEAD/DEAH box helicase; n=2; Ent... 195 9e-49
UniRef50_O14232 Cluster: Uncharacterized helicase C6F12.16c; n=6... 193 4e-48
UniRef50_A5E6C5 Cluster: ATP-dependent RNA helicase DOB1; n=1; L... 193 5e-48
UniRef50_O13799 Cluster: Uncharacterized helicase C17H9.02; n=1;... 188 1e-46
UniRef50_A0DE61 Cluster: Chromosome undetermined scaffold_47, wh... 180 4e-44
UniRef50_A7AUA6 Cluster: DSHCT (NUC185) domain containing DEAD/D... 178 1e-43
UniRef50_Q8SS39 Cluster: Putative ATP-DEPENDENT RNA HELICASE; n=... 177 3e-43
UniRef50_Q9ZVW2 Cluster: Expressed protein; n=5; Viridiplantae|R... 176 4e-43
UniRef50_A5K1L9 Cluster: ATP dependent RNA helicase, putative; n... 175 1e-42
UniRef50_A7PFD4 Cluster: Chromosome chr11 scaffold_14, whole gen... 173 3e-42
UniRef50_A2ZC12 Cluster: Putative uncharacterized protein; n=2; ... 173 3e-42
UniRef50_Q016S7 Cluster: ATP-dependent RNA helicase, putative; n... 173 5e-42
UniRef50_Q4UEM0 Cluster: ATP-dependent RNA helicase, putative; n... 170 3e-41
UniRef50_A6REV7 Cluster: Antiviral helicase SKI2; n=1; Ajellomyc... 169 7e-41
UniRef50_Q550D0 Cluster: Putative uncharacterized protein; n=2; ... 163 3e-39
UniRef50_UPI0000E4A659 Cluster: PREDICTED: similar to ankyrin 2,... 159 5e-38
UniRef50_Q1LWQ1 Cluster: Novel protein similar to vertebrate sup... 159 7e-38
UniRef50_A2G2R0 Cluster: DEAD/DEAH box helicase family protein; ... 159 7e-38
UniRef50_Q2U010 Cluster: Cytoplasmic exosomal RNA helicase SKI2;... 158 1e-37
UniRef50_P35207 Cluster: Antiviral helicase SKI2; n=9; Saccharom... 158 1e-37
UniRef50_Q19103 Cluster: Putative uncharacterized protein; n=2; ... 158 2e-37
UniRef50_A0BIQ8 Cluster: Chromosome undetermined scaffold_11, wh... 157 2e-37
UniRef50_Q23RU2 Cluster: DEAD/DEAH box helicase family protein; ... 157 3e-37
UniRef50_A2R7X2 Cluster: Similarity to viral mRNA translation in... 156 5e-37
UniRef50_Q5CVW7 Cluster: Mtr4p like SKI family SFII helicase; n=... 155 9e-37
UniRef50_Q6CWL5 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 155 9e-37
UniRef50_Q6CH67 Cluster: Similarities with sp|P35207 Saccharomyc... 155 1e-36
UniRef50_UPI0001556496 Cluster: PREDICTED: hypothetical protein,... 154 2e-36
UniRef50_Q9VCH8 Cluster: CG10210-PA; n=4; Diptera|Rep: CG10210-P... 154 3e-36
UniRef50_Q15477 Cluster: Helicase SKI2W; n=34; Eumetazoa|Rep: He... 153 4e-36
UniRef50_UPI0000660749 Cluster: superkiller viralicidic activity... 153 6e-36
UniRef50_Q16I20 Cluster: Helicase; n=2; Endopterygota|Rep: Helic... 152 8e-36
UniRef50_O59801 Cluster: RNA helicase involved in mRNA catabolis... 151 1e-35
UniRef50_Q23RU6 Cluster: DEAD/DEAH box helicase family protein; ... 150 4e-35
UniRef50_Q4Q1B9 Cluster: ATP-dependent RNA helicase, putative; n... 149 6e-35
UniRef50_Q6BY98 Cluster: Debaryomyces hansenii chromosome A of s... 149 6e-35
UniRef50_A2FBA2 Cluster: DEAD/DEAH box helicase family protein; ... 149 8e-35
UniRef50_Q4PHM0 Cluster: Putative uncharacterized protein; n=1; ... 149 8e-35
UniRef50_A4RR89 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 147 2e-34
UniRef50_UPI00015B48BB Cluster: PREDICTED: similar to GA10159-PA... 146 4e-34
UniRef50_Q5KBF6 Cluster: Translation repressor, putative; n=2; F... 144 2e-33
UniRef50_A7F1I6 Cluster: Putative uncharacterized protein; n=1; ... 144 2e-33
UniRef50_UPI0000DB702F Cluster: PREDICTED: similar to twister CG... 143 4e-33
UniRef50_A7NYL9 Cluster: Chromosome chr6 scaffold_3, whole genom... 143 4e-33
UniRef50_A7ATD0 Cluster: Helicase with zinc finger motif protein... 141 2e-32
UniRef50_A2DIP0 Cluster: DEAD/DEAH box helicase family protein; ... 141 2e-32
UniRef50_Q7RIW3 Cluster: Antiviral protein ski2; n=6; Plasmodium... 139 6e-32
UniRef50_Q8SS19 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Enceph... 139 6e-32
UniRef50_A2FMN7 Cluster: DEAD/DEAH box helicase family protein; ... 138 1e-31
UniRef50_A5K6G8 Cluster: DEAD/DEAH box helicase, putative; n=2; ... 136 8e-31
UniRef50_Q5CPF4 Cluster: MRNA translation inhibitor SKI2 SFII he... 131 2e-29
UniRef50_Q7QP10 Cluster: GLP_83_12455_16540; n=1; Giardia lambli... 130 4e-29
UniRef50_Q4SQA0 Cluster: Chromosome 4 SCAF14533, whole genome sh... 128 2e-28
UniRef50_Q6AFV9 Cluster: ATP-dependent RNA helicase; n=3; Actino... 125 1e-27
UniRef50_Q3AZ82 Cluster: DEAD/DEAH box helicase-like; n=31; Cyan... 121 2e-26
UniRef50_A0LU68 Cluster: DSH domain protein; n=2; Actinomycetale... 120 4e-26
UniRef50_Q8DLX6 Cluster: Tlr0350 protein; n=2; Bacteria|Rep: Tlr... 119 9e-26
UniRef50_A0JWZ5 Cluster: DEAD/DEAH box helicase domain protein; ... 116 5e-25
UniRef50_A0YS39 Cluster: Antiviral protein; n=1; Lyngbya sp. PCC... 115 2e-24
UniRef50_Q2JRI9 Cluster: ATP-dependent helicase, DEAD/DEAH box f... 114 2e-24
UniRef50_P74686 Cluster: Antiviral protein; n=3; Chroococcales|R... 113 3e-24
UniRef50_O04538 Cluster: F20P5.20 protein; n=2; core eudicotyled... 113 3e-24
UniRef50_Q94EZ6 Cluster: Similar to Synechocystis antiviral prot... 112 8e-24
UniRef50_Q4JVQ3 Cluster: Putative helicase; n=1; Corynebacterium... 112 1e-23
UniRef50_UPI00004988E4 Cluster: DEAD/DEAH box helicase; n=1; Ent... 110 3e-23
UniRef50_Q84561 Cluster: A241R protein; n=5; Chlorovirus|Rep: A2... 110 4e-23
UniRef50_A7BCC7 Cluster: Putative uncharacterized protein; n=1; ... 108 1e-22
UniRef50_Q47P19 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 107 2e-22
UniRef50_Q2J9S5 Cluster: DSH-like; n=3; Bacteria|Rep: DSH-like -... 107 2e-22
UniRef50_Q8NQE6 Cluster: Superfamily II DNA and RNA helicases; n... 106 5e-22
UniRef50_Q8G6A5 Cluster: Probable helicase; n=4; Bifidobacterium... 106 5e-22
UniRef50_Q9SEA2 Cluster: Putative helicase-like protein; n=1; Gu... 106 5e-22
UniRef50_Q6A7Y7 Cluster: Superfamily II RNA helicase; n=1; Propi... 106 7e-22
UniRef50_Q193B9 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 105 9e-22
UniRef50_A4S392 Cluster: Predicted protein; n=1; Ostreococcus lu... 105 1e-21
UniRef50_UPI000050F6D4 Cluster: COG4581: Superfamily II RNA heli... 103 7e-21
UniRef50_Q010R7 Cluster: DNA polymerase theta/eta, DEAD-box supe... 102 1e-20
UniRef50_Q9ZBD8 Cluster: Probable helicase helY; n=24; Actinomyc... 101 2e-20
UniRef50_A5D0M7 Cluster: Putative uncharacterized protein; n=1; ... 100 5e-20
UniRef50_A7K9K6 Cluster: Putative uncharacterized protein Z596R;... 98 2e-19
UniRef50_A1I9V7 Cluster: ATP-dependent DNA helicase; n=1; Candid... 84 4e-15
UniRef50_Q2LR62 Cluster: ATP-dependent DNA helicase; n=1; Syntro... 83 7e-15
UniRef50_A2E3A0 Cluster: Helicase conserved C-terminal domain co... 75 2e-12
UniRef50_A7CQP4 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_A0LNP0 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q7UNW6 Cluster: Putative helicase; n=1; Pirellula sp.|R... 66 9e-10
UniRef50_A7HG06 Cluster: DEAD/DEAH box helicase domain protein; ... 66 9e-10
UniRef50_Q6A5X1 Cluster: DeaD/DeaH box helicase; n=37; Actinobac... 62 1e-08
UniRef50_A7BDZ5 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A4E809 Cluster: Putative uncharacterized protein; n=2; ... 60 8e-08
UniRef50_A6GDC0 Cluster: DEAD/DEAH box helicase; n=1; Plesiocyst... 58 2e-07
UniRef50_Q9VF56 Cluster: CG5205-PA; n=5; Endopterygota|Rep: CG52... 58 2e-07
UniRef50_A1RXH5 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_Q2UQR0 Cluster: Predicted helicase; n=1; Aspergillus or... 55 2e-06
UniRef50_A3DL12 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_UPI00015BB23F Cluster: DEAD/DEAH box helicase domain pr... 54 4e-06
UniRef50_Q9P7T8 Cluster: DEAD/DEAH box helicase; n=2; Eukaryota|... 54 4e-06
UniRef50_Q2NF44 Cluster: Predicted helicase; n=1; Methanosphaera... 54 4e-06
UniRef50_Q7RQI9 Cluster: DEAD/DEAH box helicase, putative; n=6; ... 54 5e-06
UniRef50_Q5UYF9 Cluster: Pre-mRNA splicing helicase; n=6; Haloba... 53 9e-06
UniRef50_UPI000023EEC7 Cluster: hypothetical protein FG10059.1; ... 52 1e-05
UniRef50_UPI0000D56538 Cluster: PREDICTED: similar to activating... 52 2e-05
UniRef50_Q2LTY3 Cluster: Helicase; n=1; Syntrophus aciditrophicu... 52 2e-05
UniRef50_A7EYJ5 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_A5UNL0 Cluster: Archaea-specific helicase; n=1; Methano... 52 2e-05
UniRef50_UPI0001554C3B Cluster: PREDICTED: similar to FLJ00040 p... 52 2e-05
UniRef50_Q582X2 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 51 4e-05
UniRef50_Q5B1R6 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_A7DR62 Cluster: DEAD/DEAH box helicase domain protein p... 51 4e-05
UniRef50_O75643 Cluster: U5 small nuclear ribonucleoprotein 200 ... 51 4e-05
UniRef50_Q8I3B4 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 50 5e-05
UniRef50_A6SGY3 Cluster: Helicase; n=2; Pezizomycotina|Rep: Heli... 50 5e-05
UniRef50_UPI0000F2D63A Cluster: PREDICTED: hypothetical protein;... 50 6e-05
UniRef50_A7ITW0 Cluster: Putative uncharacterized protein m230R;... 50 6e-05
UniRef50_Q9XWI5 Cluster: Putative uncharacterized protein; n=2; ... 50 6e-05
UniRef50_Q8PUF4 Cluster: ATP-dependent DNA helicase; n=4; Methan... 50 6e-05
UniRef50_A3AMK8 Cluster: Putative uncharacterized protein; n=1; ... 50 9e-05
UniRef50_A5K6A5 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 50 9e-05
UniRef50_UPI000049A24D Cluster: DEAD/DEAH box helicase; n=1; Ent... 49 1e-04
UniRef50_UPI0000ECC425 Cluster: UPI0000ECC425 related cluster; n... 49 1e-04
UniRef50_A3ZVS9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 49 1e-04
UniRef50_Q7RYD5 Cluster: Putative uncharacterized protein NCU044... 49 1e-04
UniRef50_A2DLF9 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_A2R2S0 Cluster: Function: DEAD-box helicases are involv... 48 2e-04
UniRef50_Q97VY9 Cluster: Putative ski2-type helicase; n=6; Sulfo... 48 2e-04
UniRef50_Q2FNA5 Cluster: DEAD/DEAH box helicase-like; n=4; Metha... 48 3e-04
UniRef50_Q5UYM9 Cluster: Putative ski2-type helicase; n=2; Halob... 48 3e-04
UniRef50_Q07NP6 Cluster: DEAD/DEAH box helicase domain protein; ... 48 3e-04
UniRef50_Q0UNS2 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A1D818 Cluster: DEAD/DEAH box helicase, putative; n=3; ... 48 3e-04
UniRef50_Q8TGZ1 Cluster: Archaea-specific Superfamily II helicas... 48 3e-04
UniRef50_UPI000155DED9 Cluster: PREDICTED: hypothetical protein;... 47 5e-04
UniRef50_Q6XGE6 Cluster: Helicase-like protein; n=8; Bacteria|Re... 47 5e-04
UniRef50_Q6L634 Cluster: Mer3; n=2; Coprinopsis cinerea|Rep: Mer... 47 6e-04
UniRef50_O26752 Cluster: ATP-dependent RNA helicase related prot... 47 6e-04
UniRef50_Q97AI2 Cluster: Putative ski2-type helicase; n=2; Therm... 47 6e-04
UniRef50_Q4T4J7 Cluster: Chromosome undetermined SCAF9604, whole... 46 8e-04
UniRef50_Q5CRN9 Cluster: SPAC694.02. SKI family SFII helicase; n... 46 8e-04
UniRef50_A5K419 Cluster: RNA helicase, putative; n=9; Plasmodium... 46 8e-04
UniRef50_A2EB56 Cluster: Type III restriction enzyme, res subuni... 46 8e-04
UniRef50_Q4P954 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_Q2GQ57 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_A0RYB7 Cluster: Superfamily II helicase; n=1; Cenarchae... 46 8e-04
UniRef50_Q58524 Cluster: Putative ski2-type helicase (EC 3.6.1.-... 46 8e-04
UniRef50_UPI0000E46B70 Cluster: PREDICTED: hypothetical protein;... 46 0.001
UniRef50_A2ERS7 Cluster: Type III restriction enzyme, res subuni... 46 0.001
UniRef50_UPI00015386DF Cluster: afuHEL308 HELICASE; n=2; Archaeo... 46 0.001
UniRef50_Q7S600 Cluster: Putative uncharacterized protein NCU097... 46 0.001
UniRef50_A7D7W3 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_Q4UHC2 Cluster: DEAD-box helicase, putative; n=2; Theil... 45 0.002
UniRef50_Q0W5A2 Cluster: Putative ATP-dependent DNA helicase; n=... 45 0.002
UniRef50_A6UT61 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_A2STT3 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_A1DP28 Cluster: DEAD/DEAH box DNA helicase (Mer3), puta... 45 0.002
UniRef50_Q09475 Cluster: Uncharacterized helicase C28H8.3; n=2; ... 45 0.002
UniRef50_Q8TL39 Cluster: Putative ski2-type helicase; n=4; Eurya... 45 0.002
UniRef50_A7AW09 Cluster: Helicase, putative; n=1; Babesia bovis|... 44 0.003
UniRef50_Q6CR67 Cluster: Similar to sp|P51979 Saccharomyces cere... 44 0.003
UniRef50_A4QWU8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q5JF65 Cluster: DEAD/DEAH box RNA helicase; n=4; Thermo... 44 0.003
UniRef50_A0CXW7 Cluster: Chromosome undetermined scaffold_30, wh... 44 0.004
UniRef50_A4RI58 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q3IU46 Cluster: ATP-dependent DNA helicase 1; n=1; Natr... 44 0.004
UniRef50_Q16RG8 Cluster: ATP-dependent DNA helicase mer3; n=2; A... 44 0.006
UniRef50_A7AMF4 Cluster: DEAD/DEAH box helicase domain containin... 43 0.007
UniRef50_A4FXS4 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.007
UniRef50_UPI0000D56C16 Cluster: PREDICTED: similar to CG5205-PA;... 43 0.010
UniRef50_A1HG55 Cluster: Superfamily II helicase-like; n=2; Rals... 43 0.010
UniRef50_Q5BWF5 Cluster: SJCHGC05170 protein; n=1; Schistosoma j... 43 0.010
UniRef50_Q4MZ24 Cluster: DEAD box RNA helicase, putative; n=1; T... 43 0.010
UniRef50_Q1JTA7 Cluster: Dead/deah box helicase, putative; n=1; ... 43 0.010
UniRef50_A2ER07 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.010
UniRef50_A2DKN3 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.010
UniRef50_A2D9Y6 Cluster: Type III restriction enzyme, res subuni... 43 0.010
UniRef50_A2PYH4 Cluster: Helicase-like protein HFM1; n=21; Deute... 43 0.010
UniRef50_Q6KZ87 Cluster: Helicase involved in UV-protection; n=2... 43 0.010
UniRef50_O73946 Cluster: Putative ski2-type helicase; n=3; Pyroc... 43 0.010
UniRef50_A2DQY6 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.013
UniRef50_Q5AHI6 Cluster: Putative uncharacterized protein HFM1; ... 42 0.013
UniRef50_Q8R9U4 Cluster: RecG-like helicase; n=9; Clostridia|Rep... 42 0.017
UniRef50_Q8I592 Cluster: Elongation factor g, putative; n=1; Pla... 42 0.017
UniRef50_Q4UBB2 Cluster: Dead/deah-like helicase, putative; n=1;... 42 0.017
UniRef50_Q5JGV6 Cluster: Putative ski2-type helicase (EC 3.6.1.-... 42 0.017
UniRef50_Q4DJ49 Cluster: ATP-dependent RNA helicase, putative; n... 42 0.023
UniRef50_A2DN52 Cluster: Type III restriction enzyme, res subuni... 42 0.023
UniRef50_Q8SRW4 Cluster: Putative RNA HELICASE OF THE SKI2 SUBFA... 42 0.023
UniRef50_Q2GRG2 Cluster: Putative uncharacterized protein; n=1; ... 42 0.023
UniRef50_O26901 Cluster: Putative ski2-type helicase; n=3; Metha... 42 0.023
UniRef50_Q5FLR8 Cluster: ATP-dependent helicase; n=9; Bacteria|R... 41 0.039
UniRef50_Q0YV15 Cluster: Helicase-like:Type III restriction enzy... 41 0.039
UniRef50_A5VH29 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.039
UniRef50_Q4QE98 Cluster: ATP-dependent RNA helicase, putative; n... 41 0.039
UniRef50_Q9SYP1 Cluster: F9H16.5 protein; n=35; Eukaryota|Rep: F... 40 0.052
UniRef50_Q914M3 Cluster: Putative helicase; n=1; Sulfolobus isla... 40 0.069
UniRef50_A3IZE6 Cluster: DEAD/DEAH box helicase-like protein; n=... 40 0.069
UniRef50_Q4QGA4 Cluster: RNA helicase, putative; n=7; Trypanosom... 40 0.069
UniRef50_A2EUT9 Cluster: Type III restriction enzyme, res subuni... 40 0.069
UniRef50_Q1E6Y7 Cluster: Putative uncharacterized protein; n=1; ... 40 0.069
UniRef50_A7F217 Cluster: Putative uncharacterized protein; n=1; ... 40 0.069
UniRef50_Q8TH00 Cluster: Predicted Superfamily II helicase; n=1;... 40 0.069
UniRef50_A6CAB6 Cluster: DEAD/DEAH box helicase-like protein; n=... 40 0.091
UniRef50_Q6FRL6 Cluster: Similar to sp|P51979 Saccharomyces cere... 40 0.091
UniRef50_Q5KBY3 Cluster: DNA helicase, putative; n=1; Filobasidi... 40 0.091
UniRef50_Q55NJ7 Cluster: Putative uncharacterized protein; n=2; ... 40 0.091
UniRef50_Q6C0Y6 Cluster: Yarrowia lipolytica chromosome F of str... 39 0.12
UniRef50_Q8ZY90 Cluster: ATP-dependent, DNA binding helicase; n=... 39 0.12
UniRef50_UPI0000E4A360 Cluster: PREDICTED: similar to RNA helica... 39 0.16
UniRef50_Q6MCM6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_A0LIY3 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.16
UniRef50_Q8SRJ6 Cluster: HFM1-LIKE ATP-DEPENDENT RNA HELICASE; n... 39 0.16
UniRef50_A3H7W4 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 39 0.16
UniRef50_UPI00015B5D9F Cluster: PREDICTED: similar to Mus308; n=... 38 0.21
UniRef50_Q4ESI0 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.21
UniRef50_Q976P4 Cluster: Putative uncharacterized protein ST0147... 38 0.21
UniRef50_P95949 Cluster: Uncharacterized ATP-dependent helicase ... 38 0.21
UniRef50_Q2IX13 Cluster: DEAD/DEAH box helicase; n=5; Alphaprote... 38 0.28
UniRef50_Q9NA34 Cluster: Putative uncharacterized protein; n=3; ... 38 0.28
UniRef50_Q54G57 Cluster: DEAD/DEAH box helicase; n=1; Dictyostel... 38 0.28
UniRef50_Q74ZT5 Cluster: AGR113Wp; n=2; Saccharomycetaceae|Rep: ... 38 0.28
UniRef50_Q6FKF7 Cluster: Similar to sp|P32639 Saccharomyces cere... 38 0.28
UniRef50_Q9YFQ8 Cluster: Putative ski2-type helicase; n=1; Aerop... 38 0.28
UniRef50_Q8D392 Cluster: Protein grpE; n=2; Wigglesworthia gloss... 38 0.28
UniRef50_A2E6Q7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.37
UniRef50_O67837 Cluster: ATP-dependent DNA helicase recG; n=1; A... 38 0.37
UniRef50_O60072 Cluster: Putative helicase mug81; n=1; Schizosac... 38 0.37
UniRef50_Q2GSE6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.49
UniRef50_Q9UT24 Cluster: Pre-mRNA-splicing factor brr2; n=4; Euk... 37 0.49
UniRef50_UPI0000DB7978 Cluster: PREDICTED: similar to mutagen-se... 37 0.64
UniRef50_Q608B8 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 37 0.64
UniRef50_A5FDX5 Cluster: DEAD/DEAH box helicase domain protein; ... 37 0.64
UniRef50_A1SZ94 Cluster: ATP-dependent RNA helicase, DEAD box fa... 37 0.64
UniRef50_Q7QWP8 Cluster: GLP_26_39935_43720; n=1; Giardia lambli... 37 0.64
UniRef50_Q5TNG3 Cluster: ENSANGP00000028953; n=1; Anopheles gamb... 37 0.64
UniRef50_Q8SRQ1 Cluster: PRE-mRNA SPLICING HELICASE; n=1; Enceph... 37 0.64
UniRef50_Q5A0Z8 Cluster: Potential spliceosomal U5 snRNP RNA hel... 37 0.64
UniRef50_Q977E4 Cluster: Putative uncharacterized protein ST0003... 37 0.64
UniRef50_P53327 Cluster: Antiviral helicase SLH1; n=11; Saccharo... 37 0.64
UniRef50_UPI0000DAE42A Cluster: hypothetical protein Rgryl_01000... 36 0.85
UniRef50_Q0F085 Cluster: Transcription-repair coupling factor; n... 36 0.85
UniRef50_Q5D892 Cluster: Meiotic recombination protein MER3; n=3... 36 0.85
UniRef50_A5K861 Cluster: Hsp70 interacting protein, putative; n=... 36 0.85
UniRef50_A5E7Q8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.85
UniRef50_A0B8I7 Cluster: DEAD/DEAH box helicase domain protein; ... 36 0.85
UniRef50_Q6ZM94 Cluster: Novel protein similar to humna DNA-dire... 36 1.1
UniRef50_Q7TQC0 Cluster: DNA polymerase Q; n=17; Tetrapoda|Rep: ... 36 1.1
UniRef50_Q4XQZ9 Cluster: DNA-directed DNA polymerase, putative; ... 36 1.1
UniRef50_Q4WA08 Cluster: DEAD/DEAH box helicase, putative; n=18;... 36 1.1
UniRef50_A7TG42 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A2QC88 Cluster: Contig An02c0070, complete genome; n=2;... 36 1.1
UniRef50_UPI00015B95C6 Cluster: UPI00015B95C6 related cluster; n... 36 1.5
UniRef50_UPI0000F51710 Cluster: hypothetical protein Faci_030012... 36 1.5
UniRef50_A6DQ79 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.5
UniRef50_A5CVJ9 Cluster: Transcription-repair coupling factor; n... 36 1.5
UniRef50_Q9FNQ1 Cluster: RNA helicase; n=6; Eukaryota|Rep: RNA h... 36 1.5
UniRef50_A2XDW7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q6BCJ9 Cluster: Dicer-related RNase III protein Dcr2p; ... 36 1.5
UniRef50_Q5CTJ2 Cluster: U5 small nuclear ribonucleoprotein 200k... 36 1.5
UniRef50_A2FQ89 Cluster: Type III restriction enzyme, res subuni... 36 1.5
UniRef50_Q6BM64 Cluster: Similar to ca|CA4212|CaHFM1 Candida alb... 36 1.5
UniRef50_A5DX50 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q8N3C0 Cluster: Activating signal cointegrator 1 comple... 36 1.5
UniRef50_UPI0000D572BA Cluster: PREDICTED: similar to CG6019-PA;... 35 2.0
UniRef50_UPI0000D55FC7 Cluster: PREDICTED: similar to Activator ... 35 2.0
UniRef50_A7K9K7 Cluster: Putative uncharacterized protein z597L;... 35 2.0
UniRef50_Q2LTH9 Cluster: Dead/deah box helicase; n=1; Syntrophus... 35 2.0
UniRef50_A6DGJ9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q013J2 Cluster: RNA helicase; n=4; Viridiplantae|Rep: R... 35 2.0
UniRef50_Q2H051 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q5V3H2 Cluster: ATP-dependent DNA helicase; n=3; Haloba... 35 2.0
UniRef50_O14777 Cluster: Kinetochore protein Hec1; n=24; Tetrapo... 35 2.0
UniRef50_UPI00015BCC5B Cluster: UPI00015BCC5B related cluster; n... 35 2.6
UniRef50_UPI000049974C Cluster: cation-transporting P-typeATPase... 35 2.6
UniRef50_Q8ILK9 Cluster: DNA-directed DNA polymerase, putative; ... 35 2.6
UniRef50_Q4Y6S3 Cluster: Elongation factor g, putative; n=4; Pla... 35 2.6
UniRef50_A2DUA0 Cluster: Type III restriction enzyme, res subuni... 35 2.6
UniRef50_A7TSN3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A7DQP8 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.6
UniRef50_UPI00015BB0F2 Cluster: DEAD/DEAH box helicase domain pr... 34 3.4
UniRef50_A5TVE6 Cluster: ATP-dependent DNA helicase; n=3; Fusoba... 34 3.4
UniRef50_A7PDB5 Cluster: Chromosome chr17 scaffold_12, whole gen... 34 3.4
UniRef50_Q7R3U5 Cluster: GLP_82_25208_20250; n=1; Giardia lambli... 34 3.4
UniRef50_A7AM78 Cluster: Sec63 domain containing protein; n=1; B... 34 3.4
UniRef50_Q6L0N7 Cluster: ATP-dependent helicase; n=2; Thermoplas... 34 3.4
UniRef50_Q8D3A2 Cluster: Mfd protein; n=1; Wigglesworthia glossi... 34 4.5
UniRef50_Q6LRR7 Cluster: Hypothetical ATP-dependent helicase; n=... 34 4.5
UniRef50_Q3YT70 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 34 4.5
UniRef50_Q7QWP9 Cluster: GLP_26_36454_39915; n=1; Giardia lambli... 34 4.5
UniRef50_Q235I9 Cluster: Type III restriction enzyme, res subuni... 34 4.5
UniRef50_Q5A336 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A7EMW8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_Q46DX3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_Q8WZ42 Cluster: Titin; n=65; Eukaryota|Rep: Titin - Hom... 34 4.5
UniRef50_UPI000023CDFD Cluster: hypothetical protein FG10130.1; ... 33 6.0
UniRef50_A3JDX5 Cluster: Lhr-like helicase; n=2; Gammaproteobact... 33 6.0
UniRef50_A0YUQ6 Cluster: ATP-dependent RNA helicase, putative; n... 33 6.0
UniRef50_A0KYJ4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_A4GSN8 Cluster: Nuclear-pore anchor; n=7; Arabidopsis t... 33 6.0
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 33 6.0
UniRef50_Q55CI8 Cluster: DEAD/DEAH box helicase; n=3; Eukaryota|... 33 6.0
UniRef50_Q4Q5E2 Cluster: DEAD/DEAH box helicase-like protein, pu... 33 6.0
UniRef50_Q97B15 Cluster: Putative uncharacterized protein TVG064... 33 6.0
UniRef50_Q989J4 Cluster: Conjugal transfer protein; TraB; n=7; A... 33 7.9
UniRef50_O67347 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_A5VLE1 Cluster: Type III restriction protein, res subun... 33 7.9
UniRef50_Q0J3U9 Cluster: Os08g0551800 protein; n=22; Oryza sativ... 33 7.9
UniRef50_Q4YUM9 Cluster: Putative uncharacterized protein; n=5; ... 33 7.9
UniRef50_A2GDW9 Cluster: Endonuclease, putative; n=2; Trichomona... 33 7.9
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 33 7.9
UniRef50_Q6CIY0 Cluster: Similar to sp|P43597 Saccharomyces cere... 33 7.9
UniRef50_Q000R0 Cluster: RING-10 protein; n=2; Gibberella zeae|R... 33 7.9
UniRef50_A2BLQ0 Cluster: Predicted helicase; n=1; Hyperthermus b... 33 7.9
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 33 7.9
>UniRef50_P42285 Cluster: Superkiller viralicidic activity 2-like 2;
n=32; Eukaryota|Rep: Superkiller viralicidic activity
2-like 2 - Homo sapiens (Human)
Length = 1042
Score = 239 bits (585), Expect = 5e-62
Identities = 119/192 (61%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Frame = +3
Query: 201 ELTAAGNKRAHDDIQYADTSV-SKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCT 377
E T G + D + D + KKPR EE +E D+++ L R+ + ++ET EGCT
Sbjct: 55 ESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITE---DLSLADLMPRVKVQSVETVEGCT 111
Query: 378 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 557
HEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV A
Sbjct: 112 HEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCA 171
Query: 558 EYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEI 737
EYAIAL+L+ KQRVI+T+PIKALSNQKYRE EEF DVGL+TGDVTINP+ASCL+MTTEI
Sbjct: 172 EYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEI 231
Query: 738 LRNMLYRGSEIM 773
LR+MLYRGSE+M
Sbjct: 232 LRSMLYRGSEVM 243
>UniRef50_Q23223 Cluster: Uncharacterized helicase W08D2.7; n=3;
Bilateria|Rep: Uncharacterized helicase W08D2.7 -
Caenorhabditis elegans
Length = 1026
Score = 231 bits (565), Expect = 1e-59
Identities = 129/233 (55%), Positives = 161/233 (69%), Gaps = 15/233 (6%)
Frame = +3
Query: 120 DCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRA-----------HDDIQYA--DTS 260
D FDE ++ +V+ + +E+L +A ++A H+D+ D +
Sbjct: 3 DLFDEFIEPGVKNEIMDVEEAPENPMEKLDSAKKRQAREDMTNLLANMHNDVGVGNFDEA 62
Query: 261 VSKKPREEEEDSELITDINVDLLQSRIVIHTLET-HEGCTHEVAIPPNQEYAPLLPLT-T 434
SK+ R EEE+ + + ++ I++HT+ T +E CTHEVAIPPN E+A L + T
Sbjct: 63 TSKRARVEEEEE--VEEARME----NIIVHTIRTDNENCTHEVAIPPNAEFAELRENSGT 116
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
EP K Y F LD FQK+AILCIDN QSVLVSAHTSAGKTVVA YAIA L+ KQRVIYT+P
Sbjct: 117 EPAKYYPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSP 176
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IKALSNQKYRE EEF DVGL+TGDVT+NP ASCL+MTTEILR+MLYRGSEIM
Sbjct: 177 IKALSNQKYRELEEEFKDVGLMTGDVTLNPDASCLVMTTEILRSMLYRGSEIM 229
>UniRef50_P47047 Cluster: ATP-dependent RNA helicase DOB1; n=29;
Dikarya|Rep: ATP-dependent RNA helicase DOB1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1073
Score = 196 bits (479), Expect = 4e-49
Identities = 95/133 (71%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
Frame = +3
Query: 378 HEVAIPPNQEYAPLLP-LTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 554
H+VA+PPN +Y P+ + Y F LDPFQ AI CID +SVLVSAHTSAGKTVV
Sbjct: 121 HQVALPPNYDYTPIAEHKRVNEARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVV 180
Query: 555 AEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTE 734
AEYAIA SLKNKQRVIYT+PIKALSNQKYRE EF DVGL+TGD+TINP A CL+MTTE
Sbjct: 181 AEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTE 240
Query: 735 ILRNMLYRGSEIM 773
ILR+MLYRGSE+M
Sbjct: 241 ILRSMLYRGSEVM 253
>UniRef50_UPI0000498B4A Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 977
Score = 195 bits (476), Expect = 9e-49
Identities = 108/190 (56%), Positives = 129/190 (67%), Gaps = 11/190 (5%)
Frame = +3
Query: 237 DIQYADTSVSKKPREEEEDSE-------LITDINVDLLQSRIVIHTLET-HEGCTHEVAI 392
D +T + +EEEE +E +I D DLL LE ++GCTHEVA+
Sbjct: 10 DFLQPETQNKDEAKEEEEINEYLMKRRKIIEDKYKDLLPRPESTPILEAQYQGCTHEVAV 69
Query: 393 PPNQEYAP--LLP-LTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEY 563
P Q L P TEP K Y F LD FQ+ ++ CI +SVLVSAHTSAGKT VAEY
Sbjct: 70 PDGQVATEQTLNPQYPTEPAKTYPFTLDDFQRLSVSCIGQNESVLVSAHTSAGKTAVAEY 129
Query: 564 AIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILR 743
AIA +LKN QRVIYT+PIKALSNQKYR+ E+F DVGLITGD+TIN ASCL+MTTEILR
Sbjct: 130 AIASALKNNQRVIYTSPIKALSNQKYRDLQEQFTDVGLITGDITINEEASCLVMTTEILR 189
Query: 744 NMLYRGSEIM 773
NMLYRG+++M
Sbjct: 190 NMLYRGNDVM 199
>UniRef50_O14232 Cluster: Uncharacterized helicase C6F12.16c; n=6;
Eukaryota|Rep: Uncharacterized helicase C6F12.16c -
Schizosaccharomyces pombe (Fission yeast)
Length = 1117
Score = 193 bits (471), Expect = 4e-48
Identities = 93/142 (65%), Positives = 112/142 (78%), Gaps = 2/142 (1%)
Frame = +3
Query: 354 LETHEGCTHEVAIPPNQEYAPLLPLTTE--PVKQYSFILDPFQKEAILCIDNLQSVLVSA 527
+E H+V+IPPN +Y P+ + P + Y F LDPFQ +I CI+ +SVLVSA
Sbjct: 161 VELRHQVRHQVSIPPNYDYVPISKHKSPIPPARTYPFTLDPFQAVSIACIERQESVLVSA 220
Query: 528 HTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPS 707
HTSAGKTVVAEYA+A SL++KQRVIYT+PIKALSNQKYRE EF DVGL+TGDVTINP
Sbjct: 221 HTSAGKTVVAEYAVAQSLRDKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTINPD 280
Query: 708 ASCLIMTTEILRNMLYRGSEIM 773
A+CL+MTTEILR+MLYRGSE+M
Sbjct: 281 ATCLVMTTEILRSMLYRGSEVM 302
>UniRef50_A5E6C5 Cluster: ATP-dependent RNA helicase DOB1; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep:
ATP-dependent RNA helicase DOB1 - Lodderomyces
elongisporus (Yeast) (Saccharomyces elongisporus)
Length = 970
Score = 193 bits (470), Expect = 5e-48
Identities = 115/242 (47%), Positives = 149/242 (61%), Gaps = 19/242 (7%)
Frame = +3
Query: 105 INSLFDCFDETPITEAAIQL----PNVKNVEK--PKLEELTAAGNKRAHDDIQYADTSVS 266
++ LFD FDE P I+ N ++ K K+ E N+ ++ + +
Sbjct: 1 MDDLFDVFDEAPQAVPKIEEIQENENKRSERKRPQKVVEKKELENESEQEEQEDDTMPKA 60
Query: 267 KKPREEEEDSELITDINVDLLQSRIVIHT------------LETHEGCTHEVAIPPNQEY 410
KK +++ E ++ D ++++ SR V + L+ H+VA+PP+ Y
Sbjct: 61 KKAKKQPEIKPVVYD-DLEIEASREVSASGGLQQTEEPNAKLKLKHQVRHQVAVPPDYPY 119
Query: 411 APLLPLTTE-PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 587
P+ + K Y F LDPFQ AI CID +SVLVSAHTSAGKTVVAEYAIA SL+
Sbjct: 120 IPISEHKRKHEAKTYPFTLDPFQDTAISCIDRSESVLVSAHTSAGKTVVAEYAIAQSLRE 179
Query: 588 KQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSE 767
KQRVIYT+PIKALSNQKYRE EF DVGL+TGDVTINP A CL+MTTEILR+MLYRGSE
Sbjct: 180 KQRVIYTSPIKALSNQKYRELQAEFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSE 239
Query: 768 IM 773
+M
Sbjct: 240 VM 241
>UniRef50_O13799 Cluster: Uncharacterized helicase C17H9.02; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized helicase
C17H9.02 - Schizosaccharomyces pombe (Fission yeast)
Length = 1030
Score = 188 bits (458), Expect = 1e-46
Identities = 92/135 (68%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Frame = +3
Query: 378 HEVAIPPNQEYAPL---LPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKT 548
H+V +P + +Y PL +P + P K Y F LDPFQ AI C++ ++SVLVSAHTSAGKT
Sbjct: 96 HKVVVPDDYDYIPLNKHIP-SDPPAKTYPFELDPFQSTAIKCVERMESVLVSAHTSAGKT 154
Query: 549 VVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMT 728
V+AEYAIA +LKN+QRVIYT+PIK+LSNQKYRE EF DVGL+TGDV+INPSASCLIMT
Sbjct: 155 VIAEYAIAQALKNRQRVIYTSPIKSLSNQKYRELLSEFGDVGLMTGDVSINPSASCLIMT 214
Query: 729 TEILRNMLYRGSEIM 773
TEILR MLY+ SEIM
Sbjct: 215 TEILRAMLYKNSEIM 229
>UniRef50_A0DE61 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_47, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 963
Score = 180 bits (438), Expect = 4e-44
Identities = 89/165 (53%), Positives = 119/165 (72%)
Frame = +3
Query: 279 EEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSF 458
E + + E+ ++ I + +EGC HE P ++Y P+ + KQY F
Sbjct: 19 ENQVEEEVSMNVEAQEKVEAFKIIKNQENEGCIHEWYTP--EDYQPIQE-KKQNAKQYKF 75
Query: 459 ILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQK 638
LDPFQK A+ +++ +SVLV+AHTSAGKT VAEYAIA++ ++KQRV+YT+PIKALSNQK
Sbjct: 76 TLDPFQKVAVKTLESNESVLVAAHTSAGKTAVAEYAIAMAKRDKQRVVYTSPIKALSNQK 135
Query: 639 YREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
YRE +EF DVGL+TGDVT+N +A CL+MTTEILR+MLYRGSEI+
Sbjct: 136 YRELQQEFGDVGLVTGDVTLNENAFCLVMTTEILRSMLYRGSEIV 180
>UniRef50_A7AUA6 Cluster: DSHCT (NUC185) domain containing DEAD/DEAH
box helicase family protein; n=1; Babesia bovis|Rep:
DSHCT (NUC185) domain containing DEAD/DEAH box helicase
family protein - Babesia bovis
Length = 986
Score = 178 bits (434), Expect = 1e-43
Identities = 88/149 (59%), Positives = 110/149 (73%)
Frame = +3
Query: 327 LQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNL 506
L S++V L + C+H P E P P EP + Y F LD FQK +I C++
Sbjct: 41 LASQVVQERLPAGKNCSHHRLRPVTYETPPYEP--GEPARSYPFTLDDFQKRSIECLEKG 98
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITG 686
+SVLV AHTSAGKTVVAEYAIA+ L++K+R+IYT+PIKALSNQKYR +EF DVGL+TG
Sbjct: 99 ESVLVCAHTSAGKTVVAEYAIAMGLRDKRRIIYTSPIKALSNQKYRNLCDEFVDVGLMTG 158
Query: 687 DVTINPSASCLIMTTEILRNMLYRGSEIM 773
DVT+NP AS ++MTTEILR+MLYRGSEI+
Sbjct: 159 DVTLNPDASVMVMTTEILRSMLYRGSEIV 187
>UniRef50_Q8SS39 Cluster: Putative ATP-DEPENDENT RNA HELICASE; n=1;
Encephalitozoon cuniculi|Rep: Putative ATP-DEPENDENT RNA
HELICASE - Encephalitozoon cuniculi
Length = 933
Score = 177 bits (431), Expect = 3e-43
Identities = 88/150 (58%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Frame = +3
Query: 327 LQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPV-KQYSFILDPFQKEAILCIDN 503
L+ R + G HE +P Y L +P K Y F LD FQK ++ ++
Sbjct: 25 LERRTTVTDRIDRNGTRHEAVVPVGAAYTLLPKQFCKPAAKNYLFELDDFQKISVCSLER 84
Query: 504 LQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLIT 683
+SVLVSAHTS+GKTVVAEYAIA+SL++ QRV+YT+PIKALSNQKYRE EF DVGL+T
Sbjct: 85 DESVLVSAHTSSGKTVVAEYAIAMSLRSNQRVVYTSPIKALSNQKYRELLSEFSDVGLMT 144
Query: 684 GDVTINPSASCLIMTTEILRNMLYRGSEIM 773
GDVTINP+ASCL+MTTEILRNMLYRG E++
Sbjct: 145 GDVTINPTASCLVMTTEILRNMLYRGGEVV 174
>UniRef50_Q9ZVW2 Cluster: Expressed protein; n=5; Viridiplantae|Rep:
Expressed protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 995
Score = 176 bits (429), Expect = 4e-43
Identities = 95/177 (53%), Positives = 122/177 (68%), Gaps = 11/177 (6%)
Frame = +3
Query: 276 REEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE-----P 440
R+E E S+L +D + R +L+ C HEVA+P +Y P T P
Sbjct: 14 RKESESSKLRSD-ETPTPEPRTKRRSLK--RACVHEVAVP--NDYTPTKEETIHGTLDNP 68
Query: 441 V------KQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVI 602
V K Y F LDPFQ ++ C++ +S+LVSAHTSAGKT VAEYAIA++ ++KQRVI
Sbjct: 69 VFNGDMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVI 128
Query: 603 YTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
YT+P+KALSNQKYRE EF DVGL+TGDVT++P+ASCL+MTTEILR MLYRGSE++
Sbjct: 129 YTSPLKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEVL 185
>UniRef50_A5K1L9 Cluster: ATP dependent RNA helicase, putative; n=8;
Plasmodium|Rep: ATP dependent RNA helicase, putative -
Plasmodium vivax
Length = 1387
Score = 175 bits (425), Expect = 1e-42
Identities = 86/144 (59%), Positives = 107/144 (74%)
Frame = +3
Query: 339 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVL 518
+V+ + C H+ I P L T P + Y F LD FQK++I C++ +SVL
Sbjct: 224 LVLEEFRSDVNCIHK-CIRPRSYVHNKLSETLTPARTYKFELDTFQKKSIECLERNESVL 282
Query: 519 VSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTI 698
VSAHTSAGKTV+AEYAIAL L++KQRVIYT+PIKALSNQKYR+ SEEF DVGLITGD++I
Sbjct: 283 VSAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLSEEFKDVGLITGDISI 342
Query: 699 NPSASCLIMTTEILRNMLYRGSEI 770
N AS ++MTTEILR+MLYRGS +
Sbjct: 343 NTDASIIVMTTEILRSMLYRGSSL 366
>UniRef50_A7PFD4 Cluster: Chromosome chr11 scaffold_14, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr11 scaffold_14, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 995
Score = 173 bits (422), Expect = 3e-42
Identities = 84/143 (58%), Positives = 110/143 (76%), Gaps = 9/143 (6%)
Frame = +3
Query: 372 CTHEVAIP---PNQEYAPLLPLTTEPV------KQYSFILDPFQKEAILCIDNLQSVLVS 524
C HE A+P + + + + PV K Y F LDPFQ+ ++ C++ +SVLVS
Sbjct: 39 CVHEAAVPVGYTSNKDESVHGTLSNPVYNGKMAKTYPFTLDPFQQVSVACLERNESVLVS 98
Query: 525 AHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINP 704
AHTSAGKT VAEY+IA++ ++KQRVIYT+P+KALSNQKYRE S+EF DVGL+TGDVT++P
Sbjct: 99 AHTSAGKTAVAEYSIAMAFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLSP 158
Query: 705 SASCLIMTTEILRNMLYRGSEIM 773
+ASCL+MTTEILR MLYRGSE++
Sbjct: 159 NASCLVMTTEILRGMLYRGSEVL 181
>UniRef50_A2ZC12 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 947
Score = 173 bits (422), Expect = 3e-42
Identities = 87/143 (60%), Positives = 110/143 (76%), Gaps = 9/143 (6%)
Frame = +3
Query: 372 CTHEVAIPPN----QEYAPLLPLTT-----EPVKQYSFILDPFQKEAILCIDNLQSVLVS 524
C HEVA+P ++ A L++ E K Y F LDPFQ +I C++ +SVLVS
Sbjct: 45 CIHEVAVPKGYAAAKDEAVHGTLSSPAFHGEMAKAYPFQLDPFQSVSIACLERNESVLVS 104
Query: 525 AHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINP 704
AHTSAGKT +AEYAIA+S ++KQRVIYT+P+KALSNQKYRE S+EF DVGL+TGDVT+ P
Sbjct: 105 AHTSAGKTAIAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLQP 164
Query: 705 SASCLIMTTEILRNMLYRGSEIM 773
+A+CL+MTTEILR MLYRGSE++
Sbjct: 165 NATCLVMTTEILRAMLYRGSEVI 187
>UniRef50_Q016S7 Cluster: ATP-dependent RNA helicase, putative; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase, putative -
Ostreococcus tauri
Length = 1018
Score = 173 bits (420), Expect = 5e-42
Identities = 78/114 (68%), Positives = 99/114 (86%)
Frame = +3
Query: 432 TEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTT 611
T+P K Y F LD FQ++A+ ++ +SVLVSAHTSAGKTVVAEYAIA+++++ QRV+YT+
Sbjct: 72 TKPAKSYPFELDTFQQKAVEVLERKESVLVSAHTSAGKTVVAEYAIAMAIRDGQRVVYTS 131
Query: 612 PIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
P+KALSNQKYRE EEF DVGL+TGDV INPSASCL+MTTE+LR+MLY+G E+M
Sbjct: 132 PLKALSNQKYRELREEFEDVGLMTGDVVINPSASCLVMTTEVLRSMLYKGGEVM 185
>UniRef50_Q4UEM0 Cluster: ATP-dependent RNA helicase, putative; n=2;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria annulata
Length = 1027
Score = 170 bits (414), Expect = 3e-41
Identities = 87/149 (58%), Positives = 111/149 (74%)
Frame = +3
Query: 327 LQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNL 506
L S I I + + C+H P + +Y P +TT K+Y F LD FQK +I ++
Sbjct: 58 LTSDIKIEKIHSSYNCSHYRVAPVDSKYEPK-NITTF-AKKYPFTLDEFQKRSIESLERD 115
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITG 686
+SVLV AHTSAGKTVVAEYAIA+ L++ R+IYT+PIKALSNQKYR S+EF DVGL+TG
Sbjct: 116 ESVLVCAHTSAGKTVVAEYAIAMGLRDGHRIIYTSPIKALSNQKYRNLSDEFVDVGLMTG 175
Query: 687 DVTINPSASCLIMTTEILRNMLYRGSEIM 773
DVT+NP+AS ++MTTEILR+MLYRGSEI+
Sbjct: 176 DVTLNPNASVMVMTTEILRSMLYRGSEIV 204
>UniRef50_A6REV7 Cluster: Antiviral helicase SKI2; n=1; Ajellomyces
capsulatus NAm1|Rep: Antiviral helicase SKI2 -
Ajellomyces capsulatus NAm1
Length = 1298
Score = 169 bits (411), Expect = 7e-41
Identities = 90/201 (44%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
Frame = +3
Query: 174 KNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLLQSRIVIHT 353
+ V++P E L+ + D Q + S EEE+D + + + L+ R + T
Sbjct: 251 EGVDEPTEERLSLGVERNIRTDEQLQEGISSD---EEEQDIDSLLPVEYPALEPRNQLLT 307
Query: 354 LETHEGCTHEV-AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAH 530
+ +G + N+E L + +++ F LD FQKEA+ ++N SV V+AH
Sbjct: 308 STSKKGSKEWAHVVDINKEITNFYDLVPDMAREWPFELDTFQKEAVYHLENGDSVFVAAH 367
Query: 531 TSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSA 710
TSAGKTVVAEYAIAL+ K+ + IYT+PIKALSNQK+R+F F DVG++TGDV INP A
Sbjct: 368 TSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDFRNTFEDVGILTGDVQINPEA 427
Query: 711 SCLIMTTEILRNMLYRGSEIM 773
SCLIMTTEILR+MLYRG++++
Sbjct: 428 SCLIMTTEILRSMLYRGADLI 448
>UniRef50_Q550D0 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 1378
Score = 163 bits (397), Expect = 3e-39
Identities = 74/121 (61%), Positives = 101/121 (83%)
Frame = +3
Query: 411 APLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNK 590
+PL L T P +Y F LD FQK+AI+ ++ +SV ++AHTSAGKTV+AEYAIA++ KN
Sbjct: 417 SPLSDLITNPAIEYPFDLDSFQKQAIVHMEQGESVFITAHTSAGKTVIAEYAIAMAAKNM 476
Query: 591 QRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
R IYT+PIKALSNQK+R+F F+DVGLITGDV+I+PS+SCL++TTEILR+MLY+G+++
Sbjct: 477 TRAIYTSPIKALSNQKFRDFKNTFNDVGLITGDVSISPSSSCLVLTTEILRSMLYKGADL 536
Query: 771 M 773
+
Sbjct: 537 I 537
>UniRef50_UPI0000E4A659 Cluster: PREDICTED: similar to ankyrin
2,3/unc44, partial; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ankyrin 2,3/unc44,
partial - Strongylocentrotus purpuratus
Length = 1175
Score = 159 bits (387), Expect = 5e-38
Identities = 75/109 (68%), Positives = 92/109 (84%)
Frame = +3
Query: 447 QYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 626
QY F LD FQK+A+L ++N QSV V+AHTSAGKTVVAEYAIALS+++ R +YT+PIKAL
Sbjct: 982 QYPFELDIFQKQAVLQLENHQSVFVAAHTSAGKTVVAEYAIALSMRHLTRTVYTSPIKAL 1041
Query: 627 SNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
SNQK+R+F F DVGL+TGDV I P ASCLIMTTEILR+MLY GS+++
Sbjct: 1042 SNQKFRDFKNTFGDVGLLTGDVQIKPEASCLIMTTEILRSMLYNGSDVI 1090
>UniRef50_Q1LWQ1 Cluster: Novel protein similar to vertebrate
superkiller viralicidic activity 2-like 2; n=2; Danio
rerio|Rep: Novel protein similar to vertebrate
superkiller viralicidic activity 2-like 2 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 1230
Score = 159 bits (386), Expect = 7e-38
Identities = 83/142 (58%), Positives = 101/142 (71%), Gaps = 2/142 (1%)
Frame = +3
Query: 354 LETHEGCTHEVAIPPN--QEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSA 527
LE +G + AIP + A +P +Y F LD FQK+AIL ++ SV V+A
Sbjct: 281 LEEEKGDNKKWAIPVDISSPCADFYKRIPDPAFKYPFELDVFQKQAILRLEAHDSVFVAA 340
Query: 528 HTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPS 707
HTSAGKTVVAEYAIALS K+ R IYT+PIKALSNQK+R+F F DVGL+TGDV +NP
Sbjct: 341 HTSAGKTVVAEYAIALSQKHMTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLNPE 400
Query: 708 ASCLIMTTEILRNMLYRGSEIM 773
SCLIMTTEILR+MLY GSE++
Sbjct: 401 GSCLIMTTEILRSMLYNGSEVI 422
>UniRef50_A2G2R0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 963
Score = 159 bits (386), Expect = 7e-38
Identities = 77/132 (58%), Positives = 95/132 (71%)
Frame = +3
Query: 378 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 557
H VA+P + + EP+ QY F LD FQK A+ C+ +SVLVSAHTSAGKT +A
Sbjct: 29 HYVALPDGKTSIDPVDFPKEPLLQYDFELDEFQKTAVACVHRNESVLVSAHTSAGKTAIA 88
Query: 558 EYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEI 737
YAI ++ + RVIYT+PIKALSNQKYRE E+F +VGLITGDVT+N SA L+MTTEI
Sbjct: 89 LYAIQSAINSNSRVIYTSPIKALSNQKYRELKEQFGEVGLITGDVTVNSSAPILVMTTEI 148
Query: 738 LRNMLYRGSEIM 773
LR MLYRG ++
Sbjct: 149 LRMMLYRGDSLI 160
>UniRef50_Q2U010 Cluster: Cytoplasmic exosomal RNA helicase SKI2;
n=14; Pezizomycotina|Rep: Cytoplasmic exosomal RNA
helicase SKI2 - Aspergillus oryzae
Length = 1298
Score = 158 bits (384), Expect = 1e-37
Identities = 79/165 (47%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Frame = +3
Query: 282 EEEDSELITDINVDLLQSRI-VIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSF 458
+EED + + + L+ R ++ ++ G + N++ L + +++ F
Sbjct: 262 DEEDIDSLLPVEFPALEPRAPLLSGVQKKGGREWAHVVDVNKDIPNFSELVPDMAREWPF 321
Query: 459 ILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQK 638
LD FQKEA+ +++ SV V+AHTSAGKTVVAEYAIAL+ K+ + IYT+PIKALSNQK
Sbjct: 322 ELDTFQKEAVYHLESGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQK 381
Query: 639 YREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
+R+F F DVG++TGDV INP ASCLIMTTEILR+MLYRG++++
Sbjct: 382 FRDFRTTFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLI 426
>UniRef50_P35207 Cluster: Antiviral helicase SKI2; n=9;
Saccharomycetales|Rep: Antiviral helicase SKI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1287
Score = 158 bits (384), Expect = 1e-37
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Frame = +3
Query: 177 NVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLLQSRIVIHTL 356
N K K EE +A K ++I T + ++ + + + I +D +++ V ++
Sbjct: 240 NEAKLKEEEKSA---KSISEEIMEEATEETTADNADDAEIDELLPIGIDFGRTKPVSKSV 296
Query: 357 ETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTS 536
+ H V + N + L P + + F LD FQKEA+ ++ SV V+AHTS
Sbjct: 297 PVKKEWAHVVDL--NHKIENFDELIPNPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTS 354
Query: 537 AGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDV--GLITGDVTINPSA 710
AGKTVVAEYAIA++ +N + IYT+PIKALSNQK+R+F E F DV GLITGDV INP A
Sbjct: 355 AGKTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDA 414
Query: 711 SCLIMTTEILRNMLYRGSEIM 773
+CLIMTTEILR+MLYRG++++
Sbjct: 415 NCLIMTTEILRSMLYRGADLI 435
>UniRef50_Q19103 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1266
Score = 158 bits (383), Expect = 2e-37
Identities = 73/123 (59%), Positives = 98/123 (79%)
Frame = +3
Query: 405 EYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 584
EY L+P ++Y F LDPFQ+ ++LC++ +S+ V+AHTSAGKTVVAEYAIAL
Sbjct: 277 EYKRLVPTMA---RKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQA 333
Query: 585 NKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGS 764
+K R +YT+PIKALSNQK+R+F + F DVGL+TGD+ ++P A+CLIMTTEILR+MLY GS
Sbjct: 334 HKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGS 393
Query: 765 EIM 773
E++
Sbjct: 394 EVI 396
>UniRef50_A0BIQ8 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1486
Score = 157 bits (382), Expect = 2e-37
Identities = 71/110 (64%), Positives = 93/110 (84%)
Frame = +3
Query: 444 KQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKA 623
KQ+ F LD FQK +IL ++ +SV V AHTSAGKTV+AEYAIAL+ K+ +R +YT+PIKA
Sbjct: 442 KQFQFELDDFQKRSILHLEKKESVFVCAHTSAGKTVIAEYAIALAFKHNRRALYTSPIKA 501
Query: 624 LSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
LSNQK+REF ++F + G++TGDV+INP A CLI+TTEILRNMLYRG+E++
Sbjct: 502 LSNQKFREFDQKFGNTGVVTGDVSINPGAPCLILTTEILRNMLYRGAELI 551
>UniRef50_Q23RU2 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 1392
Score = 157 bits (381), Expect = 3e-37
Identities = 87/180 (48%), Positives = 119/180 (66%), Gaps = 6/180 (3%)
Frame = +3
Query: 252 DTSVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGC--THEVAIPPNQE---YAP 416
D V++ EE+ L++ N + E E ++ A+ NQ+ +
Sbjct: 328 DELVNEPQNNEEDQYSLLSSTNPQKFFKEAKLKETEQVEALFQKNQWAVEDNQDVSIFQD 387
Query: 417 LLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR 596
LP + QY F LD FQK +IL ++ Q+V V AHTSAGKTVVAEY+IAL+ K K++
Sbjct: 388 KLPKERMAI-QYPFELDNFQKRSILRLEEGQNVFVCAHTSAGKTVVAEYSIALAKKLKRK 446
Query: 597 VIYTTPIKALSNQKYREFSEEF-HDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IYT+PIKALSNQKYR+F E+F DVG+ITGDV++NP+ASCLI+TTE+LRNMLY+G +I+
Sbjct: 447 AIYTSPIKALSNQKYRDFKEKFGDDVGIITGDVSLNPTASCLIVTTEVLRNMLYKGHDIV 506
>UniRef50_A2R7X2 Cluster: Similarity to viral mRNA translation
inhibitor Ski2 - Saccharomyces cerevisiae; n=2;
Pezizomycotina|Rep: Similarity to viral mRNA translation
inhibitor Ski2 - Saccharomyces cerevisiae - Aspergillus
niger
Length = 1262
Score = 156 bits (379), Expect = 5e-37
Identities = 89/216 (41%), Positives = 128/216 (59%)
Frame = +3
Query: 126 FDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELI 305
F+E EAA V++ + + +L + A D ++ EE+ DS L
Sbjct: 210 FEEAKTKEAAEGDEEVEHALQQEETDLHVEQEETASDAGGVKIDDEAELSDEEDIDSLLP 269
Query: 306 TDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEA 485
+ + ++ + G + N+E L + +++ F LD FQKEA
Sbjct: 270 VEFPALEPHAPLLAGMQQRKAGKEWAHVVDVNKEIPNFRDLVPDMAREWPFELDTFQKEA 329
Query: 486 ILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFH 665
+ ++ SV V+AHTSAGKTVVAEYAI+L+ K+ + IYT+PIKALSNQK+R+F EF
Sbjct: 330 VYHLECGDSVFVAAHTSAGKTVVAEYAISLAAKHMTKAIYTSPIKALSNQKFRDFRTEFD 389
Query: 666 DVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
DVG++TGDV INP ASCLIMTTEILR+MLYRG++++
Sbjct: 390 DVGILTGDVQINPEASCLIMTTEILRSMLYRGADLI 425
>UniRef50_Q5CVW7 Cluster: Mtr4p like SKI family SFII helicase; n=2;
Cryptosporidium|Rep: Mtr4p like SKI family SFII helicase
- Cryptosporidium parvum Iowa II
Length = 1280
Score = 155 bits (377), Expect = 9e-37
Identities = 75/114 (65%), Positives = 94/114 (82%), Gaps = 2/114 (1%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPI 617
P K+YSF LD FQ +I C++ +SVL+SAHTSAGKT VAEYAIA++LK+ QRV+YT+PI
Sbjct: 92 PAKEYSFKLDTFQAVSIGCLEIGESVLISAHTSAGKTCVAEYAIAMALKSNQRVVYTSPI 151
Query: 618 KALSNQKYREFSEEFHD--VGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
KALSNQKYR+ F D VGL+TGDVT+NP S ++MTTEILR+MLYRGSE++
Sbjct: 152 KALSNQKYRDLRTTFGDNNVGLLTGDVTVNPLGSIMVMTTEILRSMLYRGSELV 205
>UniRef50_Q6CWL5 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 1001
Score = 155 bits (377), Expect = 9e-37
Identities = 86/181 (47%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Frame = +3
Query: 237 DIQYADTSVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAP 416
+++Y + + E SE+ + VDL +R + T E + N
Sbjct: 242 ELEYQKMASTAVVDEALGSSEIDKLLPVDLNFARHIRTFNNTAEKVEWAHMVDLNSNMDN 301
Query: 417 LLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR 596
L P + + F LD FQKEA+ ++ SV V+AHTSAGKTVVAEYAIA+S +N +
Sbjct: 302 FNELVPNPARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKRNMTK 361
Query: 597 VIYTTPIKALSNQKYREFSEEFH--DVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
IYT+PIKALSNQK+R+F E+F DVGLITGDV INP A CLIMTTEILR+MLYRG+++
Sbjct: 362 TIYTSPIKALSNQKFRDFKEDFDDVDVGLITGDVQINPEADCLIMTTEILRSMLYRGADL 421
Query: 771 M 773
+
Sbjct: 422 I 422
>UniRef50_Q6CH67 Cluster: Similarities with sp|P35207 Saccharomyces
cerevisiae Antiviral protein SKI2; n=2; Yarrowia
lipolytica|Rep: Similarities with sp|P35207
Saccharomyces cerevisiae Antiviral protein SKI2 -
Yarrowia lipolytica (Candida lipolytica)
Length = 1429
Score = 155 bits (376), Expect = 1e-36
Identities = 72/125 (57%), Positives = 96/125 (76%)
Frame = +3
Query: 399 NQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALS 578
N+E L +P +++ F LD FQKEA+ ++ SV V+AHTSAGKTV+AEYAIA++
Sbjct: 267 NKEITNFSELVPQPAREFPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVIAEYAIAMA 326
Query: 579 LKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYR 758
+N + IYT+PIKALSNQK+R+F EF DVG++TGDV IN AS LIMTTEILR+MLYR
Sbjct: 327 QRNMTKAIYTSPIKALSNQKFRDFKSEFDDVGILTGDVQINAEASSLIMTTEILRSMLYR 386
Query: 759 GSEIM 773
G++++
Sbjct: 387 GADLI 391
>UniRef50_UPI0001556496 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 460
Score = 154 bits (374), Expect = 2e-36
Identities = 77/120 (64%), Positives = 93/120 (77%)
Frame = +3
Query: 414 PLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQ 593
P PL P Q+ F D FQK+AIL ++ SV V+AHTSAGKTVVAEYAIALS K+
Sbjct: 45 PPPPLLPPPPPQWPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALSQKHMT 104
Query: 594 RVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
R IYT+PIKALSNQK+R+F F DVGL+TGDV ++P ASCLIMTTEILR+MLY GS+++
Sbjct: 105 RTIYTSPIKALSNQKFRDFRLTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVI 164
>UniRef50_Q9VCH8 Cluster: CG10210-PA; n=4; Diptera|Rep: CG10210-PA -
Drosophila melanogaster (Fruit fly)
Length = 1197
Score = 154 bits (373), Expect = 3e-36
Identities = 75/111 (67%), Positives = 90/111 (81%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPI 617
P + F LD FQK+AIL ++ Q V V+AHTSAGKTVVAEYAIALS ++ R IYT+PI
Sbjct: 255 PAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPI 314
Query: 618 KALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
KALSNQKYR+F + F DVGLITGD+ I P+ASCLIMTTEILR+MLY GS++
Sbjct: 315 KALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDV 365
>UniRef50_Q15477 Cluster: Helicase SKI2W; n=34; Eumetazoa|Rep:
Helicase SKI2W - Homo sapiens (Human)
Length = 1246
Score = 153 bits (372), Expect = 4e-36
Identities = 77/129 (59%), Positives = 99/129 (76%)
Frame = +3
Query: 387 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 566
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 567 IALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRN 746
IAL+ K+ R IYT+PIKALSNQK+R+F F DVGL+TGDV ++P ASCLIMTTEILR+
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRS 405
Query: 747 MLYRGSEIM 773
MLY GS+++
Sbjct: 406 MLYSGSDVI 414
>UniRef50_UPI0000660749 Cluster: superkiller viralicidic activity
2-like homolog; n=1; Takifugu rubripes|Rep: superkiller
viralicidic activity 2-like homolog - Takifugu rubripes
Length = 1127
Score = 153 bits (370), Expect = 6e-36
Identities = 76/113 (67%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNK-QRVIYTTP 614
P Q+ F LD FQK+AIL ++ SV V+AHTSAGKTVVAEYAIALS K+ +R IYT+P
Sbjct: 296 PAFQWPFELDVFQKQAILRLEQHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRRTIYTSP 355
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IKALSNQK+R+F F DVGL+TGDV I+P +SCLIMTTEILR+MLY GSE++
Sbjct: 356 IKALSNQKFRDFKNTFGDVGLLTGDVQISPESSCLIMTTEILRSMLYNGSEVI 408
>UniRef50_Q16I20 Cluster: Helicase; n=2; Endopterygota|Rep: Helicase
- Aedes aegypti (Yellowfever mosquito)
Length = 947
Score = 152 bits (369), Expect = 8e-36
Identities = 74/108 (68%), Positives = 89/108 (82%)
Frame = +3
Query: 447 QYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 626
+Y F LD FQK+AI+ ++ V V+AHTSAGKTVVAEYAIALS K+ + IYT+PIKAL
Sbjct: 4 KYPFELDIFQKQAIIKLEEHNHVFVAAHTSAGKTVVAEYAIALSKKHMTKTIYTSPIKAL 63
Query: 627 SNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
SNQKYR+F F DVGLITGD+ I+P+ASCLIMTTEILR+MLY GS+I
Sbjct: 64 SNQKYRDFKTTFQDVGLITGDIQIDPTASCLIMTTEILRSMLYCGSDI 111
>UniRef50_O59801 Cluster: RNA helicase involved in mRNA catabolism;
n=1; Schizosaccharomyces pombe|Rep: RNA helicase
involved in mRNA catabolism - Schizosaccharomyces pombe
(Fission yeast)
Length = 1213
Score = 151 bits (367), Expect = 1e-35
Identities = 74/141 (52%), Positives = 98/141 (69%)
Frame = +3
Query: 351 TLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAH 530
TL H+ + + + L E + F LD FQKEAI ++ SV V+AH
Sbjct: 244 TLNLHKQPDYAHVVDSSAPIENFQQLVPEMALDFPFELDNFQKEAIYHLEMGDSVFVAAH 303
Query: 531 TSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSA 710
TSAGKTVVAEYAIAL+ K+ + IYT+PIKALSNQK+R+F +F DVG++TGDV +NP
Sbjct: 304 TSAGKTVVAEYAIALAQKHMTKAIYTSPIKALSNQKFRDFKHKFEDVGILTGDVQVNPEG 363
Query: 711 SCLIMTTEILRNMLYRGSEIM 773
SCL+MTTEILR+MLYRG++++
Sbjct: 364 SCLLMTTEILRSMLYRGADLI 384
>UniRef50_Q23RU6 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 1406
Score = 150 bits (363), Expect = 4e-35
Identities = 71/111 (63%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
Frame = +3
Query: 444 KQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKA 623
+QY F LD FQK ++ I+ +SV V AHTSAGKTVVAEYAIA+S K ++ IYT+PIKA
Sbjct: 420 QQYPFELDAFQKRSVYRIERKESVFVCAHTSAGKTVVAEYAIAISKKLNRKAIYTSPIKA 479
Query: 624 LSNQKYREFSEEF-HDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
LSNQKYR+F +++ DVGL+TGDV +NP+A+CLI+TTEILRNMLYR ++I+
Sbjct: 480 LSNQKYRDFKQKYGDDVGLVTGDVQLNPNANCLIVTTEILRNMLYRNNDII 530
>UniRef50_Q4Q1B9 Cluster: ATP-dependent RNA helicase, putative; n=4;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 968
Score = 149 bits (362), Expect = 6e-35
Identities = 72/113 (63%), Positives = 90/113 (79%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
+P + + LD FQK +I ++ SVLVSAHTSAGKT VA YAIA +L+ K+RVIYT+P
Sbjct: 33 DPAITFPYELDTFQKTSIDALEEGDSVLVSAHTSAGKTTVALYAIAKALREKKRVIYTSP 92
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IKALSNQK+REFSE+F VGL+TGD TI A CL+MTTEILR+MLYRG+E++
Sbjct: 93 IKALSNQKFREFSEKFDSVGLMTGDTTIKADADCLVMTTEILRSMLYRGTEML 145
>UniRef50_Q6BY98 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1243
Score = 149 bits (362), Expect = 6e-35
Identities = 90/220 (40%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Frame = +3
Query: 129 DETPITEAAIQLPNVKNVEKPKLEELTAAGNK--RAHDDIQYADTSVSKKPREEEEDSEL 302
D T + + + L K + + EE T + + + S ++ P E E+ +
Sbjct: 187 DSTVLDDNIVNLEQSKEPQDSQPEESTLEDKNFIESSNLLDQGSKSDNRLPFESEDIDGI 246
Query: 303 ITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQE-YAPLLPLTTEPVKQYSFILDPFQK 479
I + QS + E + H V + E + ++P +++ F LD FQ+
Sbjct: 247 IPLDYASMKQS--MDEAPEHKKSWAHVVDLDHKLENFKEVIP---NMAREWPFELDTFQQ 301
Query: 480 EAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEE 659
EA+ ++ SV V+AHTSAGKTVVAEYAIA++ +N + IYT+PIKALSNQK+R+F E
Sbjct: 302 EAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMATRNMTKAIYTSPIKALSNQKFRDFKET 361
Query: 660 FH--DVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
F DVGLITGDV INP A+CLIMTTEILR+MLYRG++++
Sbjct: 362 FKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLI 401
>UniRef50_A2FBA2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 965
Score = 149 bits (361), Expect = 8e-35
Identities = 82/160 (51%), Positives = 103/160 (64%), Gaps = 6/160 (3%)
Frame = +3
Query: 294 SELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPF 473
S I D+ Q+ V +E + H A+P + EP +Y F D F
Sbjct: 3 SSAIEDLIPKAPQASTVKFEIEG-DNVLHFAALPDGTHTLEDVKFPEEPYLKYDFEFDEF 61
Query: 474 QKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFS 653
QK AI C+ N +SVLVSAHTSAGKTV+A+YAI +L+N RV+YT+PIKALSNQKY+E +
Sbjct: 62 QKCAIACVHNKESVLVSAHTSAGKTVIAKYAIVSALQNNSRVVYTSPIKALSNQKYKELA 121
Query: 654 EEFHD------VGLITGDVTINPSASCLIMTTEILRNMLY 755
+EF VGL+TGDVTINPSAS L+MTTEILR ML+
Sbjct: 122 DEFEPRFGKGCVGLLTGDVTINPSASVLVMTTEILRMMLF 161
>UniRef50_Q4PHM0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1301
Score = 149 bits (361), Expect = 8e-35
Identities = 75/130 (57%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
Frame = +3
Query: 390 IPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI 569
I NQ+ + L + + F LD FQKEA+ ++ SV V+AHTSAGKTVVAEYAI
Sbjct: 310 IDVNQQLSNFHELVPQMAHSFPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAI 369
Query: 570 ALSLKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILR 743
AL+ K+ R IYT+PIKALSNQKYR+F + F +VG++TGDV INP A CLIMTTEILR
Sbjct: 370 ALAQKHMTRCIYTSPIKALSNQKYRDFKQTFGAANVGILTGDVQINPEAPCLIMTTEILR 429
Query: 744 NMLYRGSEIM 773
+MLYRG++++
Sbjct: 430 SMLYRGADLI 439
>UniRef50_A4RR89 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1175
Score = 147 bits (357), Expect = 2e-34
Identities = 70/113 (61%), Positives = 92/113 (81%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
EP + F LD FQKEAI+ ++ ++V V+AHTSAGKTVVAEYA AL+ K+ R IYT+P
Sbjct: 206 EPAHDFPFELDLFQKEAIVHLEKSENVFVAAHTSAGKTVVAEYAFALATKHCTRAIYTSP 265
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IK +SNQK+R+F + F DVGL+TGDV+I P A+CLIMTTEILR+MLYRG++++
Sbjct: 266 IKTISNQKFRDFGKMF-DVGLLTGDVSIKPEAACLIMTTEILRSMLYRGADLI 317
>UniRef50_UPI00015B48BB Cluster: PREDICTED: similar to GA10159-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA10159-PA - Nasonia vitripennis
Length = 1202
Score = 147 bits (355), Expect = 4e-34
Identities = 72/131 (54%), Positives = 99/131 (75%)
Frame = +3
Query: 381 EVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAE 560
++ IP N ++ +P +P + + LD FQK+AIL ++ V V+AHTSAGKT +AE
Sbjct: 269 DIMIPVN-DFDKKIP---DPAMTFPYELDTFQKQAILKLEEQCDVFVAAHTSAGKTTIAE 324
Query: 561 YAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEIL 740
YAIA+S K+ R IYT+PIKALSNQK+REF E+F +VGLITGD+ I P+A+CLIMTTEIL
Sbjct: 325 YAIAMSQKHMTRTIYTSPIKALSNQKFREFKEKFENVGLITGDLQIEPTATCLIMTTEIL 384
Query: 741 RNMLYRGSEIM 773
++MLY +E++
Sbjct: 385 QSMLYCAAEVI 395
>UniRef50_Q5KBF6 Cluster: Translation repressor, putative; n=2;
Filobasidiella neoformans|Rep: Translation repressor,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1185
Score = 144 bits (349), Expect = 2e-33
Identities = 73/127 (57%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
Frame = +3
Query: 399 NQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALS 578
NQ+ L E K Y F LD FQKEA+ ++ SV V+AHTSAGKTVVAEYAIAL+
Sbjct: 280 NQKLENFNELVPEMAKDYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAEYAIALA 339
Query: 579 LKNKQRVIYTTPIKALSNQKYREFSEEFH--DVGLITGDVTINPSASCLIMTTEILRNML 752
K+ + IYT+PIKALSNQK+R+F F VG++TGDV IN SCLIMTTEILR+ML
Sbjct: 340 AKHMTKTIYTSPIKALSNQKFRDFKTTFEPSTVGILTGDVQINAEGSCLIMTTEILRSML 399
Query: 753 YRGSEIM 773
Y+G++++
Sbjct: 400 YKGADLI 406
>UniRef50_A7F1I6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1253
Score = 144 bits (349), Expect = 2e-33
Identities = 83/194 (42%), Positives = 116/194 (59%), Gaps = 2/194 (1%)
Frame = +3
Query: 168 NVKNV-EKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLLQSRIV 344
+VKNV E+ EE++ G A D + S +EE+D + + + L+
Sbjct: 211 DVKNVLEEEPAEEVSTNGADGAMKD----EASSESSDDDEEDDIDSMLPVEFPALEPHGA 266
Query: 345 IHTLETHEGCTHEV-AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLV 521
+ T T G + ++ L + + + F LD FQKEA+ +++ SV V
Sbjct: 267 LATSSTKRGGREWAHMVDVKRDIPNFRELVPDMARDWPFELDTFQKEAVYHLESGDSVFV 326
Query: 522 SAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTIN 701
+AHTSAGKTVVAEYAIAL+ K+ + IYT+PIKALSNQK+R+F + F +VG++TGDV IN
Sbjct: 327 AAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDFRQVFDEVGILTGDVQIN 386
Query: 702 PSASCLIMTTEILR 743
ASCLIMTTEILR
Sbjct: 387 AEASCLIMTTEILR 400
>UniRef50_UPI0000DB702F Cluster: PREDICTED: similar to twister
CG10210-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to twister CG10210-PA - Apis mellifera
Length = 1212
Score = 143 bits (347), Expect = 4e-33
Identities = 70/113 (61%), Positives = 89/113 (78%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
E + + LD FQK+AIL ++ +V V+AHTSAGKT VAEYAIALS K+ +VIYT+P
Sbjct: 265 ELAMSFPYELDIFQKQAILKLEEGCNVFVAAHTSAGKTTVAEYAIALSQKHMTKVIYTSP 324
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IKALSNQKYRE +F VGL+TGD+ INP+ASCLI+TTEIL++MLY SE++
Sbjct: 325 IKALSNQKYRELKRKFESVGLLTGDLQINPNASCLIITTEILQSMLYCASEVL 377
>UniRef50_A7NYL9 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=2; Magnoliophyta|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1010
Score = 143 bits (347), Expect = 4e-33
Identities = 70/116 (60%), Positives = 89/116 (76%)
Frame = +3
Query: 426 LTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIY 605
L + + F LD FQKEAI ++ SV V+AHTSAGKTVVAEYA AL+ K+ R +Y
Sbjct: 27 LVPDMALDFPFELDTFQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVY 86
Query: 606 TTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
T PIK +SNQKYR+F +F DVGL+TGDV++ P ASCLIMTTEILR+MLY+G++I+
Sbjct: 87 TAPIKTISNQKYRDFCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYKGADII 141
>UniRef50_A7ATD0 Cluster: Helicase with zinc finger motif protein,
putative; n=3; Piroplasmida|Rep: Helicase with zinc
finger motif protein, putative - Babesia bovis
Length = 1113
Score = 141 bits (342), Expect = 2e-32
Identities = 69/119 (57%), Positives = 91/119 (76%), Gaps = 2/119 (1%)
Frame = +3
Query: 423 PLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVI 602
P + V +Y F LD FQK AI + ++ V V+AHTS+GKTVVAEYAIAL+L ++ +
Sbjct: 196 PELEDLVIEYPFELDDFQKRAIYHLHKMKHVFVAAHTSSGKTVVAEYAIALALSRGKKAV 255
Query: 603 YTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
YT+PIKALSNQK+REF++ + VG+ITGDV+ NP+A CLI+TTEILRN+LYRG I+
Sbjct: 256 YTSPIKALSNQKFREFTKRYGNETVGIITGDVSCNPNAPCLIVTTEILRNLLYRGDPII 314
>UniRef50_A2DIP0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 1069
Score = 141 bits (341), Expect = 2e-32
Identities = 66/113 (58%), Positives = 91/113 (80%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
+P +++F D FQ ++ ++ Q V VSA TSAGKTVVA+YAIAL+ ++K R IYT+P
Sbjct: 198 KPAYEFNFKCDNFQVRSMYRLEKNQMVFVSAPTSAGKTVVAQYAIALARQHKMRAIYTSP 257
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IKALSNQKYR+ ++ FHDVG++TGDV++N AS LIMTTEILR+MLYRG++++
Sbjct: 258 IKALSNQKYRDLNKVFHDVGILTGDVSLNRDASVLIMTTEILRSMLYRGADLL 310
>UniRef50_Q7RIW3 Cluster: Antiviral protein ski2; n=6; Plasmodium
(Vinckeia)|Rep: Antiviral protein ski2 - Plasmodium
yoelii yoelii
Length = 1358
Score = 139 bits (337), Expect = 6e-32
Identities = 66/108 (61%), Positives = 86/108 (79%)
Frame = +3
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALS 629
Y+F LD FQK ++ I+N + V V+AHTSAGKT++AE+AIALS+K ++ IYT+PIKALS
Sbjct: 301 YNFELDDFQKRSVKHINNFKHVFVAAHTSAGKTLIAEHAIALSIKLNKKAIYTSPIKALS 360
Query: 630 NQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
NQKY EF F +VG+ITGDV +N +A+CLIMTTEILRN+LY I+
Sbjct: 361 NQKYYEFKNIFKNVGIITGDVKMNVNANCLIMTTEILRNLLYLNDNII 408
>UniRef50_Q8SS19 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Encephalitozoon cuniculi|Rep: ATP-DEPENDENT RNA HELICASE
- Encephalitozoon cuniculi
Length = 881
Score = 139 bits (337), Expect = 6e-32
Identities = 63/113 (55%), Positives = 85/113 (75%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
E + F D FQ++A + SV VSAHTS+GKT+VAEYAI+LS + R IYT+P
Sbjct: 56 EKILNIGFEPDTFQRQAFYLLSRASSVFVSAHTSSGKTLVAEYAISLSQIHGTRTIYTSP 115
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IKALSNQKY +F +++ DVG+ITGDV +NP+A CL+MTTEILRN++YR +++
Sbjct: 116 IKALSNQKYHDFKQKYDDVGIITGDVQVNPAAKCLVMTTEILRNLVYRNGDLL 168
>UniRef50_A2FMN7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 1066
Score = 138 bits (334), Expect = 1e-31
Identities = 66/129 (51%), Positives = 93/129 (72%)
Frame = +3
Query: 387 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 566
AI + ++ P + F LDPFQ ++ ++ Q+V V+A TSAGKT VA+YA
Sbjct: 189 AIKDDWDHKKFATEVPNPSLTFPFPLDPFQIRSMYRLEQGQTVFVAAPTSAGKTTVAQYA 248
Query: 567 IALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRN 746
IAL+ +K + +YT+PIKALSNQK+R+ ++F DVG++TGDV+IN ASCLIMTTEILR+
Sbjct: 249 IALARSHKMKTLYTSPIKALSNQKFRDLQKQFDDVGILTGDVSINRDASCLIMTTEILRS 308
Query: 747 MLYRGSEIM 773
MLY G++I+
Sbjct: 309 MLYHGADIL 317
>UniRef50_A5K6G8 Cluster: DEAD/DEAH box helicase, putative; n=2;
Plasmodium|Rep: DEAD/DEAH box helicase, putative -
Plasmodium vivax
Length = 1393
Score = 136 bits (328), Expect = 8e-31
Identities = 63/108 (58%), Positives = 83/108 (76%)
Frame = +3
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALS 629
Y F LD FQK +I ++N + V V+AHTSAGKT++AE+AIA+S+K ++ IYT+PIKALS
Sbjct: 306 YDFELDDFQKRSIKHLNNFKHVFVAAHTSAGKTLIAEHAIAMSIKLNKKAIYTSPIKALS 365
Query: 630 NQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
NQKY EF F VG+ITGD+ +N A+C+IMTTEILRN+LY I+
Sbjct: 366 NQKYHEFKNLFKSVGIITGDIKMNVHANCIIMTTEILRNLLYINDNII 413
>UniRef50_Q5CPF4 Cluster: MRNA translation inhibitor SKI2 SFII
helicase, DEXDc+HELICc; n=2; Cryptosporidium|Rep: MRNA
translation inhibitor SKI2 SFII helicase, DEXDc+HELICc -
Cryptosporidium parvum Iowa II
Length = 1439
Score = 131 bits (317), Expect = 2e-29
Identities = 69/118 (58%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Frame = +3
Query: 441 VKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIK 620
V +Y + LD FQK A++ I N VLV+AHTSAGKT VAEYAI L+ KN ++ IYT+PIK
Sbjct: 121 VLKYPYELDDFQKRAVINIHNGDHVLVAAHTSAGKTAVAEYAIELANKNGRKAIYTSPIK 180
Query: 621 ALSNQKYREFSEEFHD------------VGLITGDVTINPSASCLIMTTEILRNMLYR 758
ALS+QKYREF F + +G+ITGDV+INP A C+IMTTEILR MLYR
Sbjct: 181 ALSSQKYREFLNRFREYPAHSSFTQRNRIGIITGDVSINPDAQCVIMTTEILRTMLYR 238
>UniRef50_Q7QP10 Cluster: GLP_83_12455_16540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_83_12455_16540 - Giardia lamblia
ATCC 50803
Length = 1361
Score = 130 bits (314), Expect = 4e-29
Identities = 69/135 (51%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
Frame = +3
Query: 378 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 557
+E+ P + P PVK + + LDPFQ+ AI + SVLV+AHTSAGKT VA
Sbjct: 74 YEIPRDPANKIYTCEPPAELPVK-FPYELDPFQRRAIGALHIGHSVLVAAHTSAGKTTVA 132
Query: 558 EYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFH---DVGLITGDVTINPSASCLIMT 728
EY IA +L QRV+YTTPIKALSNQKY++ + VG++TGD T+N +A L+MT
Sbjct: 133 EYIIATALAQNQRVVYTTPIKALSNQKYQDLKLAAYTKGSVGIMTGDTTLNRTAGVLVMT 192
Query: 729 TEILRNMLYRGSEIM 773
TEILRNML++G+E++
Sbjct: 193 TEILRNMLHQGAELL 207
>UniRef50_Q4SQA0 Cluster: Chromosome 4 SCAF14533, whole genome
shotgun sequence; n=2; Eukaryota|Rep: Chromosome 4
SCAF14533, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1262
Score = 128 bits (308), Expect = 2e-28
Identities = 59/74 (79%), Positives = 70/74 (94%)
Frame = +3
Query: 552 VAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTT 731
+++YAIAL+L+ KQRVI+T+PIKALSNQKYRE EEF DVGL+TGDVTINP+ASCL+MTT
Sbjct: 192 LSKYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTT 251
Query: 732 EILRNMLYRGSEIM 773
EILR+MLYRGSEIM
Sbjct: 252 EILRSMLYRGSEIM 265
Score = 107 bits (256), Expect = 4e-22
Identities = 57/123 (46%), Positives = 78/123 (63%)
Frame = +3
Query: 309 DINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAI 488
++N+ L ++ + +ET EGCTHEVA+P + +Y PL P + K+Y FILDPFQ++ I
Sbjct: 76 EVNLAELMPQVKVEPVETVEGCTHEVALPVSDQYKPLKPRVGKAAKEYPFILDPFQQDDI 135
Query: 489 LCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHD 668
L IDN VL +AHTSAGKT + VI+T+PI ALS +KY E +EF D
Sbjct: 136 LRIDNNDPVLGTAHTSAGKTA-----------ETKDVIFTSPIIALSIRKYMEMYDEFLD 184
Query: 669 VGL 677
VG+
Sbjct: 185 VGM 187
>UniRef50_Q6AFV9 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
Leifsonia xyli subsp. xyli
Length = 811
Score = 125 bits (301), Expect = 1e-27
Identities = 61/120 (50%), Positives = 86/120 (71%), Gaps = 3/120 (2%)
Frame = +3
Query: 423 PLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN-KQRV 599
PL + F LDPFQ+EA C++N +SVLV+A T AGKT+VAE+A+ L+++ +V
Sbjct: 23 PLLETFLTGLGFDLDPFQREACTCLENGRSVLVAAPTGAGKTIVAEFAVFLAMRQANAKV 82
Query: 600 IYTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
YTTP+KALSNQK++EF + + VGL+TGD IN A ++MTTE+LRNMLY S+++
Sbjct: 83 FYTTPMKALSNQKFQEFQDTYGPESVGLLTGDTNINSHARIVVMTTEVLRNMLYADSDLL 142
>UniRef50_Q3AZ82 Cluster: DEAD/DEAH box helicase-like; n=31;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 926
Score = 121 bits (292), Expect = 2e-26
Identities = 61/109 (55%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
+P + ++F LD FQ EAI ++ SV+VSA T +GKT+V EYAI +L + Q+V YTTP
Sbjct: 23 DPSQCFAFPLDDFQLEAIDALNQGHSVVVSAPTGSGKTLVGEYAIYRALAHGQKVFYTTP 82
Query: 615 IKALSNQKYREFSEEFHD--VGLITGDVTINPSASCLIMTTEILRNMLY 755
+KALSNQK R+F E+F D VGL+TGD+++N AS ++MTTEI RNMLY
Sbjct: 83 LKALSNQKLRDFREQFGDENVGLLTGDLSVNREASIVVMTTEIFRNMLY 131
>UniRef50_A0LU68 Cluster: DSH domain protein; n=2;
Actinomycetales|Rep: DSH domain protein - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 906
Score = 120 bits (289), Expect = 4e-26
Identities = 70/139 (50%), Positives = 85/139 (61%), Gaps = 8/139 (5%)
Frame = +3
Query: 381 EVAIP-PNQEYAPL-----LPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAG 542
E+ P P Q YA P TE Y F LDPFQ EA ++ +SVLV+A T AG
Sbjct: 5 EITSPSPAQRYAAARRRAATPRFTEFAAGYDFPLDPFQVEACRALEEGKSVLVAAPTGAG 64
Query: 543 KTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASC 716
KTVV E+A+ L+L + YTTPIKALSNQKY +F VGL+TGD TIN A
Sbjct: 65 KTVVGEFAVHLALAGGVKCFYTTPIKALSNQKYLDFVRRHGPDRVGLLTGDNTINGEAPI 124
Query: 717 LIMTTEILRNMLYRGSEIM 773
++MTTE+LRNMLY GS +
Sbjct: 125 IVMTTEVLRNMLYAGSSTL 143
>UniRef50_Q8DLX6 Cluster: Tlr0350 protein; n=2; Bacteria|Rep:
Tlr0350 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 889
Score = 119 bits (286), Expect = 9e-26
Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Frame = +3
Query: 423 PLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVI 602
P + + Q F LD FQ AI +D +SV+V A T +GKT++ EYAI +L +QRV
Sbjct: 6 PALADFLAQLPFELDAFQAAAIAALDAGRSVVVCAPTGSGKTLIGEYAIHRALTRQQRVF 65
Query: 603 YTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLY 755
YTTP+KALSNQK+R+F ++F VGL+TGD++IN A L+MTTEI RNMLY
Sbjct: 66 YTTPLKALSNQKWRDFQQQFGAAQVGLLTGDISINRDAPILVMTTEIFRNMLY 118
>UniRef50_A0JWZ5 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 964
Score = 116 bits (280), Expect = 5e-25
Identities = 57/113 (50%), Positives = 80/113 (70%), Gaps = 2/113 (1%)
Frame = +3
Query: 441 VKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIK 620
V+ F LD FQ++A L + + VLV+A T AGKT+V E+AI L+L+ + YTTPIK
Sbjct: 32 VRTLDFELDDFQRQACLSLQQGRGVLVAAPTGAGKTIVGEFAIYLALQRALKAFYTTPIK 91
Query: 621 ALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
ALSNQKY E ++++ +VGL+TGD +IN A ++MTTE+LRNMLY S+ +
Sbjct: 92 ALSNQKYSELADKYGPENVGLLTGDTSINGDAPVVVMTTEVLRNMLYADSDTL 144
>UniRef50_A0YS39 Cluster: Antiviral protein; n=1; Lyngbya sp. PCC
8106|Rep: Antiviral protein - Lyngbya sp. PCC 8106
Length = 1026
Score = 115 bits (276), Expect = 2e-24
Identities = 57/106 (53%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
Frame = +3
Query: 444 KQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKA 623
K + F LDPFQ++AI + +SV+V A T +GKT++ EYAI +L +RV YTTP+KA
Sbjct: 15 KLFPFQLDPFQQDAIDALKAGKSVVVCAPTGSGKTLIGEYAIYHALSRGRRVFYTTPLKA 74
Query: 624 LSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLY 755
LSNQK R+F E F +VGL+TGD+++N A+ ++MTTEI RNMLY
Sbjct: 75 LSNQKLRDFQERFGVENVGLLTGDLSMNREAAVVVMTTEIFRNMLY 120
>UniRef50_Q2JRI9 Cluster: ATP-dependent helicase, DEAD/DEAH box
family; n=2; Synechococcus|Rep: ATP-dependent helicase,
DEAD/DEAH box family - Synechococcus sp. (strain
JA-3-3Ab) (Cyanobacteria bacteriumYellowstone A-Prime)
Length = 803
Score = 114 bits (275), Expect = 2e-24
Identities = 60/121 (49%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Frame = +3
Query: 399 NQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALS 578
N +P L E + + F LD FQ AI + +SV+V A T +GKT++ EYAI +
Sbjct: 2 NPLLSPATDLLDELRRLFPFELDEFQIRAIQALAAGESVVVCAPTGSGKTLIGEYAIYRA 61
Query: 579 LKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNML 752
L +RV YTTP+KALSNQK+R+F ++F VGL+TGD++IN A L+MTTEI RNML
Sbjct: 62 LSQGKRVFYTTPLKALSNQKFRDFGQQFGPERVGLLTGDISINREAPILVMTTEIFRNML 121
Query: 753 Y 755
Y
Sbjct: 122 Y 122
>UniRef50_P74686 Cluster: Antiviral protein; n=3; Chroococcales|Rep:
Antiviral protein - Synechocystis sp. (strain PCC 6803)
Length = 1006
Score = 113 bits (273), Expect = 3e-24
Identities = 61/115 (53%), Positives = 75/115 (65%), Gaps = 9/115 (7%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPI 617
P ++F LD FQ+EAI +D QSV+V A T +GKTVV EYAI ++ +RV YTTP+
Sbjct: 9 PADLFAFPLDDFQQEAIAALDQDQSVVVCAPTGSGKTVVGEYAIYRAIARGKRVFYTTPL 68
Query: 618 KALSNQKYREFSEEFHD---------VGLITGDVTINPSASCLIMTTEILRNMLY 755
KALSNQK R+F E+ VGLITGD IN A ++MTTEI RNMLY
Sbjct: 69 KALSNQKIRDFQEKLEKLGLENAAQLVGLITGDTVINADAPVVVMTTEIFRNMLY 123
>UniRef50_O04538 Cluster: F20P5.20 protein; n=2; core
eudicotyledons|Rep: F20P5.20 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1198
Score = 113 bits (273), Expect = 3e-24
Identities = 61/112 (54%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
E + Y F +D FQ+ AI SV+VSA TS+GKT++AE A ++ +R+ YTTP
Sbjct: 146 ELISIYDFRIDKFQRLAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTP 205
Query: 615 IKALSNQKYREFSEEFHD--VGLITGDVTINPSASCLIMTTEILRNMLYRGS 764
+KALSNQK+REF E F D VGL+TGD IN A +IMTTEILRNMLY+ S
Sbjct: 206 LKALSNQKFREFRETFGDDNVGLLTGDSAINKDAQIVIMTTEILRNMLYQRS 257
>UniRef50_Q94EZ6 Cluster: Similar to Synechocystis antiviral
protein; n=3; Magnoliophyta|Rep: Similar to
Synechocystis antiviral protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 916
Score = 112 bits (270), Expect = 8e-24
Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
E + Y F +D FQ+ AI SV+VSA TS+GKT++AE A ++ +R+ YTTP
Sbjct: 146 ELISIYDFRIDKFQRLAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTP 205
Query: 615 IKALSNQKYREFSEEFHD--VGLITGDVTINPSASCLIMTTEILRNMLYR 758
+KALSNQK+REF E F D VGL+TGD IN A +IMTTEILRNMLY+
Sbjct: 206 LKALSNQKFREFRETFGDDNVGLLTGDSDINKDAQIVIMTTEILRNMLYQ 255
>UniRef50_Q4JVQ3 Cluster: Putative helicase; n=1; Corynebacterium
jeikeium K411|Rep: Putative helicase - Corynebacterium
jeikeium (strain K411)
Length = 890
Score = 112 bits (269), Expect = 1e-23
Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +3
Query: 447 QYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 626
QY F LD FQ +A ID + VLV+A T AGKT+V E+A+ + YTTPIKAL
Sbjct: 14 QYDFPLDDFQIQAAEAIDRGKGVLVAAPTGAGKTIVGEFAVFAAFHGDGTCFYTTPIKAL 73
Query: 627 SNQKYREFSEEFHD--VGLITGDVTINPSASCLIMTTEILRNMLYRGSE 767
SNQK+ + E + + VGL+TGDVTIN A ++MTTE+LRNM+Y SE
Sbjct: 74 SNQKFHDLVERYGEANVGLLTGDVTINGDAPIVVMTTEVLRNMIYADSE 122
>UniRef50_UPI00004988E4 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 1062
Score = 110 bits (265), Expect = 3e-23
Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Frame = +3
Query: 444 KQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKA 623
++Y F LD FQK+AI ++ + V V AHTSAGKT AEYAI+++ + IYT+PIKA
Sbjct: 73 RKYDFELDTFQKQAIYHMELGEHVFVIAHTSAGKTATAEYAISIAKSKGMKAIYTSPIKA 132
Query: 624 LSNQKYREFSEEFHDVGLITGDVTINPSASCL-IMTTEILRNMLYRGSEIM 773
LSNQKY +F + F VG++TGDV I + IMTTEILR+ LY+ S+ +
Sbjct: 133 LSNQKYYDFRKIFGKVGIMTGDVVIQGEDDLVTIMTTEILRSKLYQDSKFI 183
>UniRef50_Q84561 Cluster: A241R protein; n=5; Chlorovirus|Rep: A241R
protein - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 725
Score = 110 bits (264), Expect = 4e-23
Identities = 57/101 (56%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Frame = +3
Query: 462 LDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKY 641
LD FQK+AI +DN SV V+AHTS+GKT++AEYA +S + VIYT P+KA+SNQKY
Sbjct: 11 LDVFQKDAIKSMDNDHSVFVAAHTSSGKTIIAEYAYHIS--DGTNVIYTAPLKAISNQKY 68
Query: 642 REFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYR 758
++FS +F +VG+ITGDV N +A LIMTTEI R M+ +
Sbjct: 69 KDFSSKFGADNVGIITGDVVKNETAKLLIMTTEIFRIMVIK 109
>UniRef50_A7BCC7 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 922
Score = 108 bits (260), Expect = 1e-22
Identities = 53/112 (47%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
Frame = +3
Query: 441 VKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIK 620
V SF DPFQ +A+ ++ SVLV+A T AGKT+V ++ ++L+ R YTTPIK
Sbjct: 52 VSSLSFTPDPFQIQALDAVEAGSSVLVAAPTGAGKTIVGQFGAYVALEQGMRAFYTTPIK 111
Query: 621 ALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
ALSNQKY E + + +VGL TGD ++N A ++MTTE+LRNM+Y G+ +
Sbjct: 112 ALSNQKYLELCDLYGADNVGLATGDTSVNSGAPVVVMTTEVLRNMIYAGASL 163
>UniRef50_Q47P19 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=2; Actinomycetales|Rep:
Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
- Thermobifida fusca (strain YX)
Length = 947
Score = 107 bits (258), Expect = 2e-22
Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = +3
Query: 423 PLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVI 602
P E Y F D FQ A ++ VLV+A T +GKTVV E+A+ L+L++ ++
Sbjct: 20 PTIEEFQNLYGFDFDDFQIRACKALETGHGVLVAAPTGSGKTVVGEFAVHLALRDGRKCF 79
Query: 603 YTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYRGS 764
YTTPIKALSNQKY + + VGL+TGD +IN A ++MTTE+LRNMLY GS
Sbjct: 80 YTTPIKALSNQKYTDLVRRYGSDKVGLLTGDNSINGEAPVVVMTTEVLRNMLYAGS 135
>UniRef50_Q2J9S5 Cluster: DSH-like; n=3; Bacteria|Rep: DSH-like -
Frankia sp. (strain CcI3)
Length = 1026
Score = 107 bits (258), Expect = 2e-22
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
F LDPFQ EA+ + + VLV+A T AGKTVV E+A L+L+ R YTTPIKALSNQ
Sbjct: 17 FGLDPFQFEAVAALAAGEGVLVAAPTGAGKTVVGEFAAHLALRTGTRCFYTTPIKALSNQ 76
Query: 636 KYREFSEEFH--DVGLITGDVTINPSASCLIMTTEILRNMLYRG 761
KY + + VGL+TGD + N A ++MTTE+LRNMLY G
Sbjct: 77 KYADLVSRYGAVSVGLLTGDTSRNGDAPIVVMTTEVLRNMLYAG 120
>UniRef50_Q8NQE6 Cluster: Superfamily II DNA and RNA helicases; n=4;
Corynebacterium|Rep: Superfamily II DNA and RNA
helicases - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 929
Score = 106 bits (255), Expect = 5e-22
Identities = 54/113 (47%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +3
Query: 432 TEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTT 611
+E + F LD FQ + ++ VLV A T AGKT+V E+A++L+L + YTT
Sbjct: 12 SEFIADLGFDLDEFQIKGCHAVEEDHGVLVCAPTGAGKTIVGEFAVSLALSRGTKCFYTT 71
Query: 612 PIKALSNQKYREFSEEFHD--VGLITGDVTINPSASCLIMTTEILRNMLYRGS 764
PIKALSNQKY + + VGL+TGDV+IN A ++MTTE+LRNM+Y GS
Sbjct: 72 PIKALSNQKYHDLVAKHGSDAVGLLTGDVSINHDADIVVMTTEVLRNMIYAGS 124
>UniRef50_Q8G6A5 Cluster: Probable helicase; n=4;
Bifidobacterium|Rep: Probable helicase - Bifidobacterium
longum
Length = 863
Score = 106 bits (255), Expect = 5e-22
Identities = 61/143 (42%), Positives = 83/143 (58%), Gaps = 9/143 (6%)
Frame = +3
Query: 363 HEGCTHEVAIPPNQEYAPLLPLTTEPV-------KQYSFILDPFQKEAILCIDNLQSVLV 521
H+G + P+Q YA + + F LD FQ EA ++ +VLV
Sbjct: 7 HKGNADSQTLSPSQRYASFQKVQRHRASAAARFAESLPFELDDFQTEANDALEAGSNVLV 66
Query: 522 SAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLITGDVT 695
+A T AGKTVVA++AI L+ + + YTTPIKALSNQKY + + + VGL+TGD +
Sbjct: 67 AAPTGAGKTVVADFAIYLAQERNVKAFYTTPIKALSNQKYHDLVDVYGPDKVGLLTGDTS 126
Query: 696 INPSASCLIMTTEILRNMLYRGS 764
IN A ++MTTE+LRNMLY S
Sbjct: 127 INSEADIVVMTTEVLRNMLYERS 149
>UniRef50_Q9SEA2 Cluster: Putative helicase-like protein; n=1;
Guillardia theta|Rep: Putative helicase-like protein -
Guillardia theta (Cryptomonas phi)
Length = 719
Score = 106 bits (255), Expect = 5e-22
Identities = 54/109 (49%), Positives = 76/109 (69%), Gaps = 3/109 (2%)
Frame = +3
Query: 447 QYSFILDPFQKEAILCIDNLQ---SVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPI 617
+Y+F LD FQ ++C++ + + V+AHTS+GKT+V E I +LK +RVIY +PI
Sbjct: 51 KYNFKLDNFQ---LICLNLMYFNVDIFVAAHTSSGKTLVGEQVIFSTLKLNKRVIYLSPI 107
Query: 618 KALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGS 764
KALSNQK+ +F F++VG+ITGD INP A+C+IMTTEI R + S
Sbjct: 108 KALSNQKFEDFKNIFYNVGIITGDQIINPDANCVIMTTEIFRLYILNNS 156
>UniRef50_Q6A7Y7 Cluster: Superfamily II RNA helicase; n=1;
Propionibacterium acnes|Rep: Superfamily II RNA helicase
- Propionibacterium acnes
Length = 917
Score = 106 bits (254), Expect = 7e-22
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +3
Query: 453 SFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSN 632
SF D +Q +A +D+ VLV+A T AGKTVV EYA L+L + + YTTPIKALSN
Sbjct: 13 SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72
Query: 633 QKYREFSEEFHD--VGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
QK+ + + VGL+TGDVTIN A ++MTTE+LRNM+YR S +
Sbjct: 73 QKFHDLVTRHGEDQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTL 121
>UniRef50_Q193B9 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 762
Score = 105 bits (253), Expect = 9e-22
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Frame = +3
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALS 629
+ +LD FQ+EA+ ID QSV+V+A T GKT+VA+Y + + +R+IYT PIKALS
Sbjct: 19 HGLVLDRFQEEALDAIDEGQSVIVAAPTGTGKTLVADYLVEKVMAEGRRIIYTAPIKALS 78
Query: 630 NQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNML 752
NQK++++ + F VG++TGDV +N A LIMTTEI RN +
Sbjct: 79 NQKFKDYKQLFGVDQVGILTGDVVLNSEAPLLIMTTEIFRNQV 121
>UniRef50_A4S392 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 1055
Score = 105 bits (252), Expect = 1e-21
Identities = 60/114 (52%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Frame = +3
Query: 423 PLTTEPVKQ-YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRV 599
P+ ++Q Y + LD FQ EA + SV+VSA T +GKT+V E AI +L ++
Sbjct: 90 PVNVHDIEQFYPYELDGFQVEATELLLRGSSVVVSAPTGSGKTLVGETAILTALARGEKA 149
Query: 600 IYTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLY 755
IYTTP+KALSNQK REF + F GL TGDV IN A +IMTTEILRNMLY
Sbjct: 150 IYTTPLKALSNQKLREFQKIFGKRRCGLKTGDVDINGDADVMIMTTEILRNMLY 203
>UniRef50_UPI000050F6D4 Cluster: COG4581: Superfamily II RNA
helicase; n=1; Brevibacterium linens BL2|Rep: COG4581:
Superfamily II RNA helicase - Brevibacterium linens BL2
Length = 907
Score = 103 bits (246), Expect = 7e-21
Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
F LD FQ EA + + + VLV+A T AGKT++AE+A+ L+ +RV YTTPIKALSNQ
Sbjct: 46 FELDDFQLEACAQLQDGKDVLVTAPTGAGKTLIAEFAVELARDEGKRVFYTTPIKALSNQ 105
Query: 636 KYREFSE--EFHDVGLITGDVTINPSASCLIMTTEILRNMLY 755
K+ + + +VGL+TGD +I A ++MTTE+LRNMLY
Sbjct: 106 KFNDLMDVHGVENVGLLTGDTSIRRDAPIIVMTTEVLRNMLY 147
>UniRef50_Q010R7 Cluster: DNA polymerase theta/eta, DEAD-box
superfamily; n=1; Ostreococcus tauri|Rep: DNA polymerase
theta/eta, DEAD-box superfamily - Ostreococcus tauri
Length = 1096
Score = 102 bits (244), Expect = 1e-20
Identities = 57/104 (54%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Frame = +3
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALS 629
Y + LD FQ +A + SV+VSA T +GKT+V E AI +L ++ IYTTP+KALS
Sbjct: 82 YPYNLDVFQIDATKVLLKGSSVVVSAPTGSGKTLVGETAILTALARGEKAIYTTPLKALS 141
Query: 630 NQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLY 755
NQK REF + F GL TGDV IN A +IMTTEILRNMLY
Sbjct: 142 NQKLREFQKIFGKRRCGLKTGDVDINGDADVMIMTTEILRNMLY 185
>UniRef50_Q9ZBD8 Cluster: Probable helicase helY; n=24;
Actinomycetales|Rep: Probable helicase helY -
Mycobacterium leprae
Length = 920
Score = 101 bits (242), Expect = 2e-20
Identities = 50/105 (47%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
F LD FQ+ A ++ VLV A T AGKTVV E+A+ L+L + YTTP+KALSNQ
Sbjct: 16 FSLDDFQQRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGGKCFYTTPLKALSNQ 75
Query: 636 KYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYRGS 764
KY + + + + +GL+TGD ++N + ++MTTE+LRNMLY S
Sbjct: 76 KYTDLTARYGRNRIGLLTGDQSVNGDSPVVVMTTEVLRNMLYADS 120
>UniRef50_A5D0M7 Cluster: Putative uncharacterized protein; n=1;
Pelotomaculum thermopropionicum SI|Rep: Putative
uncharacterized protein - Pelotomaculum
thermopropionicum SI
Length = 253
Score = 100 bits (239), Expect = 5e-20
Identities = 55/107 (51%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Frame = +3
Query: 432 TEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTT 611
T P ILD FQ +AI + SVLVSA T GKT+VAE + + ++YT+
Sbjct: 25 TPPPDTGRLILDDFQNKAIEALRKGYSVLVSAPTGNGKTLVAEILAKDLMAAGRGMVYTS 84
Query: 612 PIKALSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRN 746
P+KALSNQK+R+F E F VGL+TGD++INP A LIMTTEI RN
Sbjct: 85 PLKALSNQKFRDFKEIFGEESVGLVTGDISINPGAPMLIMTTEIFRN 131
>UniRef50_A7K9K6 Cluster: Putative uncharacterized protein Z596R;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z596R - Chlorella virus ATCV-1
Length = 707
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/104 (47%), Positives = 67/104 (64%)
Frame = +3
Query: 441 VKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIK 620
+ + LD +QK+AI + SV + T +GKTV+AEYA L K VIYT P+K
Sbjct: 5 INSLGYELDQWQKDAIGSMTKGHSVFAAVPTGSGKTVLAEYAATLGKK----VIYTAPLK 60
Query: 621 ALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNML 752
A+SNQKY +FS++F VG+ITGD+ IN A L+MT E+ R M+
Sbjct: 61 AISNQKYHDFSKKFPSVGIITGDIQINEDADLLVMTQEVFRKMI 104
>UniRef50_A1I9V7 Cluster: ATP-dependent DNA helicase; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep:
ATP-dependent DNA helicase - Candidatus Desulfococcus
oleovorans Hxd3
Length = 709
Score = 83.8 bits (198), Expect = 4e-15
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Frame = +3
Query: 444 KQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKA 623
+Q F DPFQ EA+ + +V+A T AGKT +AE IA K ++ Y +P+KA
Sbjct: 61 EQAPFSPDPFQLEALKAV-RTSDCIVTAPTGAGKTWIAEQVIAAMRKEGKKTWYASPLKA 119
Query: 624 LSNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLY 755
LSN Y FS F + G++TGD NP+A ++ TTEILRN LY
Sbjct: 120 LSNSIYELFSGMFGPENTGILTGDRKENPNAPIIVGTTEILRNQLY 165
>UniRef50_Q2LR62 Cluster: ATP-dependent DNA helicase; n=1;
Syntrophus aciditrophicus SB|Rep: ATP-dependent DNA
helicase - Syntrophus aciditrophicus (strain SB)
Length = 700
Score = 83.0 bits (196), Expect = 7e-15
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
F+ D FQ +A+ I LV A T +GKT +AE AI + R Y +P+KALSN
Sbjct: 66 FVPDEFQLQALEAIKK-NDCLVMAPTGSGKTWIAEQAILSVFRAGGRCWYASPLKALSNA 124
Query: 636 KYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLY 755
K+ EFS+ F VG++TGD NP A ++ TTEILRN LY
Sbjct: 125 KWVEFSQNFGAQHVGILTGDTKENPDAPIIVGTTEILRNQLY 166
>UniRef50_A2E3A0 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 797
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +3
Query: 600 IYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IYT P+K+L+NQKY E E+F VGLITGDV+ NP+A +IMT E+LRN L S ++
Sbjct: 3 IYTAPVKSLANQKYSEICEKFPSVGLITGDVSTNPTADVIIMTAEVLRNHLMSNSSLL 60
>UniRef50_A7CQP4 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 956
Score = 73.3 bits (172), Expect = 6e-12
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Frame = +3
Query: 462 LDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKY 641
L P Q+EAIL + + ++V+++ T +GK++VA SL +R +YT PIKAL N+K+
Sbjct: 77 LYPEQEEAILELFDGKNVILNTPTGSGKSLVAAALHFKSLCAGERSVYTCPIKALVNEKF 136
Query: 642 REFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNM-LYRG 761
+F +VG++TGD ++NP A L T EIL N+ L RG
Sbjct: 137 LSLCRDFGPENVGMMTGDASVNPGAPILCCTAEILANIALARG 179
>UniRef50_A0LNP0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Syntrophobacter fumaroxidans MPOB|Rep: DEAD/DEAH
box helicase domain protein - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 843
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = +3
Query: 513 VLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLITG 686
VLV+A T AGKT +A AI + Y +P+KALSN KY EF +F +VG++TG
Sbjct: 12 VLVTAPTGAGKTYIAVEAIRKVFGRGGKSWYASPLKALSNSKYEEFIADFGASNVGILTG 71
Query: 687 DVTINPSASCLIMTTEILRNMLY 755
D N A ++ TTEILRN LY
Sbjct: 72 DRKENAQAPIIVGTTEILRNQLY 94
>UniRef50_Q7UNW6 Cluster: Putative helicase; n=1; Pirellula sp.|Rep:
Putative helicase - Rhodopirellula baltica
Length = 878
Score = 66.1 bits (154), Expect = 9e-10
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Frame = +3
Query: 513 VLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF-------HDV 671
VLV A T GKT++AE A+ +L+ +R+ YTTP+ AL++QK E E V
Sbjct: 69 VLVCAPTGTGKTLIAEAAVYEALRTGKRMYYTTPLIALTDQKLDELRESAVRWGFSPDQV 128
Query: 672 GLITGDVTINPSASCLIMTTEILRNML 752
GL+TG+ ++NP A L++ EIL N L
Sbjct: 129 GLVTGNRSVNPDAPVLVVVAEILLNRL 155
>UniRef50_A7HG06 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 868
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +3
Query: 462 LDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKY 641
L P Q+EAIL + + + ++++ T +GK++VA + ++ +R YT PIKAL N+K+
Sbjct: 59 LYPHQEEAILQLLDRRHLVLNTPTGSGKSLVATFLHFQAMAEGKRSFYTCPIKALVNEKF 118
Query: 642 REFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYR 758
+ F +VG++TGD +N A + T EIL N+ R
Sbjct: 119 FDLCRLFGPDNVGMMTGDAAVNRDAPIVCCTAEILMNLAVR 159
>UniRef50_Q6A5X1 Cluster: DeaD/DeaH box helicase; n=37;
Actinobacteria (class)|Rep: DeaD/DeaH box helicase -
Propionibacterium acnes
Length = 892
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Frame = +3
Query: 474 QKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFS 653
Q+EAIL I + V+V+ T +GK+++A A + R YT PIKAL ++K+
Sbjct: 89 QEEAILEILSGNHVIVTTPTGSGKSLIATAAHFACVAAGGRSYYTAPIKALVSEKFFSLC 148
Query: 654 EEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYR 758
E F +VG++TGD ++N A + T EIL N+ R
Sbjct: 149 EIFGAANVGMVTGDASVNADAPIICCTAEILANIALR 185
>UniRef50_A7BDZ5 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 916
Score = 61.7 bits (143), Expect = 2e-08
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +3
Query: 462 LDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKY 641
L P Q+EA++ I V+ + T +GK+++A A S+ + R YT P+KAL ++K+
Sbjct: 39 LYPHQEEALVEILAGNHVIAATPTGSGKSMIALAAHFTSMAHGGRSYYTAPLKALVSEKF 98
Query: 642 REFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYR 758
+ F +VG++TGDV++N A + T EIL N R
Sbjct: 99 FDLVSLFGADNVGMVTGDVSLNADAPIICCTAEILANQSLR 139
>UniRef50_A4E809 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Collinsella aerofaciens ATCC 25986
Length = 893
Score = 59.7 bits (138), Expect = 8e-08
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 357 ETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTS 536
E +G E + P+Q + T++ L Q+EA++ + V++ T
Sbjct: 44 EPEDGSEPEPWLTPDQAFERFFEWTSDR----GIELWDHQEEALMDLAAGNHVILGTPTG 99
Query: 537 AGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPSA 710
+GK++VA + + + +R YT PIKAL ++K+ + + +VG+ITGD IN A
Sbjct: 100 SGKSLVALGMLFMGMAQGKRCYYTAPIKALVSEKFFDLVQVLGRDNVGMITGDTHINTKA 159
Query: 711 SCLIMTTEILRNMLYRGSE 767
+ T EIL N R E
Sbjct: 160 PVICCTAEILANDALREGE 178
>UniRef50_A6GDC0 Cluster: DEAD/DEAH box helicase; n=1; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 876
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +3
Query: 447 QYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 626
+ F L Q+EA+L I + V+++ T +GK++VA +L +R YT PIKAL
Sbjct: 39 EQGFELYDHQEEAVLEIMAGRHVILNTPTGSGKSLVALAMHFRALAQGKRAYYTCPIKAL 98
Query: 627 SNQKYREFSEEF--HDVGLITGDVTINPSASCLIMTTEILRNMLYR 758
++K+ + VG++TGD +N A + T E+L N+ R
Sbjct: 99 VSEKFFDLCRVLGPERVGMLTGDAALNHDAPIICCTAEVLANLALR 144
>UniRef50_Q9VF56 Cluster: CG5205-PA; n=5; Endopterygota|Rep: CG5205-PA
- Drosophila melanogaster (Fruit fly)
Length = 2183
Score = 58.0 bits (134), Expect = 2e-07
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 19/132 (14%)
Frame = +3
Query: 393 PPNQEYAPLLPLTTEPVKQ------YSFI-LDPFQKEAILCIDNLQS-VLVSAHTSAGKT 548
PP E PL PL +K Y F +P Q + C+ + + VL+ A T +GKT
Sbjct: 1307 PPLTELLPLRPLPVSCLKNVVYESLYKFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKT 1366
Query: 549 VVAEYAI--ALSLKNKQRVIYTTPIKALSNQKYREFSEEFH--DVGL----ITGDVTINP 704
+VAE AI AL+ K +V+Y P+KAL ++ ++ + F +GL +TGDVT +
Sbjct: 1367 IVAEIAIFRALNQNPKCKVVYIAPLKALVKERIADWEQRFQRSSLGLKVVELTGDVTPDI 1426
Query: 705 SA---SCLIMTT 731
A S LI+TT
Sbjct: 1427 QAIRESQLIVTT 1438
>UniRef50_A1RXH5 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Thermofilum pendens Hrk 5|Rep: DEAD/DEAH box
helicase domain protein - Thermofilum pendens (strain
Hrk 5)
Length = 739
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVG---- 674
+++++SA T++GKT+VAE A L N +V+Y P++AL+++K++EF E F + G
Sbjct: 45 KNIVLSAPTASGKTLVAELAALKHLLNGGKVLYLAPLRALASEKFKEFKEFFGEFGYRSV 104
Query: 675 LITGDV-TINPSAS--CLIMTTEILRNMLYRGS 764
L TGD T +PS +I+TT + L R S
Sbjct: 105 LSTGDYDTADPSLGKYDVIVTTNEKADSLLRHS 137
>UniRef50_Q2UQR0 Cluster: Predicted helicase; n=1; Aspergillus
oryzae|Rep: Predicted helicase - Aspergillus oryzae
Length = 1482
Score = 54.8 bits (126), Expect = 2e-06
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +3
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK--NKQRVIYTTPIKA 623
Y F D +Q+E + ID +S+ V A TSAGKT ++ YAI L+ N+ ++Y P KA
Sbjct: 562 YDFEPDKWQREILDQIDARKSLFVVAPTSAGKTFISFYAIKQILEDDNEGVIVYVAPTKA 621
Query: 624 LSNQKYRE----FSEEFHDVGL-ITGDVTINP 704
L NQ E FS+ F + G I D+T+ P
Sbjct: 622 LVNQIAAEVQARFSKNFKETGKGIPNDLTLEP 653
>UniRef50_A3DL12 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Staphylothermus marinus F1|Rep: DEAD/DEAH box
helicase domain protein - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 716
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 462 LDPFQKEAILC-IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRV-IYTTPIKALSNQ 635
L+P QK A+ + N ++LVSA T++GKT++ E A+ + NK + +Y P++AL+++
Sbjct: 27 LNPVQKSAVKKGLFNSMNLLVSAPTASGKTLIGEMALVHNTINKDMIGLYLVPLRALASE 86
Query: 636 KYREFSEEFHDVGLITGDVT 695
KY EF +E +GL G T
Sbjct: 87 KYDEF-KELEKLGLRIGITT 105
>UniRef50_UPI00015BB23F Cluster: DEAD/DEAH box helicase domain
protein; n=1; Ignicoccus hospitalis KIN4/I|Rep:
DEAD/DEAH box helicase domain protein - Ignicoccus
hospitalis KIN4/I
Length = 698
Score = 54.0 bits (124), Expect = 4e-06
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Frame = +3
Query: 495 IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHD-- 668
+ +++LVSA T +GKT+VAE AI +L N + +Y TP+++L+ +KY + F D
Sbjct: 37 LTEFKNLLVSAPTGSGKTLVAEMAIKNALDNGYKAVYLTPLRSLAFEKYASLKKIFKDSK 96
Query: 669 VGLITGDVTINP--SASCLIMTTEILRNMLYRGS 764
V L GD A L+ T E + ++L S
Sbjct: 97 VALSVGDYHAPEVGEADVLVATYERMDSLLRHNS 130
>UniRef50_Q9P7T8 Cluster: DEAD/DEAH box helicase; n=2; Eukaryota|Rep:
DEAD/DEAH box helicase - Schizosaccharomyces pombe
(Fission yeast)
Length = 1717
Score = 54.0 bits (124), Expect = 4e-06
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTT 611
P + +F D +Q+E + +D +SV V A TS+GKT ++ YA+ L++ VIY
Sbjct: 728 PDSRVAFDPDEWQRETLDILDRDESVFVVAPTSSGKTFISFYAMEKVLRDNDDGVVIYVA 787
Query: 612 PIKALSNQ----KYREFSEEFHDVG-----LITGDVTINPSASCLIMTT--EILRNML 752
P KAL NQ Y F++ + G + T D IN +C ++ T +L++ML
Sbjct: 788 PTKALVNQLSAEVYARFNKHYPHAGQTVWSVYTRDYRINNPTNCQVLITVPHVLQSML 845
>UniRef50_Q2NF44 Cluster: Predicted helicase; n=1; Methanosphaera
stadtmanae DSM 3091|Rep: Predicted helicase -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 834
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
+++L+ + T++GKT+V E A N +++IY TP+ AL+NQKYR+F +++ +GL
Sbjct: 234 ENLLIVSATASGKTLVGELAGIPKALNHKKLIYLTPLVALANQKYRDFKKQYKPLGL 290
>UniRef50_Q7RQI9 Cluster: DEAD/DEAH box helicase, putative; n=6;
Plasmodium (Vinckeia)|Rep: DEAD/DEAH box helicase,
putative - Plasmodium yoelii yoelii
Length = 2237
Score = 53.6 bits (123), Expect = 5e-06
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Frame = +3
Query: 168 NVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLLQSRIVI 347
NVK EK KL+ G + D+ + + KK REE +SE+ I+ +
Sbjct: 1055 NVKGKEKTKLKGGAKGGKSK--DEEKLGLDKIKKKGREES-NSEVGVKISDRKELKELYK 1111
Query: 348 HTLETHEGCTHEVAIPPNQEYA-------PLLPLTTEPVK--QYSFILDPFQKEAILCID 500
+ +E+ + + E+ I ++E+ LL TT +K + F LD +Q + +D
Sbjct: 1112 YKIESVKTYS-ELKIDEDKEHEFQLYYMYYLLDRTTGNIKDKRVLFTLDTWQYNILNLVD 1170
Query: 501 NLQSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQKYREFSEEFH 665
+S+LVS TS+GKT + Y + L L N V+Y P L+ Q + E + F+
Sbjct: 1171 RRKSILVSCPTSSGKTFICYYVMDKVLRLNNDSVVVYVAPNDTLALQVFHEVNGRFN 1227
>UniRef50_Q5UYF9 Cluster: Pre-mRNA splicing helicase; n=6;
Halobacteriaceae|Rep: Pre-mRNA splicing helicase -
Haloarcula marismortui (Halobacterium marismortui)
Length = 823
Score = 52.8 bits (121), Expect = 9e-06
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQK---YREFSEEFHDVGLI 680
+V+VSA T++GKT +AE AI +L ++ P++AL+N+K + F E + V ++
Sbjct: 70 NVVVSAPTASGKTALAELAICKTLAEDGTALFLAPLRALTNEKESEWERFEEMGYSVYVV 129
Query: 681 TGDVTINP----SASCLIMTTE 734
TG+ +NP A L+MT E
Sbjct: 130 TGERDLNPRRAERADILVMTPE 151
>UniRef50_UPI000023EEC7 Cluster: hypothetical protein FG10059.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10059.1 - Gibberella zeae PH-1
Length = 1608
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +3
Query: 432 TEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIY 605
++P + F D +Q++ + CID +SVLV A TSAGKT ++ YA+ L+ ++Y
Sbjct: 673 SQPDARVQFEPDAWQRDVLDCIDANESVLVVAPTSAGKTFISFYAMKKVLEESDDGVLVY 732
Query: 606 TTPIKALSNQKYREFSEEF 662
P KAL NQ E F
Sbjct: 733 VAPTKALVNQIAAEIEARF 751
>UniRef50_UPI0000D56538 Cluster: PREDICTED: similar to activating
signal cointegrator 1 complex subunit 3 isoform a,
partial; n=1; Tribolium castaneum|Rep: PREDICTED: similar
to activating signal cointegrator 1 complex subunit 3
isoform a, partial - Tribolium castaneum
Length = 1407
Score = 52.0 bits (119), Expect = 2e-05
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Frame = +3
Query: 432 TEPVKQYSFI-LDPFQKEAILCIDNLQS-VLVSAHTSAGKTVVAEYAIALSLKNK--QRV 599
TE YSF + Q + C N S VL+ A T +GKT+V+E I N+ ++V
Sbjct: 1241 TEFENLYSFTHFNAVQSQVFHCCFNTDSNVLLGAPTGSGKTIVSEICILRLFANRPERKV 1300
Query: 600 IYTTPIKALSNQKYREFSEEFHDVGL----ITGDVTINPSASCLIMTTEIL 740
+Y P+KAL ++ +++ +F +G +TGDVT P +S LI T+ I+
Sbjct: 1301 VYIAPMKALVRERVLDWTPKFAKIGKKVVEVTGDVT--PHSS-LISTSHII 1348
Score = 37.5 bits (83), Expect = 0.37
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIA----------LSLKNKQRVIYTTPIKALSNQKYREFSE 656
+++L+ A T AGKT +A AI L K+ +++Y P+KAL+ + FS+
Sbjct: 428 ENMLICAPTGAGKTNIALLAIVHQIKAHMEGGLIRKDDFKIVYVCPMKALATEMVSNFSK 487
Query: 657 EFHDVGLITGDVT 695
+ VG++ ++T
Sbjct: 488 KLAPVGIVVKELT 500
>UniRef50_Q2LTY3 Cluster: Helicase; n=1; Syntrophus aciditrophicus
SB|Rep: Helicase - Syntrophus aciditrophicus (strain SB)
Length = 882
Score = 52.0 bits (119), Expect = 2e-05
Identities = 20/59 (33%), Positives = 40/59 (67%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLIT 683
+S+++S+ T++GKT + E A + K++VIY P+K+L+ +KY +F +++ G+ T
Sbjct: 44 KSLIISSPTTSGKTFIGEIAAVKGVMEKKKVIYLVPLKSLAEEKYLDFRKKYESFGIRT 102
>UniRef50_A7EYJ5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1660
Score = 52.0 bits (119), Expect = 2e-05
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Frame = +3
Query: 453 SFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK--NKQRVIYTTPIKAL 626
SFI D +Q++ + +D +S+ V A TSAGKT ++ YA+ L+ N ++Y P KAL
Sbjct: 617 SFIPDGWQRDVLNQLDADKSIFVVAPTSAGKTFISFYAMEQILRADNDGVLVYVAPTKAL 676
Query: 627 SNQKYRE----FSEEFHDVG-----LITGDVTINPSASCLIMTT--EILRNML 752
NQ E FS+ F G + T D +N C I+ T IL+ ML
Sbjct: 677 VNQIAAEVQGRFSKRFPQAGKGVWAIHTRDYRVNNPTGCQILVTVPHILQIML 729
>UniRef50_A5UNL0 Cluster: Archaea-specific helicase; n=1;
Methanobrevibacter smithii ATCC 35061|Rep:
Archaea-specific helicase - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 863
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
Q +LV + T +GKT+V E A Q+ I+ TP+ AL+NQKYR+F ++ +GL
Sbjct: 242 QDLLVVSATGSGKTLVGELAGVTKAMKGQKFIFLTPLVALANQKYRDFKRKYKKLGL 298
>UniRef50_UPI0001554C3B Cluster: PREDICTED: similar to FLJ00040
protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to FLJ00040 protein - Ornithorhynchus anatinus
Length = 1648
Score = 51.6 bits (118), Expect = 2e-05
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYT 608
+P QY FI D +Q+E + +DN +S L+ A TS+GKT + Y + LK V+Y
Sbjct: 703 DPRVQY-FIPDTWQRELLDVVDNNESALIVAPTSSGKTYASYYCMEKVLKESDEGVVVYV 761
Query: 609 TPIKALSNQK----YREFSEEF-HDV---GLITGDVTINPSASCLIMTT 731
+P KAL NQ Y +F++ H + G+ T D + + +C I+ T
Sbjct: 762 SPSKALINQVVATIYNQFTKSLPHGLVIYGVFTRDYRTD-AMNCQILVT 809
>UniRef50_Q582X2 Cluster: ATP-dependent DEAD/H RNA helicase, putative;
n=5; Trypanosoma|Rep: ATP-dependent DEAD/H RNA helicase,
putative - Trypanosoma brucei
Length = 2170
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +3
Query: 423 PLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK--NKQR 596
P+ P + +F D +Q+E + +DN S +V A TSAGKT V+ Y + +L+ N++
Sbjct: 1012 PVIRRPDYRVAFNPDSWQRELLDIVDNRGSAVVCAPTSAGKTFVSYYCMYNTLRRSNRRI 1071
Query: 597 VIYTTPIKALSNQ 635
V+Y P +AL NQ
Sbjct: 1072 VVYLAPARALINQ 1084
>UniRef50_Q5B1R6 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1385
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/66 (37%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSL---KNKQ-RVIYTTPIKALSNQKYREFSEEFHDVGL 677
+V+++A T +GKTVV E AI L K+K+ +V+Y P K+L ++++R+++++FH +GL
Sbjct: 267 NVVIAAPTGSGKTVVMELAICRLLNIRKDKKFKVVYQAPTKSLCSERFRDWNQKFHALGL 326
Query: 678 ITGDVT 695
++T
Sbjct: 327 QCAELT 332
>UniRef50_A7DR62 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: DEAD/DEAH box helicase domain protein
precursor - Candidatus Nitrosopumilus maritimus SCM1
Length = 709
Score = 50.8 bits (116), Expect = 4e-05
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 12/99 (12%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSL-KNKQRVIYTTPIKALSNQKYREFSE-------EF 662
+++LVSA T++GKT++A A+ + KNK +VIY +P++AL+ +K+ EF +
Sbjct: 40 KNILVSAPTASGKTLIAMLAMMSYISKNKGKVIYLSPLRALAAEKFSEFKKLEKVGLGNK 99
Query: 663 HDVGLITGD---VTIN-PSASCLIMTTEILRNMLYRGSE 767
VG+ TGD + N S LI+T E + +++ G+E
Sbjct: 100 TKVGISTGDFENIEKNLEKNSILILTNEKMDSIIRHGAE 138
>UniRef50_O75643 Cluster: U5 small nuclear ribonucleoprotein 200 kDa
helicase; n=35; Eukaryota|Rep: U5 small nuclear
ribonucleoprotein 200 kDa helicase - Homo sapiens (Human)
Length = 2136
Score = 50.8 bits (116), Expect = 4e-05
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Frame = +3
Query: 393 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 542
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 1296 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1355
Query: 543 KTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSEEFHD-----VGLITGDVT 695
KT+ AE+AI L ++ R +Y TP++AL+ Q Y ++ E+F D V L+TG+ +
Sbjct: 1356 KTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQDRLNKKVVLLTGETS 1413
>UniRef50_Q8I3B4 Cluster: DEAD/DEAH box helicase, putative; n=1;
Plasmodium falciparum 3D7|Rep: DEAD/DEAH box helicase,
putative - Plasmodium falciparum (isolate 3D7)
Length = 2536
Score = 50.4 bits (115), Expect = 5e-05
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Frame = +3
Query: 183 EKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSEL--ITDINVDLLQSRIVIHTL 356
E+ ++ + G K +D SKK +S + + DI L+S L
Sbjct: 1140 EESNSKKKISKGKKENNDTKDVNLKKASKKGDVNNSNSIIKSLDDIYKYKLESVKTYSEL 1199
Query: 357 ETHEGCTHEVAIPPNQEYAPLLPLTTEPVK--QYSFILDPFQKEAILCIDNLQSVLVSAH 530
+ E HE + Y LL TT +K + F LD +Q + +D +S+LVS
Sbjct: 1200 KIDENKEHEFQLY-YMYY--LLDRTTGNIKDSRVLFTLDTWQYNILNLVDRRKSILVSCP 1256
Query: 531 TSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVG 674
TS+GKT + Y + L L N VIY P L+ Q Y E + F G
Sbjct: 1257 TSSGKTFICYYVMDKVLRLNNDSVVIYVAPNDTLALQIYHEVNGRFSTKG 1306
>UniRef50_A6SGY3 Cluster: Helicase; n=2; Pezizomycotina|Rep:
Helicase - Botryotinia fuckeliana B05.10
Length = 544
Score = 50.4 bits (115), Expect = 5e-05
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Frame = +3
Query: 453 SFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK--NKQRVIYTTPIKAL 626
SF+ D +Q++ + +D +SV V A TSAGKT ++ YA+ L+ N ++Y P KAL
Sbjct: 161 SFVPDGWQRDVLDQLDANKSVFVVAPTSAGKTFISFYAMEQILRADNDGVLVYVAPTKAL 220
Query: 627 SNQ--------KYR--EFSEEFHDVG-----LITGDVTINPSASCLIMTT--EILRNML 752
NQ YR FS+ F G + T D +N S C I+ T IL+ ML
Sbjct: 221 VNQIAAEVQGKHYRICRFSKRFPQAGKGVWAIHTRDYRVNNSTGCQILVTVPHILQIML 279
>UniRef50_UPI0000F2D63A Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 1645
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +3
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTTPIKA 623
+ FI D +Q+E + +DN +S ++ A TS+GKT V+ Y + LK V+Y +P KA
Sbjct: 691 HHFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYVSYYCMEKILKTSDEGVVVYVSPTKA 750
Query: 624 LSNQ 635
L NQ
Sbjct: 751 LINQ 754
>UniRef50_A7ITW0 Cluster: Putative uncharacterized protein m230R;
n=1; Chlorella virus MT325|Rep: Putative uncharacterized
protein m230R - Chlorella virus MT325
Length = 70
Score = 50.0 bits (114), Expect = 6e-05
Identities = 32/66 (48%), Positives = 34/66 (51%)
Frame = -3
Query: 673 PTS*NSSENSLYF*FERALIGVVYITLCLFFSDRAMAYSATTVLPADV*ADTSTDCKLSI 494
PT N E SL F FE A G+VY T DR AYSAT V P V +T LSI
Sbjct: 3 PTLGNFLEKSLNFWFEMAFRGLVYTTFFFVVIDRCTAYSATMVFPLPVGTAANTLWPLSI 62
Query: 493 HNIASF 476
IASF
Sbjct: 63 DAIASF 68
>UniRef50_Q9XWI5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1798
Score = 50.0 bits (114), Expect = 6e-05
Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Frame = +3
Query: 450 YSF-ILDPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTTPI 617
Y+F +P Q + C+ +S L+ A T +GKT+ AE A+ L++ +V+Y P+
Sbjct: 956 YNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPL 1015
Query: 618 KALSNQKYREFSEEFHD-----VGLITGDVTINP---SASCLIMTT 731
K+L ++ ++ ++F D V ++GDVT +P +AS +++TT
Sbjct: 1016 KSLVRERVDDWKKKFEDGMGYRVVEVSGDVTPDPEELAASSILITT 1061
>UniRef50_Q8PUF4 Cluster: ATP-dependent DNA helicase; n=4;
Methanosarcinaceae|Rep: ATP-dependent DNA helicase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 826
Score = 50.0 bits (114), Expect = 6e-05
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +3
Query: 414 PLLPLTTEPVKQYSFILDPFQKEAILC--IDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 587
PL E + + S L P Q +I ++ +VSA T+ GKT++ E A +L N
Sbjct: 203 PLAKKFKEMLLEKSETLLPVQGLSIEAGLLERKNQFVVSA-TATGKTLIGEMAGVQNLLN 261
Query: 588 KQ-RVIYTTPIKALSNQKYREFSEEFHDVGLIT 683
K+ +++Y P+ AL+NQKY +F+E + +GL T
Sbjct: 262 KKGKMLYLVPLVALANQKYDQFTERYSKLGLTT 294
>UniRef50_A3AMK8 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 2116
Score = 49.6 bits (113), Expect = 9e-05
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Frame = +3
Query: 465 DPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAI------ALSLKNKQRVIYTTPIKA 623
+P Q + N SVLV+A T +GKT+ AE+AI A+S + RV+Y PI+A
Sbjct: 1304 NPIQTQVFTASYNSDDSVLVAAPTGSGKTICAEFAILRNHQKAVSGDSNMRVVYVAPIEA 1363
Query: 624 LSNQKYREFSEEFHDVGLI 680
L+ ++Y+++ +F ++ +
Sbjct: 1364 LAKERYKDWESKFGELARV 1382
>UniRef50_A5K6A5 Cluster: DEAD/DEAH box helicase, putative; n=1;
Plasmodium vivax|Rep: DEAD/DEAH box helicase, putative -
Plasmodium vivax
Length = 2446
Score = 49.6 bits (113), Expect = 9e-05
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +3
Query: 417 LLPLTTEPVK--QYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI--ALSLK 584
LL TT +K + F LD +Q + +D +S+LVS TS+GKT + Y + L L
Sbjct: 1160 LLDRTTGNIKDKRVLFTLDTWQYNILNLVDRRKSILVSCPTSSGKTFICYYVMDKVLRLN 1219
Query: 585 NKQRVIYTTPIKALSNQKYREFSEEFHDVG 674
N V+Y P L+ Q Y E + F G
Sbjct: 1220 NDSVVVYVAPNDTLAFQIYHEVNGRFSTKG 1249
>UniRef50_UPI000049A24D Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 1804
Score = 48.8 bits (111), Expect = 1e-04
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Frame = +3
Query: 381 EVAIPPNQEYAPLL----PLTTEPVKQYSFILD------PFQKEAILCIDNLQSVLVSAH 530
E +P ++ Y L PL T +KQY + P + +C + +V+V A
Sbjct: 970 ESTLPTDESYMTKLLRLHPLPTTALKQYQTFFNFHYFNPPQTQFFFICFNTNNNVIVGAP 1029
Query: 531 TSAGKTVVAEYAIALSLKNK--QRVIYTTPIKALSNQKYREFSEEFHDVGL----ITGDV 692
T +GKTV AE + ++ ++V+Y P+KAL +K ++ ++ +G +TGD
Sbjct: 1030 TGSGKTVAAELCMLKIFRDTPDKKVVYIAPMKALVKEKLSDWKDKLKTLGKNIVELTGDF 1089
Query: 693 TINPSA---SCLIMTT 731
T + +A + +I+TT
Sbjct: 1090 TPDSAAIAKADIILTT 1105
>UniRef50_UPI0000ECC425 Cluster: UPI0000ECC425 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECC425 UniRef100 entry -
Gallus gallus
Length = 1313
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALS 629
FI D +Q+E + +DN +S ++ A TS+GKT + Y + L + ++ V+Y P KAL
Sbjct: 741 FIPDTWQRELLDAVDNNESAVIVAPTSSGKTYASYYCMEKVLKMSDEGVVVYVAPTKALV 800
Query: 630 NQ----KYREFSEEFHDVGLITGDVT 695
NQ Y F+++ D ++ G T
Sbjct: 801 NQVVGSVYSRFTKKLPDGLVVCGVFT 826
>UniRef50_A3ZVS9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Blastopirellula marina DSM
3645|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Blastopirellula marina DSM 3645
Length = 861
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +3
Query: 495 IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVG 674
ID S++V+ TS+GKT +AE I L K+RVIY TP++ALS Q F +G
Sbjct: 15 IDESDSLVVALPTSSGKTRIAELCILKCLAGKRRVIYVTPLRALSAQVEGTLGRCFKPLG 74
Query: 675 LITGDV 692
V
Sbjct: 75 FTVTSV 80
>UniRef50_Q7RYD5 Cluster: Putative uncharacterized protein
NCU04472.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU04472.1 - Neurospora crassa
Length = 1463
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTT 611
P + F D +Q++ + ID +S+LV A TSAGKT ++ YA+ L N ++Y
Sbjct: 584 PDSRVPFEPDAWQRKVLDAIDENKSLLVIAPTSAGKTFISFYAMRKVLEANNDDVLVYIA 643
Query: 612 PIKALSNQKYREFSEEF 662
P KAL NQ E F
Sbjct: 644 PTKALVNQIAAEIQARF 660
>UniRef50_A2DLF9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 857
Score = 48.4 bits (110), Expect = 2e-04
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Frame = +3
Query: 381 EVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQ--SVLVSAHTSAGKTVV 554
E+ IPP ++A + + + + L P+QK + D Q S +V + TS GKT++
Sbjct: 44 ELMIPPFFQHALINGIPPPKITE----LRPWQKGLLATDDWKQNKSCIVVSPTSGGKTLI 99
Query: 555 AEYAIALSLKN--KQRVIYTTPIKALSNQKYREFSEEF 662
AE AIA + + RVIY P AL+ +KY EF + F
Sbjct: 100 AEIAIAQLIDDDPNARVIYALPFVALAMEKYIEFKQRF 137
>UniRef50_A2R2S0 Cluster: Function: DEAD-box helicases are involved in
various aspects of RNA transcription; n=1; Aspergillus
niger|Rep: Function: DEAD-box helicases are involved in
various aspects of RNA transcription - Aspergillus niger
Length = 1863
Score = 48.4 bits (110), Expect = 2e-04
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Frame = +3
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTTPIKA 623
+ F D +Q+E + ID S+ V A TSAGKT ++ YA+ L++ ++Y P KA
Sbjct: 793 HDFEPDRWQREILDQIDAKASLFVVAPTSAGKTFISFYAMKQVLESSDDGVLVYVAPTKA 852
Query: 624 LSNQKYRE----FSEEFHDVG-----LITGDVTINPSASCLIMTT--EILRNML 752
L NQ E FS+ + G + T D IN SC I+ T IL+ ML
Sbjct: 853 LVNQIAAEVQARFSKNYKHAGKSVWAIHTRDYRINNPTSCQILITVPHILQIML 906
>UniRef50_Q97VY9 Cluster: Putative ski2-type helicase; n=6;
Sulfolobaceae|Rep: Putative ski2-type helicase -
Sulfolobus solfataricus
Length = 708
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = +3
Query: 462 LDPFQKEAIL--CIDNLQSVLVSAHTSAGKTVVAEYAI-ALSLKNKQRVIYTTPIKALSN 632
L+P Q EA+ +D +L+++ T +GKT++AE I + LKN + IY TP++AL+N
Sbjct: 24 LNPPQTEAVKKGLLDG-NRLLLTSPTGSGKTLIAEMGIISFLLKNGGKAIYVTPLRALTN 82
Query: 633 QKYREFSE 656
+KY F +
Sbjct: 83 EKYLTFKD 90
>UniRef50_Q2FNA5 Cluster: DEAD/DEAH box helicase-like; n=4;
Methanomicrobiales|Rep: DEAD/DEAH box helicase-like -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 799
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/63 (36%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEE-FHDVGLIT 683
+++L+S T++GKT++AE A+ + + +Y P++AL+++KY EFS++ VG+ T
Sbjct: 40 KNLLISIPTASGKTLLAEMAMWSRIAAGGKCLYIVPLRALASEKYDEFSKKGVIRVGIAT 99
Query: 684 GDV 692
GD+
Sbjct: 100 GDL 102
>UniRef50_Q5UYM9 Cluster: Putative ski2-type helicase; n=2;
Halobacteriaceae|Rep: Putative ski2-type helicase -
Haloarcula marismortui (Halobacterium marismortui)
Length = 799
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 462 LDPFQKEAILC-IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQK 638
L P Q EA+ + ++++ S T++GKT++AE A+ S+ + +Y P++AL+++K
Sbjct: 25 LYPPQAEAVEAGVTEGENLVASIPTASGKTLIAELAMLSSVARGGKALYIVPLRALASEK 84
Query: 639 YREFSEEFHDVGLITGDVTIN 701
+F EEF GL G T N
Sbjct: 85 QADF-EEFEQYGLDIGVSTGN 104
>UniRef50_Q07NP6 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Rhodopseudomonas palustris (strain BisA53)
Length = 1006
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +3
Query: 501 NLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
N S+LV A TS+GKT+V E A ++ ++ ++ P +AL N+K+ +FS F GL
Sbjct: 298 NGNSLLVVAPTSSGKTLVGELAAIRAVTAGKKAVFLLPYRALVNEKFEDFSARFAPAGL 356
>UniRef50_Q0UNS2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1545
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Frame = +3
Query: 393 PPNQEYAPLLPLTTEPVKQYSFILDP-FQKEAILCIDNL----QSVLVSAHTSAGKTVVA 557
PP + L+P++T P + + P F C D + + ++++ T +GKTV+
Sbjct: 246 PPMCQGIQLVPVSTLPDRLRTVFPYPTFNAVQSKCFDTVFGSDDNFVLASPTGSGKTVIL 305
Query: 558 EYAI----ALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSAS 713
E AI A + + +V+Y P KAL +++ R+++ +F +GL ++T + AS
Sbjct: 306 ELAICRAVATNATGQYKVVYQAPTKALCSERQRDWAAKFTPIGLKCAELTGDSDAS 361
>UniRef50_A1D818 Cluster: DEAD/DEAH box helicase, putative; n=3;
Trichocomaceae|Rep: DEAD/DEAH box helicase, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 1797
Score = 47.6 bits (108), Expect = 3e-04
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYT 608
+P + F D +QK+ + +D SV V A TSAGKT ++ YA++ L+ ++Y
Sbjct: 736 KPDDRVGFEPDKWQKDVLDELDKNHSVFVVAPTSAGKTFISFYAMSKVLQEDDTGVLVYV 795
Query: 609 TPIKALSNQKYREFSEEFHD---------VGLITGDVTINPSASCLIMTT 731
P KAL NQ E F + T DV IN C I+ T
Sbjct: 796 APTKALVNQIGAEIHARFRKRYPGPEQTVWAISTRDVRINDPLKCQILVT 845
>UniRef50_Q8TGZ1 Cluster: Archaea-specific Superfamily II helicase;
n=1; Methanopyrus kandleri|Rep: Archaea-specific
Superfamily II helicase - Methanopyrus kandleri
Length = 818
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/53 (41%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYA-IALSLKNKQRVIYTTPIKALSNQKYREFSEEF 662
+++LV + T +GKT+VAE A + L+ ++++Y P+ AL+NQK+REF E++
Sbjct: 227 RNLLVVSPTGSGKTLVAELAGLTEVLREGRKMVYLVPLVALANQKHREFMEKY 279
>UniRef50_UPI000155DED9 Cluster: PREDICTED: hypothetical protein; n=1;
Equus caballus|Rep: PREDICTED: hypothetical protein -
Equus caballus
Length = 1691
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK--NKQRVIYTTPIKALS 629
FI D +Q+E + +DN +S ++ A TS+GKT + Y + L+ N+ V+Y P KAL
Sbjct: 856 FIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKILREGNEGVVVYVAPTKALV 915
Query: 630 NQ 635
NQ
Sbjct: 916 NQ 917
>UniRef50_Q6XGE6 Cluster: Helicase-like protein; n=8; Bacteria|Rep:
Helicase-like protein - Escherichia coli
Length = 964
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 468 PFQKEAI-LCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYR 644
P Q+EA +++ ++VS TSAGKT +AE I L +RV++ TP++ALS Q
Sbjct: 99 PSQREAAGRSVNDNDDLVVSLPTSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEA 158
Query: 645 EFSEEFHDVG 674
S F +G
Sbjct: 159 TLSRTFGPLG 168
>UniRef50_Q6L634 Cluster: Mer3; n=2; Coprinopsis cinerea|Rep: Mer3 -
Coprinus cinereus (Inky cap fungus) (Hormographiella
aspergillata)
Length = 1428
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 14/83 (16%)
Frame = +3
Query: 492 CIDNL----QSVLVSAHTSAGKTVVAEYA-IALSLKNKQ-----RVIYTTPIKALSNQKY 641
C D+L +++++SA T +GKTV+ E A I L ++N+ + +Y P KAL +K+
Sbjct: 204 CFDDLMQTDENLVISAPTGSGKTVLFELAMIRLQMQNRSGSRPSKCVYIAPTKALCTEKF 263
Query: 642 REFSEEFHDVGL----ITGDVTI 698
+++ EF +GL +TGD ++
Sbjct: 264 NDWNTEFAPIGLKCCELTGDTSV 286
>UniRef50_O26752 Cluster: ATP-dependent RNA helicase related
protein; n=1; Methanothermobacter thermautotrophicus
str. Delta H|Rep: ATP-dependent RNA helicase related
protein - Methanobacterium thermoautotrophicum
Length = 837
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLIT 683
+ ++V + T++GKT++AE A ++ IY TP+ AL+NQKYR+F + + L T
Sbjct: 239 EDLMVVSATASGKTLIAELAGIPRALGGEKFIYLTPLVALANQKYRDFRRRYSPLKLKT 297
>UniRef50_Q97AI2 Cluster: Putative ski2-type helicase; n=2;
Thermoplasma|Rep: Putative ski2-type helicase -
Thermoplasma volcanium
Length = 674
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
F L Q+ AI ++++VS T+AGKT++A AI + K K + IY P+++L+ +
Sbjct: 21 FELYDHQRMAIEQFRKGKNIMVSVPTAAGKTLIAYSAIYETFKKKLKSIYIVPLRSLAME 80
Query: 636 KYREFS 653
KY E S
Sbjct: 81 KYEELS 86
>UniRef50_Q4T4J7 Cluster: Chromosome undetermined SCAF9604, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF9604, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1560
Score = 46.4 bits (105), Expect = 8e-04
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +3
Query: 435 EPVKQYSF-ILDPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAIA-LSLKNKQ-RVI 602
E V Q F +P Q + + N +V V A +GKT+ AE+AI + L N + R I
Sbjct: 1118 EAVYQNKFPFFNPIQTQVFNAVYNSDDNVFVGAPNGSGKTICAEFAILRMLLHNAEGRCI 1177
Query: 603 YTTPIKALSNQKYREFSEEFHDV 671
Y TP++AL+ Q + ++ ++F D+
Sbjct: 1178 YITPMEALAEQVFVDWHQKFQDI 1200
>UniRef50_Q5CRN9 Cluster: SPAC694.02. SKI family SFII helicase; n=2;
Cryptosporidium|Rep: SPAC694.02. SKI family SFII helicase
- Cryptosporidium parvum Iowa II
Length = 2123
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALS 629
F D +QK+ + ID+ S LV A T++GKT + YA+ L N+ V++ P KAL+
Sbjct: 1052 FSPDYWQKQILDIIDSGDSALVCAPTASGKTFICYYAMEQVLRFDNESVVVFIAPTKALA 1111
Query: 630 NQKYREFSEEF 662
+Q + E + F
Sbjct: 1112 DQVHAEIAYRF 1122
>UniRef50_A5K419 Cluster: RNA helicase, putative; n=9; Plasmodium|Rep:
RNA helicase, putative - Plasmodium vivax
Length = 2467
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/99 (26%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Frame = +3
Query: 405 EYAPLLPLTTEPVKQYSFI-------LDPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAE 560
E P++PL+T+ +K S+I +P Q + + +++L+ A T +GKTV+ E
Sbjct: 1373 EILPVVPLSTQILKIPSYIKFFSFRYFNPIQTQMFHATFHTDENILLGAPTGSGKTVIGE 1432
Query: 561 YAIALSL--KNKQRVIYTTPIKALSNQKYREFSEEFHDV 671
I +L +++ +Y P+KA+ N++++ ++ +F ++
Sbjct: 1433 LCILRNLLHHEREKAVYVCPMKAIVNERHKSWTSKFKNL 1471
>UniRef50_A2EB56 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 1042
Score = 46.4 bits (105), Expect = 8e-04
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 531 TSAGKTVVAEYAIALSLK-NKQ-RVIYTTPIKALSNQKYREFSEEFHD 668
TS GKTV A+ A+A L+ NK +VIYT P AL+N+KY E+ + F +
Sbjct: 112 TSGGKTVAADLAVAQVLQENKNSKVIYTLPFVALANEKYTEYEKRFFE 159
>UniRef50_Q4P954 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1297
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Frame = +3
Query: 420 LPLTTEPVKQYSFILDPFQKEAILCIDNL----QSVLVSAHTSAGKTVVAEYAIALSLK- 584
LP P+ + F F LC+ + ++V++SA T +GKTV+ E A+ L
Sbjct: 169 LPALYRPLFSFPF----FNAVQSLCLPKVYGSAENVVLSAPTGSGKTVIFELALVRMLSK 224
Query: 585 --NKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVT 695
R +Y P KAL +++ R++S F VG ++T
Sbjct: 225 DAENARAVYLAPTKALCSERTRDWSNRFGSVGCAVTEIT 263
>UniRef50_Q2GQ57 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1206
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 453 SFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKAL 626
SF D +Q++ + ID +SVL A TSAGKT ++ YA+ L + ++Y P KAL
Sbjct: 445 SFHPDAWQRKVLDAIDANKSVLAVAPTSAGKTFISFYAMKKVLQANDDDILVYVAPTKAL 504
Query: 627 SNQKYREFSEEF 662
NQ E F
Sbjct: 505 VNQIAAEIQARF 516
>UniRef50_A0RYB7 Cluster: Superfamily II helicase; n=1; Cenarchaeum
symbiosum|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 707
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/51 (41%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSL-KNKQRVIYTTPIKALSNQKYREFSE 656
+SVLVSA T++GKT++A A+ L +N+ + +Y +P++AL+ +K+ EF +
Sbjct: 40 KSVLVSAPTASGKTLIAAIAMISHLSRNRGKAVYLSPLRALAAEKFAEFGK 90
>UniRef50_Q58524 Cluster: Putative ski2-type helicase (EC 3.6.1.-)
[Contains: Endonuclease PI- MjaHel (EC 3.1.-.-) (Mja Hel
intein) (Mja Pep3 intein)]; n=1; Methanocaldococcus
jannaschii|Rep: Putative ski2-type helicase (EC 3.6.1.-)
[Contains: Endonuclease PI- MjaHel (EC 3.1.-.-) (Mja Hel
intein) (Mja Pep3 intein)] - Methanococcus jannaschii
Length = 1195
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Frame = +3
Query: 435 EPVKQYSFI-LDPFQKEAIL--CIDNLQSVLVSAHTSAGKTVVAEYAIALSL----KN-- 587
E +K + + L P QK+A+ +D ++ L+S T++GKT++ E A+ L KN
Sbjct: 6 EILKDFGIVELRPPQKKALERGLLDKNKNFLISIPTASGKTLIGEMALINHLLDGNKNPT 65
Query: 588 KQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
++ I+ P+KAL+++KY EF ++ GL
Sbjct: 66 NKKGIFIVPLKALASEKYEEFKSKYERYGL 95
>UniRef50_UPI0000E46B70 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1287
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Frame = +3
Query: 513 VLVSAHTSAGKTVVAEYAIALSL------KNKQRVIYTTPIKALSNQKYREFSEEFHDVG 674
++VSA T +GKTV+ E AI L N+ +V+Y PIK L +Q+ E+ E+F +G
Sbjct: 177 LVVSAPTGSGKTVLFELAILRLLISQGGYDNRTKVVYMAPIKVLCSQRCDEWKEKFEPLG 236
Query: 675 L----ITGDVTI 698
L +TGD I
Sbjct: 237 LKCQELTGDTDI 248
>UniRef50_A2ERS7 Cluster: Type III restriction enzyme, res subunit
family protein; n=9; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 1961
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Frame = +3
Query: 393 PPNQEYAPLLPLTT-EPVKQYSF-ILDPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEY 563
PPN P+ + E K + F +P Q + +++L+ A T+AGKT +AE
Sbjct: 969 PPNLRPLPVTSIENIEHRKLFGFEFFNPVQSQVFFQTYRTDENLLICAPTAAGKTSIAEL 1028
Query: 564 AIA--LSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL-ITGDVTINPSA 710
AI S +Q+ +Y P+KA+ ++ +++ +F D + +TG+ T + +A
Sbjct: 1029 AICRLFSTHPEQKAVYLAPLKAIVTERVQDWRMKFGDKLIELTGEFTPDSNA 1080
>UniRef50_UPI00015386DF Cluster: afuHEL308 HELICASE; n=2;
Archaeoglobus fulgidus|Rep: afuHEL308 HELICASE -
Archaeoglobus fulgidus
Length = 702
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/75 (32%), Positives = 46/75 (61%)
Frame = +3
Query: 462 LDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKY 641
L P Q EA+ + + +++L++ T+AGKT++AE A+ + +Y P++AL+ +KY
Sbjct: 26 LFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALAGEKY 85
Query: 642 REFSEEFHDVGLITG 686
F +++ +GL G
Sbjct: 86 ESF-KKWEKIGLRIG 99
>UniRef50_Q7S600 Cluster: Putative uncharacterized protein
NCU09793.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU09793.1 - Neurospora crassa
Length = 1453
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAI---ALSLKNKQ-RVIYTTPIKALSNQKYREFSEEFHDVGL 677
+V+VSA T +GKT + E AI AL N+ +++Y P KAL ++K R++ ++F +GL
Sbjct: 185 NVVVSAPTGSGKTAILELAICKLALDRCNENFKIVYQAPTKALCSEKARDWEKKFSHMGL 244
Query: 678 ITGDVT 695
++T
Sbjct: 245 KCAELT 250
>UniRef50_A7D7W3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Halorubrum lacusprofundi ATCC 49239|Rep: DEAD/DEAH
box helicase domain protein - Halorubrum lacusprofundi
ATCC 49239
Length = 824
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/64 (35%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFS--EEFH-DVGL 677
+S++ + T++GKT++AE A+ S++ + +Y P++AL+++K EF EEF VG+
Sbjct: 41 ESLVAAVPTASGKTLIAELAMLSSIERGGKALYIVPLRALASEKKTEFERWEEFGVTVGV 100
Query: 678 ITGD 689
TG+
Sbjct: 101 STGN 104
>UniRef50_Q4UHC2 Cluster: DEAD-box helicase, putative; n=2;
Theileria|Rep: DEAD-box helicase, putative - Theileria
annulata
Length = 1925
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Frame = +3
Query: 417 LLPLTTEPVKQYSFI----LDPFQKEAI-LCIDNLQSVLVSAHTSAGKTVVAEYAI-ALS 578
L PL T + QY+ +P Q + +S++V+A T +GKT+VAE + L
Sbjct: 1112 LNPLPTSVLNQYNVYKFPYFNPLQTQVFHKAFRTDESLVVAAPTGSGKTLVAELGLFRLF 1171
Query: 579 LKNKQRV-IYTTPIKALSNQKYREFSEEFH--DVGLITGDVTIN 701
K+ ++ +Y P+KAL++++++++ ++ H + +TGD + N
Sbjct: 1172 DKHPDKIAVYIAPLKALAHERFKDWCKKLHFKKILQLTGDTSSN 1215
Score = 36.3 bits (80), Expect = 0.85
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Frame = +3
Query: 381 EVAIPPNQEYAPLLPLTTEPV-KQYSFI----LDPFQKEAILCIDNLQ-SVLVSAHTSAG 542
E I P+++ L+P++T P Q +FI L+ Q + N Q ++L+SA T G
Sbjct: 240 ENRIVPSED--ELIPISTLPEWVQRAFIGVEKLNLIQSKVFNSAFNTQQNLLISAPTGCG 297
Query: 543 KTVVAEYAIALSL-------KNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVT 695
KT V + + K +VIY +P+KAL+++ ++S+ GL+ +VT
Sbjct: 298 KTNVGLLCLLQNYREYFEQGKKCGKVIYISPMKALASEIVEKYSKSLAHSGLVVREVT 355
>UniRef50_Q0W5A2 Cluster: Putative ATP-dependent DNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
ATP-dependent DNA helicase - Uncultured methanogenic
archaeon RC-I
Length = 860
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYA-IALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLIT 683
+S LV + T+ GKT++ E A + L K ++++ P+ AL+NQKY +F + + +GL T
Sbjct: 233 KSQLVVSATATGKTLIGELAGVNNILAGKGKMLFLVPLVALANQKYEQFKKRYSPLGLKT 292
>UniRef50_A6UT61 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanococcus aeolicus Nankai-3
Length = 1265
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Frame = +3
Query: 495 IDNLQSVLVSAHTSAGKTVVAEYAIALSL--KNKQ----RVIYTTPIKALSNQKYREFSE 656
+D ++ L+ T++GKT++ E A L +NKQ + ++ P+KAL+N+KY EF E
Sbjct: 43 LDKNKNFLICIPTASGKTLIGEMAFINHLLDENKQPTGKKGLFIVPLKALANEKYDEFKE 102
Query: 657 EFHDVGL 677
++ GL
Sbjct: 103 KYEKYGL 109
>UniRef50_A2STT3 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Methanomicrobiales|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 903
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYA-IALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDV---G 674
+ +LV A T++GKT + E A + ++ + R+++ P+ AL+NQKY FSE++ V
Sbjct: 228 KDLLVVAATASGKTFIGEMAGLKNYIEKRGRMLFLVPLVALANQKYDRFSEKYKSVTQTS 287
Query: 675 LITGDVTIN 701
++TG +N
Sbjct: 288 IMTGVSRVN 296
>UniRef50_A1DP28 Cluster: DEAD/DEAH box DNA helicase (Mer3),
putative; n=5; Trichocomaceae|Rep: DEAD/DEAH box DNA
helicase (Mer3), putative - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 1449
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/66 (31%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIA---LSLKNKQ-RVIYTTPIKALSNQKYREFSEEFHDVGL 677
+++++A T +GKTV+ E AI +LK+++ +V+Y P K+L ++++R+++ +F +GL
Sbjct: 261 NIVLAAPTGSGKTVIMELAICRLLSTLKDERFKVVYQAPTKSLCSERFRDWNRKFMSLGL 320
Query: 678 ITGDVT 695
++T
Sbjct: 321 QCAELT 326
>UniRef50_Q09475 Cluster: Uncharacterized helicase C28H8.3; n=2;
Caenorhabditis|Rep: Uncharacterized helicase C28H8.3 -
Caenorhabditis elegans
Length = 1714
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +3
Query: 417 LLPLTTEPVKQ---YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 587
L+ + ++P K F D +Q++ + +D S L+ A TSAGKT V+ Y I L++
Sbjct: 767 LIDIQSDPKKDDRVSGFAPDGWQRKMLDSVDRGNSALIIAPTSAGKTFVSYYCIEKVLRS 826
Query: 588 KQR--VIYTTPIKALSNQ 635
V+Y P KAL NQ
Sbjct: 827 SDNDVVVYVAPSKALINQ 844
>UniRef50_Q8TL39 Cluster: Putative ski2-type helicase; n=4;
Euryarchaeota|Rep: Putative ski2-type helicase -
Methanosarcina acetivorans
Length = 730
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/60 (31%), Positives = 42/60 (70%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITG 686
+++L + T++GKT++AE A+ S+ + +Y P++AL+++K+R F ++F ++G+ G
Sbjct: 40 KNLLAAIPTASGKTLLAELAMLKSVLAGGKALYIVPLRALASEKFRRF-QDFSELGIRVG 98
>UniRef50_A7AW09 Cluster: Helicase, putative; n=1; Babesia bovis|Rep:
Helicase, putative - Babesia bovis
Length = 1798
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Frame = +3
Query: 465 DPFQKEAI-LCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTTPIKALSNQ 635
+P Q + + C+ + ++LV A T +GKTVVAE A+ + + ++V+Y P+KAL+ +
Sbjct: 1046 NPLQTQMLSYCLYHDDNLLVGAPTGSGKTVVAELAMFRLWRTQVCKKVVYIAPLKALAYE 1105
Query: 636 KYREFSEE---FHDVGLITGD 689
+ ++++++ F V +TGD
Sbjct: 1106 RLKDWNKKFGMFKKVVEVTGD 1126
Score = 37.9 bits (84), Expect = 0.28
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKN-------KQRVIYTTPIKALSNQKYREFSEEFH 665
Q++L+SA T GKT VA + ++ +V+Y P+KAL+++ +FS+
Sbjct: 185 QNMLISAPTGCGKTNVALLCALQNFESYFNGGEKNTKVVYVAPMKALASEVTGKFSKSLV 244
Query: 666 DVGLITGDVT 695
D+GL +VT
Sbjct: 245 DLGLRVREVT 254
>UniRef50_Q6CR67 Cluster: Similar to sp|P51979 Saccharomyces
cerevisiae YGL251c HFM1 DNA/RNA helicase; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P51979
Saccharomyces cerevisiae YGL251c HFM1 DNA/RNA helicase -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 1087
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Frame = +3
Query: 417 LLPLTTEPVK-QYSFILDPFQKEAILCIDNL----QSVLVSAHTSAGKTVVAEYAIALSL 581
LLP++ P Q F + F + +N+ ++ +V++ T +GKTV+ E AI ++
Sbjct: 49 LLPVSVLPDSAQCIFPFENFNRMQTESFENIYRSNENCIVTSPTGSGKTVLFELAILNAM 108
Query: 582 KNKQR-----VIYTTPIKALSNQKYREFSEEF--HDVGLITGDVT 695
R V+Y P K+L N+KY+++ +F VG++T D +
Sbjct: 109 NRLDRPSSVKVLYIAPTKSLCNEKYQQWKSKFIMLSVGMLTSDTS 153
>UniRef50_A4QWU8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1508
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIA--LSLKNKQ--RVIYTTPIKALSNQKYREFSEEFHDVGL 677
+V+VSA T +GKT + E AI LS Q +VIY P KAL +++ R++ +F + L
Sbjct: 271 NVVVSAPTGSGKTAIFELAICKLLSQNTDQNFKVIYVAPTKALCSERARDWESKFRHLNL 330
Query: 678 ITGDVT 695
+ ++T
Sbjct: 331 TSAELT 336
>UniRef50_Q5JF65 Cluster: DEAD/DEAH box RNA helicase; n=4;
Thermococcaceae|Rep: DEAD/DEAH box RNA helicase -
Pyrococcus kodakaraensis (Thermococcus kodakaraensis)
Length = 832
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/57 (31%), Positives = 36/57 (63%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
+++LV + T++GKT++ E A +++++ P+ AL+NQKY +F + +GL
Sbjct: 233 ENLLVVSATASGKTLIGELAGVPKAMQGKKLLFLVPLVALANQKYEDFKRRYSKLGL 289
>UniRef50_A0CXW7 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_30, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2116
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +3
Query: 444 KQYSFILDPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAIALSLKNKQ--RVIYTTP 614
+QY + +P Q + + N ++L+ A T +GKT++AE+A+ K +++Y P
Sbjct: 1327 EQYKYF-NPIQTQVFFGLYNTDDNILIGAPTGSGKTIMAEFAMLRVFKQSPQFKIVYIAP 1385
Query: 615 IKALSNQKYREFSEEFHDVGL----ITGDVT 695
+KA++ ++ ++++ ++ +TGD T
Sbjct: 1386 LKAIAKERLLDWTKRLKNINKNVLELTGDYT 1416
Score = 33.1 bits (72), Expect = 7.9
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSL------KNKQ- 593
E K+ + I +A L +NL LV A T AGKT +A AI L K K+
Sbjct: 454 EGTKRLNVIQSQIYPKAFLTEENL---LVCAPTGAGKTNIALLAILQELSKRVDQKEKRL 510
Query: 594 -----RVIYTTPIKALSNQKYREFSEEFHDVGL----ITGDVTIN 701
+++Y +P+KAL+++ +F + +G+ TGD+ ++
Sbjct: 511 KDQDFKIVYISPMKALASEIVEKFQTKLRYLGVKVKEFTGDMQLS 555
>UniRef50_A4RI58 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1679
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 453 SFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTTPIKAL 626
SF D +Q++ + ID +S+ V A TSAGKT ++ YA+ +++ ++Y P KAL
Sbjct: 721 SFNPDAWQRKVLDAIDAKKSLCVIAPTSAGKTFISFYAMKKVMQSSDNDVLVYVAPTKAL 780
Query: 627 SNQKYREFSEEF 662
NQ E F
Sbjct: 781 VNQIAAEVQGRF 792
>UniRef50_Q3IU46 Cluster: ATP-dependent DNA helicase 1; n=1;
Natronomonas pharaonis DSM 2160|Rep: ATP-dependent DNA
helicase 1 - Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678)
Length = 747
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITG 686
+S++ S T++GKT+VA+ A+ ++ +Y P++AL+++K EF+ F + GL G
Sbjct: 41 ESLVASVPTASGKTLVAQLAMLSAIDRGGTALYIVPLRALASEKREEFA-AFEEYGLSVG 99
Query: 687 DVT 695
T
Sbjct: 100 VTT 102
>UniRef50_Q16RG8 Cluster: ATP-dependent DNA helicase mer3; n=2;
Aedes aegypti|Rep: ATP-dependent DNA helicase mer3 -
Aedes aegypti (Yellowfever mosquito)
Length = 1199
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIA---LSLKNKQ-----RVIYTTPIKALSNQKYREFSEEF 662
+S++VSA T +GKT + E A+ + L++ + R+IY PIKAL +K+ ++ +F
Sbjct: 66 KSLVVSAPTGSGKTAIFELAMVRLLMKLEDSRYEGDYRMIYIAPIKALCAEKFADWKGKF 125
Query: 663 HDVGLITGDVT 695
+G+ T +VT
Sbjct: 126 EPLGVKTAEVT 136
>UniRef50_A7AMF4 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 1996
Score = 43.2 bits (97), Expect = 0.007
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 465 DPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQK 638
D +QK + +DN +S LV A TS GKT + YA+ L L ++ VIY +P AL+ Q
Sbjct: 952 DAWQKILLDTVDNRESSLVVAPTSTGKTYICYYAMEQGLRLDDEGIVIYVSPNNALALQV 1011
Query: 639 YREFSEEF 662
E + F
Sbjct: 1012 KYEITARF 1019
>UniRef50_A4FXS4 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Methanococcus|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 747
Score = 43.2 bits (97), Expect = 0.007
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Frame = +3
Query: 462 LDPFQKEAIL--CIDNLQSVLVSAHTSAGKTVVAEYAIALSL--KNK----QRVIYTTPI 617
L P QK+ I D ++ L+ T++GKT++ E A+ + +NK ++ ++ P+
Sbjct: 15 LRPPQKKVIDEGLFDKTKNFLICIPTASGKTLIGEMALLNHILDENKNLTGKKGLFIVPL 74
Query: 618 KALSNQKYREFSEEFH----DVGLITGDVTINPSAS---CLIMTTEILRNMLYRGSE 767
KAL+N+K+ EF E++ VGL GD + S +I T+E L +++ E
Sbjct: 75 KALANEKFDEFREKYEKYGIKVGLSIGDFDTKENLSKFHIIITTSEKLDSLMRHNVE 131
>UniRef50_UPI0000D56C16 Cluster: PREDICTED: similar to CG5205-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5205-PA - Tribolium castaneum
Length = 1180
Score = 42.7 bits (96), Expect = 0.010
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSL-----KNKQRVIYTTPIKALSNQKYREFSEEFHDV 671
QS++VSA T +GKT + E AI L K +++Y P+KAL ++ +++++F +
Sbjct: 72 QSIVVSAPTGSGKTAIFELAIVRLLIASESSQKFKIVYICPMKALCEERLVDWNKKFSNF 131
Query: 672 GL----ITGD 689
G+ +TGD
Sbjct: 132 GINPISVTGD 141
>UniRef50_A1HG55 Cluster: Superfamily II helicase-like; n=2;
Ralstonia pickettii|Rep: Superfamily II helicase-like -
Ralstonia pickettii 12J
Length = 298
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF 662
S+LV + TS GKT +A +AIA ++N R +Y +AL+ QK+ +F F
Sbjct: 46 SMLVVSPTSTGKTQLAVWAIAKGIENDCRTVYLVTHRALAKQKFDDFKSLF 96
>UniRef50_Q5BWF5 Cluster: SJCHGC05170 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05170 protein - Schistosoma
japonicum (Blood fluke)
Length = 263
Score = 42.7 bits (96), Expect = 0.010
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 354 LETHEGCTHEVAIPPNQEYAPLLP-LTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAH 530
+ T + C I P L L P + F LD FQK AILC++N +
Sbjct: 175 VRTRKPCESYAIIEDTTTPLPTLTKLIQNPALNWDFELDTFQKRAILCLENNPDNICCRS 234
Query: 531 TSAGKTVVAEYAIALSLKNKQRVIYTTP 614
+ AEYA A+ L+ R IY +P
Sbjct: 235 HIIWEKQYAEYACAVWLRRGSRGIYYSP 262
>UniRef50_Q4MZ24 Cluster: DEAD box RNA helicase, putative; n=1;
Theileria parva|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 2359
Score = 42.7 bits (96), Expect = 0.010
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Frame = +3
Query: 216 GNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIP 395
G K+ +S+K + E LIT+ +D ++ + EG ++ +
Sbjct: 1033 GKKKGSKQNNPEPNLISEKGKSE---LNLITEREMDRVKKDHEVWDFAIFEGTEYDYMLC 1089
Query: 396 -PNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI- 569
+ L T +P + F D +QK + +D +S LV A TS GKT + YA+
Sbjct: 1090 YMGDVFERTLGSTNDP--RVLFRPDAWQKMLLDIVDAKESALVVAPTSTGKTYICYYAME 1147
Query: 570 -ALSLKNKQRVIYTTPIKALSNQKYREFSEEF 662
L L ++ VIY P AL+ Q E + F
Sbjct: 1148 QVLRLDDQGMVIYVAPNTALALQVTYEITARF 1179
>UniRef50_Q1JTA7 Cluster: Dead/deah box helicase, putative; n=1;
Toxoplasma gondii RH|Rep: Dead/deah box helicase,
putative - Toxoplasma gondii RH
Length = 2471
Score = 42.7 bits (96), Expect = 0.010
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK----------NKQRVIY 605
F D +Q + ID +SV V+A TS+GKT + YA+ L L+ N ++Y
Sbjct: 1387 FTPDYWQVRLLDLIDRRESVFVTAPTSSGKTFICFYAMELVLRCPLRGEKAIDNDAVIVY 1446
Query: 606 TTPIKALSNQKYREFSEEF 662
+P KAL++Q Y E F
Sbjct: 1447 VSPSKALADQVYAEVHGRF 1465
>UniRef50_A2ER07 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 774
Score = 42.7 bits (96), Expect = 0.010
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +3
Query: 462 LDPFQKEAILCID-NLQ-SVLVSAHTSAGKTVVAEYAIALSLKNKQ--RVIYTTPIKALS 629
L P+Q+ +L + LQ + +V A T+ GKT++AE A A +L+ +++Y P AL+
Sbjct: 55 LRPWQRSLLLKAEWQLQKNAIVLAPTAGGKTLIAEVAFAQALERNPSAKILYCVPFVALA 114
Query: 630 NQKYREFSEEFHDV 671
+KY F+ F V
Sbjct: 115 TEKYNLFTLRFPSV 128
>UniRef50_A2DKN3 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 848
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKNKQ--RVIYTTPIKALSNQKYREFSEEF 662
+ +V TS GKTV A+ A+A L+ ++IY P AL+N+KY E+ + F
Sbjct: 104 NTIVLVPTSGGKTVAADLAMAQVLEKDPTAKIIYALPFVALANEKYSEYEQRF 156
>UniRef50_A2D9Y6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 787
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKN--KQRVIYTTPIKALSNQKYREFSEEF 662
++++V T+ GKTV AE AIA L+ +++Y P +L+ +KY +FS+ F
Sbjct: 60 KNIVVKVPTAGGKTVAAEVAIAQQLEADITSKILYCVPFVSLAAEKYTQFSQRF 113
>UniRef50_A2PYH4 Cluster: Helicase-like protein HFM1; n=21;
Deuterostomia|Rep: Helicase-like protein HFM1 - Homo
sapiens (Human)
Length = 1435
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ------RVIYTTPIKALSNQKYREFSEEFHD 668
++ ++ A T +GKTVV E AI L +++Y PIKAL +Q++ ++ E+F
Sbjct: 297 RNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGP 356
Query: 669 VGL----ITGDVTIN 701
+GL +TGD ++
Sbjct: 357 IGLNCKELTGDTVMD 371
>UniRef50_Q6KZ87 Cluster: Helicase involved in UV-protection; n=2;
Thermoplasmatales|Rep: Helicase involved in
UV-protection - Picrophilus torridus
Length = 674
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/64 (32%), Positives = 40/64 (62%)
Frame = +3
Query: 456 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
F L Q +AI + N ++V+VS T++GK+++ YAI + ++ +Y P+++L+ +
Sbjct: 19 FELYKHQIDAIERLKNNENVIVSVPTASGKSLIGYYAIYKAFLAGKKSMYIVPLRSLAME 78
Query: 636 KYRE 647
KY E
Sbjct: 79 KYEE 82
>UniRef50_O73946 Cluster: Putative ski2-type helicase; n=3;
Pyrococcus|Rep: Putative ski2-type helicase - Pyrococcus
furiosus
Length = 720
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/58 (32%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ-RVIYTTPIKALSNQKYREFSEEFHDVGL 677
++ L+S T++GKT++AE A+ + + + +Y P+KAL+ +K++EF +++ +GL
Sbjct: 40 KNALISIPTASGKTLIAEIAMVHRILTQGGKAVYIVPLKALAEEKFQEF-QDWEKIGL 96
>UniRef50_A2DQY6 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 898
Score = 42.3 bits (95), Expect = 0.013
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAI---ALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
+++++SA T GKTVVAE A+ + ++Y +P++AL +K R+++E + G+
Sbjct: 44 KNIMLSAPTGCGKTVVAELAMISAVMKYNYPTLMLYVSPLRALCQEKVRDWTERLNKCGI 103
Query: 678 ITGDVT 695
+ T
Sbjct: 104 AVQEYT 109
>UniRef50_Q5AHI6 Cluster: Putative uncharacterized protein HFM1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein HFM1 - Candida albicans (Yeast)
Length = 1181
Score = 42.3 bits (95), Expect = 0.013
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Frame = +3
Query: 474 QKEAILCIDNLQS-VLVSAHTSAGKTVVAEYAIALSLKNKQ----RVIYTTPIKALSNQK 638
Q +A I N + ++S+ T +GKTV+ E AI L+ + +V+Y P KAL +++
Sbjct: 92 QSKAFSSIYNSSNNCVISSPTGSGKTVLFELAILRELEQEFEPNFKVLYLAPTKALCSER 151
Query: 639 YREFSEEFHD----VGLITGDVTI----NPSASCLIMTTEILRNMLYR 758
+++++F VG++TGD T N S +I++T +M+ R
Sbjct: 152 LNDWTKKFSSLNITVGILTGDTTFKEAENVRKSNIIVSTPEKWDMITR 199
>UniRef50_Q8R9U4 Cluster: RecG-like helicase; n=9; Clostridia|Rep:
RecG-like helicase - Thermoanaerobacter tengcongensis
Length = 682
Score = 41.9 bits (94), Expect = 0.017
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Frame = +3
Query: 477 KEAILCI--DNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREF 650
KE IL + D + + L+ +GKT+VA +A+ ++ KN +V P + L+ Q Y+
Sbjct: 266 KEIILDMASDKVMNRLIQGDVGSGKTIVAAFAMYIAAKNGYQVAMMAPTEILAKQHYKTL 325
Query: 651 SEEFHD----VGLITGDVT 695
E F +GL++G ++
Sbjct: 326 EEIFKGTDIRIGLLSGSLS 344
>UniRef50_Q8I592 Cluster: Elongation factor g, putative; n=1;
Plasmodium falciparum 3D7|Rep: Elongation factor g,
putative - Plasmodium falciparum (isolate 3D7)
Length = 803
Score = 41.9 bits (94), Expect = 0.017
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 432 TEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAE 560
T P K Y+F L K + CIDNL+++ +SAH AGKT + E
Sbjct: 20 TIPNKIYNFYLSGLCKFSSCCIDNLRNIGISAHIDAGKTTLTE 62
>UniRef50_Q4UBB2 Cluster: Dead/deah-like helicase, putative; n=1;
Theileria annulata|Rep: Dead/deah-like helicase, putative
- Theileria annulata
Length = 2161
Score = 41.9 bits (94), Expect = 0.017
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +3
Query: 285 EEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIP-PNQEYAPLLPLTTEPVKQYSFI 461
+ D ++++ ++D ++ + EG ++ + + L T +P + F
Sbjct: 964 KSDLNMVSEKDIDKVRRESEVWDFAIFEGTEYDYMLCYMGDVFERTLGSTNDP--RVLFR 1021
Query: 462 LDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQ 635
D +QK + +D +S LV A TS GKT + YA+ L L + VIY P AL+ Q
Sbjct: 1022 PDAWQKMLLDIVDAKESALVVAPTSTGKTYICYYAMEQVLRLDDLGMVIYVAPNTALALQ 1081
Query: 636 KYREFSEEF 662
E + F
Sbjct: 1082 VTYEITARF 1090
>UniRef50_Q5JGV6 Cluster: Putative ski2-type helicase (EC 3.6.1.-)
[Contains: Endonuclease PI- PkoHel (EC 3.1.-.-) (Pko Hel
intein)]; n=2; Thermococcus kodakarensis KOD1|Rep:
Putative ski2-type helicase (EC 3.6.1.-) [Contains:
Endonuclease PI- PkoHel (EC 3.1.-.-) (Pko Hel intein)] -
Pyrococcus kodakaraensis (Thermococcus kodakaraensis)
Length = 1125
Score = 41.9 bits (94), Expect = 0.017
Identities = 18/51 (35%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ-RVIYTTPIKALSNQKYREFSE 656
++++++ T++GKT+V+E + L ++ + +Y P+KAL+ +KYREF E
Sbjct: 40 KNLVLAIPTASGKTLVSEIVMVNKLLSEGGKAVYLVPLKALAEEKYREFKE 90
>UniRef50_Q4DJ49 Cluster: ATP-dependent RNA helicase, putative; n=4;
Trypanosoma|Rep: ATP-dependent RNA helicase, putative -
Trypanosoma cruzi
Length = 2240
Score = 41.5 bits (93), Expect = 0.023
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Frame = +3
Query: 357 ETHEGCTHEVAIPPNQEYAPLLPLTTEPV-KQYSFI----LDPFQKEAILC-IDNLQSVL 518
ETH+ EYA P++ P Q +F L+P Q + C + +++L
Sbjct: 377 ETHDEVVLPATASATSEYART-PVSAFPEWAQVAFSGVTHLNPMQSKTFDCAFGSDENML 435
Query: 519 VSAHTSAGKTVVAEYAIALSLKN-----------KQRVIYTTPIKALSNQKYREFSEEFH 665
V A T AGKT +A A+ ++KN + +++Y P+KAL + R FS
Sbjct: 436 VCAPTGAGKTNIAMMAMLRAVKNATARSGAINLRELKMVYVAPMKALVQEVVRTFSNRLE 495
Query: 666 DVGL----ITGDVTINP---SASCLIMTT 731
+GL ++GD N S + LI+TT
Sbjct: 496 QLGLTVVELSGDSNANQAQLSDAQLIVTT 524
>UniRef50_A2DN52 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 2043
Score = 41.5 bits (93), Expect = 0.023
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSEEF 662
+++L+SA T AGKT++A A+ +L +N + IY P+K+L + +F+E F
Sbjct: 383 ENLLISAPTGAGKTIIAVLAMIKTLLTENNSKAIYIAPMKSLVQEMVAKFTEIF 436
>UniRef50_Q8SRW4 Cluster: Putative RNA HELICASE OF THE SKI2
SUBFAMILY; n=1; Encephalitozoon cuniculi|Rep: Putative
RNA HELICASE OF THE SKI2 SUBFAMILY - Encephalitozoon
cuniculi
Length = 1337
Score = 41.5 bits (93), Expect = 0.023
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 465 DPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTTPIKALSNQ 635
D +Q + +D +S ++SA TSAGKT + YAI L+ VI+ P KAL NQ
Sbjct: 517 DEWQVRLLDLVDQNKSAVISAPTSAGKTFICFYAIEKVLRESDTDVVIFCLPTKALVNQ 575
>UniRef50_Q2GRG2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1300
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAI---ALSLKNKQ-RVIYTTPIKALSNQKYREFSEEFHDVGL 677
+V+++A T +GKT + E AI AL N+ +++Y P KAL ++K R++ ++F + L
Sbjct: 90 NVVIAAPTGSGKTAILELAICKLALDRGNENFKIVYQAPTKALCSEKARDWEKKFGHMNL 149
Query: 678 ITGDVT 695
++T
Sbjct: 150 KCAELT 155
>UniRef50_O26901 Cluster: Putative ski2-type helicase; n=3;
Methanobacteriaceae|Rep: Putative ski2-type helicase -
Methanobacterium thermoautotrophicum
Length = 690
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 462 LDPFQKEAILC--IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
L+P Q+ AI +++ + +++ T++GKT++ A ++ RVIYT P+ ++ N+
Sbjct: 22 LNPAQRSAIEAGYLESEDNYIIAIPTASGKTLLGIIAALKTVMEGGRVIYTVPLLSIQNE 81
Query: 636 KYREFSE-EFHDV 671
K +EF + E H +
Sbjct: 82 KIKEFRKLEEHGI 94
>UniRef50_Q5FLR8 Cluster: ATP-dependent helicase; n=9; Bacteria|Rep:
ATP-dependent helicase - Lactobacillus acidophilus
Length = 743
Score = 40.7 bits (91), Expect = 0.039
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +3
Query: 462 LDPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAIALSL-KNKQ---RVIYTTPIKAL 626
L P Q A I N +VL+SA T++GKT A + I + + KQ +V+Y P+KAL
Sbjct: 23 LRPIQVAAAEEIFNTDHNVLLSASTASGKTEAAFFPILSDIYEEKQDSVKVLYIAPLKAL 82
Query: 627 SNQKYREFSEEFHDVGL 677
N +Y +E DV +
Sbjct: 83 INDQYERLTELCQDVDI 99
>UniRef50_Q0YV15 Cluster: Helicase-like:Type III restriction enzyme,
res subunit:DEAD/DEAH box helicase-like; n=1; Chlorobium
ferrooxidans DSM 13031|Rep: Helicase-like:Type III
restriction enzyme, res subunit:DEAD/DEAH box
helicase-like - Chlorobium ferrooxidans DSM 13031
Length = 1131
Score = 40.7 bits (91), Expect = 0.039
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 405 EYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 584
+YA LL L PV + + E L DNL V V+ TSAGKT VAE AI L+
Sbjct: 268 DYASLLALVKPPVTEL-WRSQLAALELALNGDNLGGV-VNLRTSAGKTRVAELAILKELR 325
Query: 585 --NKQRVIYTTPIKALSNQKYREFSEEFHDVG 674
+ +V+Y P ++L+ + R F + +G
Sbjct: 326 ANSTAKVLYLAPFRSLAFELERTFEKYLGALG 357
>UniRef50_A5VH29 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Sphingomonas wittichii RW1|Rep: DEAD/DEAH box
helicase domain protein - Sphingomonas wittichii RW1
Length = 739
Score = 40.7 bits (91), Expect = 0.039
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +3
Query: 474 QKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR----VIYTTPIKALSNQKY 641
QK + D+ +L+SA T+AGKT A + + +Q ++Y P+KAL N +Y
Sbjct: 39 QKASRALFDSRADLLISASTAAGKTEAAFLPLLSQMAGRQEAGVAILYVAPLKALINDQY 98
Query: 642 REFSE 656
SE
Sbjct: 99 ARLSE 103
>UniRef50_Q4QE98 Cluster: ATP-dependent RNA helicase, putative; n=4;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 2368
Score = 40.7 bits (91), Expect = 0.039
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Frame = +3
Query: 351 TLETHEGCTHEVAIPPNQEY---APLLPLTTE----PVKQYSFI--LDPFQKEAILC-ID 500
T ETH+ EV +PP Y PL+ + T V +S + L+ Q + C
Sbjct: 442 TYETHD----EVLLPPTSSYNTSTPLIRVATSFPSWAVPVFSGVEELNAMQSKVYDCAFH 497
Query: 501 NLQSVLVSAHTSAGKTVVAEYAIALSLK------------NKQRVIYTTPIKALSNQKYR 644
+ +++LVSA T AGKT VA A+ ++ + +++Y P+KAL + R
Sbjct: 498 SDENMLVSAPTGAGKTNVAMMAMLRTIAAARNPVTGVIDGHSLKMVYVAPMKALVQEVVR 557
Query: 645 EFSEEFHDVGLITGDVT 695
FS+ +GL +++
Sbjct: 558 TFSKRLESLGLTVAELS 574
>UniRef50_Q9SYP1 Cluster: F9H16.5 protein; n=35; Eukaryota|Rep:
F9H16.5 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 2171
Score = 40.3 bits (90), Expect = 0.052
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Frame = +3
Query: 393 PPNQEYAPLLPLTTEPVKQYSFIL--------DPFQKEAILCIDNLQ-SVLVSAHTSAGK 545
PP E L PL ++ ++ + +P Q + + N +VLV+A T +GK
Sbjct: 1320 PPPTELLDLQPLPVTALRNPNYEILYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGK 1379
Query: 546 TVVAEYAIALSLKN----KQRVIYTTPIKALSNQKYREFSEEF 662
T+ AE+AI + RV+Y P++A++ +++R + +F
Sbjct: 1380 TICAEFAILRNHHEGPDATMRVVYIAPLEAIAKEQFRIWEGKF 1422
>UniRef50_Q914M3 Cluster: Putative helicase; n=1; Sulfolobus
islandicus filamentous virus|Rep: Putative helicase -
Sulfolobus islandicus filamentous virus
Length = 601
Score = 39.9 bits (89), Expect = 0.069
Identities = 23/73 (31%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 453 SFILDPFQKEAILC-IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALS 629
S L+ FQK+A+ + + +++L++A T GK+ +A + ++++ K RV+YT P++AL+
Sbjct: 5 SIQLNEFQKKALQSFLMSDKNLLITAPTGTGKSFLA---MLMAMETKSRVVYTVPLRALA 61
Query: 630 NQKYREFSEEFHD 668
Q +++FH+
Sbjct: 62 LQ----LNDDFHN 70
>UniRef50_A3IZE6 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Cyanothece sp. CCY 0110|Rep: DEAD/DEAH box helicase-like
protein - Cyanothece sp. CCY 0110
Length = 522
Score = 39.9 bits (89), Expect = 0.069
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = +3
Query: 417 LLPLTTEPVKQYSFILDPFQKEAI------LCIDNLQSVLVSAHTSAGKTVVAEYAIALS 578
++ L P K F L P+Q + + L D Q VLV A T AGKTV+A +
Sbjct: 1 MVALHFAPQKPSPFKLRPYQAQVVESVHQQLKTDQRQRVLVVAGTGAGKTVIASHLTQDF 60
Query: 579 LKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEIL 740
L ++V++ L Q +F+ H G+I G +N S + + + L
Sbjct: 61 LLQNKKVLFLVHRDILVKQTVSKFTHLPH--GIIAGRHQLNLSQPLQVASVQTL 112
>UniRef50_Q4QGA4 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative - Leishmania
major
Length = 1985
Score = 39.9 bits (89), Expect = 0.069
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTTPIKALSNQKYREFSEEFHDVGL- 677
Q+V + A T +GKT+ AE AI + ++V+Y P+KAL ++ R++ VG
Sbjct: 1165 QNVFLGAPTGSGKTIAAEMAILRVFEQYPGKKVVYIAPLKALVKERLRDWKARMMLVGRS 1224
Query: 678 ---ITGDVTINPSA 710
++GD T + SA
Sbjct: 1225 VVELSGDATPDISA 1238
>UniRef50_A2EUT9 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 876
Score = 39.9 bits (89), Expect = 0.069
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTTPIKALSNQKYREFSEEF 662
+S + A TS GKT++AE AI+ L + ++IY P AL+++K+ +F + F
Sbjct: 58 KSCVCVAPTSGGKTLIAEIAISQLLDDNPHAKIIYALPFVALASEKFLDFEKRF 111
>UniRef50_Q1E6Y7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1513
Score = 39.9 bits (89), Expect = 0.069
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 519 VSAHTSAGKTVVAEYAIALSLK----NKQRVIYTTPIKALSNQKYREFSEEFHDVGLITG 686
+SA T +GKTVV E AI + N+ +V+Y P K+L ++++R++ +F L
Sbjct: 298 ISAPTGSGKTVVMELAICRLISKIKDNRFKVVYQAPTKSLCSERFRDWCAKFAAFDLQCA 357
Query: 687 DVT 695
++T
Sbjct: 358 ELT 360
>UniRef50_A7F217 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1689
Score = 39.9 bits (89), Expect = 0.069
Identities = 18/66 (27%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKN----KQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
+++VSA T +GKT + E AI +++ + +++Y PIK+L +++ ++++++F + L
Sbjct: 371 NIVVSAPTGSGKTALMELAICKLVESHGSGQFKIVYQAPIKSLCSERMKDWTKKFSHLNL 430
Query: 678 ITGDVT 695
++T
Sbjct: 431 PVAELT 436
>UniRef50_Q8TH00 Cluster: Predicted Superfamily II helicase; n=1;
Methanopyrus kandleri|Rep: Predicted Superfamily II
helicase - Methanopyrus kandleri
Length = 711
Score = 39.9 bits (89), Expect = 0.069
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = +3
Query: 462 LDPFQKEAI-LCIDNLQSVLVSAHTSAGKTVVAEYAIALSL---KNKQRVIYTTPIKALS 629
L P Q+EA+ + + +++L++A T++GKT++AE L + RV+Y P +AL+
Sbjct: 30 LFPPQREAVEKGLFDDENLLIAAPTASGKTLLAEMRALHELIESHGETRVVYVVPFRALA 89
Query: 630 NQKYREFS 653
+KY E +
Sbjct: 90 REKYEELT 97
>UniRef50_A6CAB6 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Planctomyces maris DSM 8797|Rep: DEAD/DEAH box
helicase-like protein - Planctomyces maris DSM 8797
Length = 1532
Score = 39.5 bits (88), Expect = 0.091
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Frame = +3
Query: 474 QKEAILCIDNLQSVLVSAHTSAGKTVVA---------EYAIALSLKNKQRVIYTTPIKAL 626
Q++ CI+ + L+SA T +GKT+ A + ++A L ++ VIY +P++AL
Sbjct: 25 QQQGWPCINRGEHTLISAPTGSGKTLTAFLSVIDRLVKRSLAGDLDDETSVIYVSPLRAL 84
Query: 627 SNQKYREFSEEFHDV 671
SN +R + ++
Sbjct: 85 SNDMHRNLEQPLEEI 99
>UniRef50_Q6FRL6 Cluster: Similar to sp|P51979 Saccharomyces
cerevisiae YGL251c HFM1; n=1; Candida glabrata|Rep:
Similar to sp|P51979 Saccharomyces cerevisiae YGL251c
HFM1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1089
Score = 39.5 bits (88), Expect = 0.091
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Frame = +3
Query: 435 EPVKQYSFILDPFQKEAILCIDNL----QSVLVSAHTSAGKTVVAEYAIALSLKNKQ--- 593
E ++Y F D F K +C + L S +++ +++GKTV+ E +I +L+ +
Sbjct: 118 EKWREY-FDFDEFNKIQSICANKLYEKNNSFVINTPSNSGKTVLLEISILKALETYEQQN 176
Query: 594 ----RVIYTTPIKALSNQKYREFSEEFHD--VGLITGDV 692
+VIY +P+K++ +KY + +F + V LIT D+
Sbjct: 177 NTGLKVIYISPMKSICLEKYNRWKAKFTNLKVQLITSDM 215
>UniRef50_Q5KBY3 Cluster: DNA helicase, putative; n=1;
Filobasidiella neoformans|Rep: DNA helicase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1465
Score = 39.5 bits (88), Expect = 0.091
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Frame = +3
Query: 339 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDP-FQKEAILCIDNL--- 506
I T+ + E ++ N+ PL+PL+ P+ Q P F D++
Sbjct: 152 ITAETIRSREELRNKAVF--NKNGKPLVPLSRLPIDQRKLFKFPCFNNVQSEVFDDVYQS 209
Query: 507 -QSVLVSAHTSAGKTVVAEYAIA--LSLKN-----KQRVIYTTPIKALSNQKYREFSE 656
++++VSA T +GKT + E A LS + K +Y P KAL N+K +++ E
Sbjct: 210 DENLVVSAPTGSGKTTIFELAFLHNLSFRTPDDSLKPLAVYIAPTKALCNEKAKDWQE 267
>UniRef50_Q55NJ7 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1528
Score = 39.5 bits (88), Expect = 0.091
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Frame = +3
Query: 339 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDP-FQKEAILCIDNL--- 506
I T+ + E ++ N+ PL+PL+ P+ Q P F D++
Sbjct: 152 ITAETIRSREELRNKAVF--NKNGKPLVPLSRLPIDQRKLFKFPCFNNVQSEVFDDVYQS 209
Query: 507 -QSVLVSAHTSAGKTVVAEYAIA--LSLKN-----KQRVIYTTPIKALSNQKYREFSE 656
++++VSA T +GKT + E A LS + K +Y P KAL N+K +++ E
Sbjct: 210 DENLVVSAPTGSGKTTIFELAFLHNLSFRTPDDSLKPLAVYIAPTKALCNEKAKDWQE 267
>UniRef50_Q6C0Y6 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 2106
Score = 39.1 bits (87), Expect = 0.12
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Frame = +3
Query: 462 LDPFQKEAILC-IDNLQSVLVSAHTSAGKTVVAEYAIALSLK-----------NKQRVIY 605
L+ Q + C ++ ++L+ A T AGKT VA A+ L N +++Y
Sbjct: 453 LNRIQSKVFPCAFESDDNMLICAPTGAGKTNVAFLAMLRCLSHFRAPNGGFRTNDFKMVY 512
Query: 606 TTPIKALSNQKYREFSEEFHDVGLITGDVT 695
P+KAL ++ REFS+ + +GL ++T
Sbjct: 513 IAPLKALVQEQVREFSKRLNSMGLKVSELT 542
>UniRef50_Q8ZY90 Cluster: ATP-dependent, DNA binding helicase; n=4;
Pyrobaculum|Rep: ATP-dependent, DNA binding helicase -
Pyrobaculum aerophilum
Length = 704
Score = 39.1 bits (87), Expect = 0.12
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = +3
Query: 462 LDPFQKEAILC--IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ 635
L P Q EA+ D + +L +A T++GK+++AE A + + +Y P+KAL+ +
Sbjct: 24 LFPPQVEAVKAGIFDGVNLLLCTA-TASGKSLLAEVASVKTALEGKMALYAVPLKALAQE 82
Query: 636 KYREFS--EEFHDVGLITGD 689
K FS + VG+ TGD
Sbjct: 83 KLLHFSYYGKLARVGISTGD 102
>UniRef50_UPI0000E4A360 Cluster: PREDICTED: similar to RNA helicase;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to RNA helicase - Strongylocentrotus purpuratus
Length = 1419
Score = 38.7 bits (86), Expect = 0.16
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 24/144 (16%)
Frame = +3
Query: 336 RIVIHTLETHEGCT--HEVAIPPNQEYAP-----LLPLTT-EPVKQYSF----ILDPFQK 479
RI + TH T EV +PP P L+ +++ +PV Q +F L+ Q
Sbjct: 77 RITVPRGSTHVAKTTYEEVTVPPEDHAPPGVGEELVKISSLDPVGQLAFKGIKTLNRIQS 136
Query: 480 EAI-LCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK-----------NKQRVIYTTPIKA 623
+ +++L+ A T AGKT +A AI ++ N+ +V+Y P+KA
Sbjct: 137 VVFETAYNKSENLLICAPTGAGKTNIAMLAILQEVRKHLDARGAVKHNEFKVVYVAPMKA 196
Query: 624 LSNQKYREFSEEFHDVGLITGDVT 695
L+ + R F +GL ++T
Sbjct: 197 LAAEMTRTFGSRLKPLGLSVRELT 220
>UniRef50_Q6MCM6 Cluster: Putative uncharacterized protein; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 804
Score = 38.7 bits (86), Expect = 0.16
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 468 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSL-----KNKQRVIYTTPIKALSN 632
PFQKEA L +S L+S T AGKT A Y ALS K +++Y TP++AL+
Sbjct: 22 PFQKEAWLKFLEGKSGLISVPTGAGKTYAA-YLSALSKLHEDPKKGIQILYITPLRALAK 80
Query: 633 QKYREFSEEFHDVGLI 680
D+ LI
Sbjct: 81 DLESALKAPIDDLKLI 96
>UniRef50_A0LIY3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Syntrophobacter fumaroxidans MPOB|Rep: DEAD/DEAH
box helicase domain protein - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 973
Score = 38.7 bits (86), Expect = 0.16
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +3
Query: 474 QKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIA--LSLKNKQRVIYTTPIKALSNQKYRE 647
Q EA+ I ++++V+ TS+GK+++ A+ LS ++QR +Y PIKALS +
Sbjct: 58 QTEALEMIRAGRNIVVATPTSSGKSLIYNLAVTEGLSENHEQRALYLFPIKALSRDQLAT 117
Query: 648 FSEEFHDVGLITG 686
E F ++ G
Sbjct: 118 L-ENFFEMSAQAG 129
>UniRef50_Q8SRJ6 Cluster: HFM1-LIKE ATP-DEPENDENT RNA HELICASE; n=1;
Encephalitozoon cuniculi|Rep: HFM1-LIKE ATP-DEPENDENT
RNA HELICASE - Encephalitozoon cuniculi
Length = 1058
Score = 38.7 bits (86), Expect = 0.16
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLIT 683
++LV A T +GKT VA I +LK +V+Y P++AL+ + ++ ++ H V T
Sbjct: 123 NMLVCAPTGSGKTDVALLCILRALKKGDKVVYVVPMRALATEIALKYKKKLGGHRVVEYT 182
Query: 684 GD 689
GD
Sbjct: 183 GD 184
>UniRef50_A3H7W4 Cluster: DEAD/DEAH box helicase-like; n=1;
Caldivirga maquilingensis IC-167|Rep: DEAD/DEAH box
helicase-like - Caldivirga maquilingensis IC-167
Length = 756
Score = 38.7 bits (86), Expect = 0.16
Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +3
Query: 462 LDPFQKEAILC-IDNLQSVLVSAHTSAGKTVVAEYAIALS-LKNKQRVIYTTPIKALSNQ 635
L P Q+EAI + N +++L+ + T++GKT++AE A + L N ++ + P+KAL+ +
Sbjct: 25 LYPPQEEAIRAGLLNGENILMVSATASGKTLLAEVAAVNNVLVNDKKSLVAVPLKALAFE 84
Query: 636 KYREFSEEFHDVGL 677
K +F+ + ++G+
Sbjct: 85 KLNDFN-TYSELGI 97
>UniRef50_UPI00015B5D9F Cluster: PREDICTED: similar to Mus308; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to Mus308 -
Nasonia vitripennis
Length = 2242
Score = 38.3 bits (85), Expect = 0.21
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +3
Query: 417 LLPLTTEPVKQYSF-ILDPFQKEAIL---CIDNLQSVLVSAHTSAGKTVVAEYAIALS-L 581
L PL E K + P+Q E + ++ ++++ SA TSAGKT+VAE+ + + L
Sbjct: 169 LPPLILEKYKARGIKTMFPWQVECLANKKILEENKNLVYSAPTSAGKTLVAEFLMLKTVL 228
Query: 582 KNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
+ K++ I+ P ++ +K F + D G+
Sbjct: 229 ERKKKAIFILPFVSVVREKMFYFQDLLSDSGV 260
>UniRef50_Q4ESI0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Listeria monocytogenes|Rep: DEAD/DEAH box helicase
domain protein - Listeria monocytogenes str. 1/2a F6854
Length = 1108
Score = 38.3 bits (85), Expect = 0.21
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Frame = +3
Query: 279 EEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSF 458
E+ E +++ ++ L R++ T++ T +PP + PL +TT ++
Sbjct: 209 EKLEKISFESNLTLNWLIIRLLKIIFLTYQDVTFWSTLPP---FLPLSSMTTNYIRLLCS 265
Query: 459 ILDPF------QKEAI-LCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTT 611
+ P Q E++ L + N + +V+ TS GKT VAE AI L +V+Y
Sbjct: 266 LKSPITELWPSQTESLPLALGNSKGGVVNLRTSGGKTRVAELAILKMLTENPASKVLYLA 325
Query: 612 PIKALSNQKYREFSEEFHDVGL 677
P ++L+ + + S F + +
Sbjct: 326 PFRSLAFEIEQSLSMIFEPLDI 347
>UniRef50_Q976P4 Cluster: Putative uncharacterized protein ST0147;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST0147 - Sulfolobus tokodaii
Length = 621
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYR 644
++ L+ A T +GKT +A+Y + + K V+YT+P+KALS + YR
Sbjct: 16 KNYLIVAPTGSGKTHIAKYLLN---EEKGIVVYTSPLKALSREVYR 58
>UniRef50_P95949 Cluster: Uncharacterized ATP-dependent helicase
SSO0112; n=11; Archaea|Rep: Uncharacterized
ATP-dependent helicase SSO0112 - Sulfolobus solfataricus
Length = 875
Score = 38.3 bits (85), Expect = 0.21
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Frame = +3
Query: 408 YAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALS--- 578
Y L P + +Q P Q+ AI I +VLVS+ T +GKT+ A I S
Sbjct: 13 YNLLRPYVAKWFRQKYTTFTPPQRAAIPLIKQNYNVLVSSPTGSGKTLAAFLGILDSLFE 72
Query: 579 ------LKNKQRVIYTTPIKALSNQKYREFSEEFHDV 671
L++K IY +P++AL+N R E +++
Sbjct: 73 LGDNNELEDKVYAIYISPLRALNNDMQRNLLEPLNEL 109
>UniRef50_Q2IX13 Cluster: DEAD/DEAH box helicase; n=5;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase -
Rhodopseudomonas palustris (strain HaA2)
Length = 751
Score = 37.9 bits (84), Expect = 0.28
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Frame = +3
Query: 462 LDPFQKEAILC-IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR----VIYTTPIKAL 626
L Q AI+ +D +L++A T+AGKT A I ++ ++ + V+Y +P+KAL
Sbjct: 32 LREIQARAIVAALDGAGDILIAASTAAGKTEAAFLPILTAVADRTQSGFSVLYVSPLKAL 91
Query: 627 SNQKYREFSE--EFHDVGLITGDVTINPSA 710
N ++R E ++ ++ +PSA
Sbjct: 92 INDQFRRLETLCEAMEIPVVKWHGDASPSA 121
>UniRef50_Q9NA34 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 640
Score = 37.9 bits (84), Expect = 0.28
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 114 LFDCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEED 293
L FDE T A Q + + P+LEEL NK+ D Q + +S S P E D
Sbjct: 295 LMQAFDELEPTIAEYQSDLIAGMTAPELEEL----NKQIDCDDQMSQSSDSAPPSEVSSD 350
Query: 294 SELITDINV-DLLQSRIVIHTLETHEGCTHEV 386
EL T +++ D + +V E EGC +
Sbjct: 351 LELDTALDIRDGMTMPLVDLKDEVIEGCVDRI 382
>UniRef50_Q54G57 Cluster: DEAD/DEAH box helicase; n=1; Dictyostelium
discoideum AX4|Rep: DEAD/DEAH box helicase -
Dictyostelium discoideum AX4
Length = 2195
Score = 37.9 bits (84), Expect = 0.28
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Frame = +3
Query: 399 NQEYAPLLPLTTEPVKQYSFI-------LDPFQKEAI--LCIDNLQSVLVSAHTSAGKTV 551
N E L PL E +K F +P Q + L N +VL+ + T +GKT+
Sbjct: 1299 NTELLDLQPLPKEALKNKDFESLFKFSHFNPIQTQVFHTLYYTN-NNVLLGSPTGSGKTI 1357
Query: 552 VAEYAIALSLKNK--QRVIYTTPIKALSNQKYREFSEEFHD-VGL----ITGDVTIN 701
AE A+ +++ +V+Y P+KAL ++ ++ +F + +G +TGD T N
Sbjct: 1358 CAELAMFKVFRDEPHMKVVYIAPLKALVRERMNDWKVKFQEKLGKKLVELTGDYTPN 1414
Score = 37.5 bits (83), Expect = 0.37
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSL-----------KNKQRVIYTTPIKALSNQKYREFS 653
+++L+SA T AGKT +A I + K+ ++IY P+KAL+++ +FS
Sbjct: 499 ENILISAPTGAGKTNIALLTILHEIESNINPYGYLDKDNFKIIYIAPLKALASEMVEKFS 558
Query: 654 EEFHDVGLITGDVT 695
+G+++ ++T
Sbjct: 559 NSLKYLGIVSKELT 572
>UniRef50_Q74ZT5 Cluster: AGR113Wp; n=2; Saccharomycetaceae|Rep:
AGR113Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 2154
Score = 37.9 bits (84), Expect = 0.28
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Frame = +3
Query: 285 EEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTT-EPVKQYSF- 458
E+ S L+T V LL THE H A P + PL+ +++ Q SF
Sbjct: 438 EQGSALLTSTKV-LLPDNSFKRIKSTHEEI-HIPAPPKPVDNFPLVSISSLVDWAQKSFP 495
Query: 459 -----ILDPFQKEAI-LCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK------------ 584
L+ Q E + +++L+ A T AGKT VA AI L
Sbjct: 496 TAETKTLNRIQSEVYPIAFGTDKNMLLCAPTGAGKTNVAVLAILRLLSKYYKAETKSFNT 555
Query: 585 NKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVT 695
+K +V+Y P+KAL ++ REF GL ++T
Sbjct: 556 SKFKVVYIAPLKALVQEQVREFQRRLQQYGLKVAELT 592
>UniRef50_Q6FKF7 Cluster: Similar to sp|P32639 Saccharomyces
cerevisiae YER172c RNA helicase- related protein; n=1;
Candida glabrata|Rep: Similar to sp|P32639 Saccharomyces
cerevisiae YER172c RNA helicase- related protein -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 2140
Score = 37.9 bits (84), Expect = 0.28
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIAL-----------SLK-NKQRVIYTTPIKALSNQKYREF 650
+++L+ A T AGKT VA I SLK N R++Y P+KAL ++ REF
Sbjct: 504 KNLLMCAPTGAGKTNVAVLTILQVLSQYINEDTDSLKLNDFRIVYVAPLKALVQEQVREF 563
Query: 651 SEEFHDVGL----ITGDVTINPS 707
+ G+ +TGD T+ S
Sbjct: 564 ERRLSNFGIKVSELTGDTTLTRS 586
>UniRef50_Q9YFQ8 Cluster: Putative ski2-type helicase; n=1;
Aeropyrum pernix|Rep: Putative ski2-type helicase -
Aeropyrum pernix
Length = 735
Score = 37.9 bits (84), Expect = 0.28
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQ-RVIYTTPIKALSNQKYREFS 653
++ ++++V+A T +GKT +A AI SL R Y P+K+++ +KY FS
Sbjct: 40 VEKGENLVVAAPTGSGKTFIALVAIVNSLARAGGRAFYLVPLKSVAYEKYTSFS 93
>UniRef50_Q8D392 Cluster: Protein grpE; n=2; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Protein grpE - Wigglesworthia glossinidia brevipalpis
Length = 218
Score = 37.9 bits (84), Expect = 0.28
Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 9/183 (4%)
Frame = +3
Query: 168 NVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEED-SELITDINVDLLQSRIV 344
N + + KL + + NK+ + I + KK + + S+ I ++ + +
Sbjct: 5 NSNKINEDKLNKKSEVKNKKEEEIINNKKQTTEKKINLNKNNISDEIIPEKINFNDQKNI 64
Query: 345 IHTLETH----EGCTHEVAIPPNQEYAPLLPLTTEPV-KQYSFILDPFQKEAILCIDNLQ 509
I L+ + + H++ + E L+ T + K Y F L+ F + IDNL+
Sbjct: 65 IENLKKNLSKEKKSKHDLILRNQAEMENLMKRTQANIEKSYKFALEKFSIALLPIIDNLE 124
Query: 510 SV--LVSAHTSAGKTV-VAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLI 680
L+ K + E I L+LK +VI++ IK + ++K F + H+ +
Sbjct: 125 RTKNLLEKENEKNKNINPIEEGINLTLKEFIKVIHSFGIKEI-DKKNIPFDPKIHEAMTV 183
Query: 681 TGD 689
D
Sbjct: 184 IDD 186
>UniRef50_A2E6Q7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 758
Score = 37.5 bits (83), Expect = 0.37
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 147 EAAIQLPNVKNVE-KPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVD 323
E A++L N +N E K +LEEL A K D + A+ S + + EEE+ + I D+
Sbjct: 397 EEALKLRNQRNFEAKKRLEELEAKRAKDLEDQLLLAEARESARQKAEEEERKRIADLRAQ 456
Query: 324 L-LQSRIVIHTLETHE 368
LQ ++ + + +
Sbjct: 457 YQLQQQMQLEKIRREQ 472
>UniRef50_O67837 Cluster: ATP-dependent DNA helicase recG; n=1;
Aquifex aeolicus|Rep: ATP-dependent DNA helicase recG -
Aquifex aeolicus
Length = 792
Score = 37.5 bits (83), Expect = 0.37
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 516 LVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVG----LIT 683
L+ +GKT+VA +K+ +V P + L++Q Y++FSE D G L+T
Sbjct: 385 LLQGDVGSGKTIVAILTSLAVVKSGYQVAVMVPTEILAHQHYKKFSEMLKDYGVNVALLT 444
Query: 684 GDVT 695
G +T
Sbjct: 445 GSLT 448
>UniRef50_O60072 Cluster: Putative helicase mug81; n=1;
Schizosaccharomyces pombe|Rep: Putative helicase mug81 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1935
Score = 37.5 bits (83), Expect = 0.37
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKN--KQRVIYTTPIKALSNQKYREF 650
++ V A T +GKT+ AE A +L N K +V+Y P+KAL ++ +++
Sbjct: 1152 NIFVGAPTGSGKTMAAELATWRALHNYPKSKVVYIAPMKALVKERVKDW 1200
>UniRef50_Q2GSE6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 770
Score = 37.1 bits (82), Expect = 0.49
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 512 CTCVSSHVCWQNSGCRVCHSSITKKQAESNIHNPY*SSFESKI*RVLRGVS*CWFNNW*C 691
CTC+ + W+ SGC VC ++ K E + NPY F S + + + C + W C
Sbjct: 433 CTCLQT---WKGSGCPVCRATNPKPTEEYDSDNPYSQPFGSGVSNICNNCN-CTDDLWIC 488
>UniRef50_Q9UT24 Cluster: Pre-mRNA-splicing factor brr2; n=4;
Eukaryota|Rep: Pre-mRNA-splicing factor brr2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 2176
Score = 37.1 bits (82), Expect = 0.49
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIA--LSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVG 674
SV + A +GKTV AE A+ S ++ +Y PI+ + +++Y E+ +F D+G
Sbjct: 1382 SVFIGAPNGSGKTVCAELALLHHWSQEDYGTAVYIAPIQEIVDRRYEEWYGKFSDLG 1438
>UniRef50_UPI0000DB7978 Cluster: PREDICTED: similar to
mutagen-sensitive 308 CG6019-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mutagen-sensitive
308 CG6019-PA - Apis mellifera
Length = 1530
Score = 36.7 bits (81), Expect = 0.64
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Frame = +3
Query: 315 NVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPL----LPLTTEPVKQYSFILDPFQKE 482
NV+L S I+ E ++I P Q+ L LPL + + F +
Sbjct: 8 NVNLSNSNSSINNTEKTSEINPFISIIPTQDRCKLSSWGLPLNILQKYEAKGVTTMFAWQ 67
Query: 483 AILCIDNLQ------SVLVSAHTSAGKTVVAE-YAIALSLKNKQRVIYTTPIKALSNQKY 641
+ C+ N + +++ SA TSAGKT++AE I L+ +++VI+ P ++ +K
Sbjct: 68 -VECLSNQKVIEKNCNLVYSAPTSAGKTLIAEILMIKTVLERQKKVIFILPFVSVVREKM 126
Query: 642 REFSEEFHDVGL 677
F + D G+
Sbjct: 127 YYFQDLLSDSGV 138
>UniRef50_Q608B8 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=23; cellular organisms|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Methylococcus
capsulatus
Length = 1412
Score = 36.7 bits (81), Expect = 0.64
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Frame = +3
Query: 468 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAI---------ALSLKNKQRVIYTTPIK 620
P Q A + +VLV+A T +GKT+ A A+ L ++ R++Y +P+K
Sbjct: 23 PAQTRAWAAVQGGHNVLVAAPTGSGKTLAAFLAVIDELVREGEVFGLPDETRILYISPLK 82
Query: 621 ALSNQKYR 644
ALSN ++
Sbjct: 83 ALSNDIHK 90
>UniRef50_A5FDX5 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Flavobacterium johnsoniae UW101|Rep: DEAD/DEAH box
helicase domain protein - Flavobacterium johnsoniae
UW101
Length = 1048
Score = 36.7 bits (81), Expect = 0.64
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 495 IDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF 662
+D+ S +++ T AGKT VAE IA ++ + V+Y P AL +Q R+ + F
Sbjct: 300 LDSGCSAVLTFPTGAGKTTVAELKIASTIMAGKSVLYLVPTHALEDQINRDLNTLF 355
>UniRef50_A1SZ94 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Psychromonas ingrahamii 37|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Psychromonas ingrahamii (strain 37)
Length = 828
Score = 36.7 bits (81), Expect = 0.64
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Frame = +3
Query: 381 EVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAE 560
E +P +E + +L + + + + Q E + L + S TS GK+ +
Sbjct: 111 EHPLPYEREVSNILKRDRQKLPFGNEVFTDSQYEVFTSLTELDNFSFSGPTSFGKSFIIR 170
Query: 561 YAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSA--------SC 716
I + NK+ V+ P K L + RE + G G+V ++ +A +
Sbjct: 171 SYIFDCISNKKNVVILVPTKVLIEEYIREIRKTIKVEG--WGNVNLSKNAQSYIEDKINI 228
Query: 717 LIMTTEILRNMLYRGSEI 770
LI+T E N++Y E+
Sbjct: 229 LILTPERFNNLIYTDLEL 246
>UniRef50_Q7QWP8 Cluster: GLP_26_39935_43720; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_26_39935_43720 - Giardia lamblia
ATCC 50803
Length = 1261
Score = 36.7 bits (81), Expect = 0.64
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ------------RVIYTTPIKALSNQKYREF 650
++V++ T +GKT +E AI ++++ +++Y P+KAL ++Y ++
Sbjct: 197 ENVIIGCPTGSGKTTCSELAILQHIRDRYQAKSNEATMVYPKIVYIAPMKALIRERYNDW 256
Query: 651 SEEF-HDVGLITGDVTIN--PSASCLIMTTEIL 740
+E F D+ L ++T P+AS L IL
Sbjct: 257 AESFSKDMNLSVMEITGESLPAASALYRADIIL 289
>UniRef50_Q5TNG3 Cluster: ENSANGP00000028953; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028953 - Anopheles gambiae
str. PEST
Length = 524
Score = 36.7 bits (81), Expect = 0.64
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +3
Query: 486 ILCIDNLQSVLVSAHTSAGKTVVAEYA-IALSLKNKQ---RVIYTTPIKALSNQKYREFS 653
+L DN S++V+A T +GKTV+ E A + LS + K R++Y P ++L +K++++
Sbjct: 35 VLQTDN--SIVVNAPTGSGKTVILELAMLKLSTQAKDAPYRIVYLAPTRSLCAEKFQDWK 92
Query: 654 EEFHDVGL 677
GL
Sbjct: 93 GRLAAHGL 100
>UniRef50_Q8SRQ1 Cluster: PRE-mRNA SPLICING HELICASE; n=1;
Encephalitozoon cuniculi|Rep: PRE-mRNA SPLICING HELICASE
- Encephalitozoon cuniculi
Length = 1481
Score = 36.7 bits (81), Expect = 0.64
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
+VLV A T +GKTV+ +I + K RV Y P+KAL+ + R S F G+
Sbjct: 264 NVLVCAPTGSGKTVIGMMSILREAERRKKMRVGYIVPMKALAREICRTISRWFSGYGI 321
>UniRef50_Q5A0Z8 Cluster: Potential spliceosomal U5 snRNP RNA
helicase; n=1; Candida albicans|Rep: Potential
spliceosomal U5 snRNP RNA helicase - Candida albicans
(Yeast)
Length = 1987
Score = 36.7 bits (81), Expect = 0.64
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKNKQ----------RVIYTTPIKALSNQKYREFSEE 659
++L+ A T AGKT VA I +++N + +++Y P+KAL ++ REF
Sbjct: 391 NLLICAPTGAGKTNVAMLTILRTIENFRNNGHIQLKNFKIVYIAPLKALVQEQMREFQRR 450
Query: 660 FHDV-GLITGDVTINPSAS 713
V G++ ++T + S S
Sbjct: 451 LTSVYGVVVNELTGDSSLS 469
Score = 33.9 bits (74), Expect = 4.5
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKNKQ-RVIYTTPIKALSNQKYREFSEEF 662
+V + + GKTV+AE AI NK+ R++Y P + L ++ ++++S F
Sbjct: 1224 NVFIGSSKGDGKTVLAELAILNHWNNKKGRIVYINPCQELVDKLFKKWSTFF 1275
>UniRef50_Q977E4 Cluster: Putative uncharacterized protein ST0003;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST0003 - Sulfolobus tokodaii
Length = 949
Score = 36.7 bits (81), Expect = 0.64
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +3
Query: 399 NQEYAPLLP-LTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV-AEYAIA 572
N ++ +LP L + V+ + Q EAI + ++++V+A T GKT + YA+
Sbjct: 30 NVKFRDVLPTLCSRNVRLCDLNMYQHQLEAINKLMQGKNLVVNAETGGGKTEIWVSYALE 89
Query: 573 LSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVG 674
+ LK + V+ P KAL+ + + + + G
Sbjct: 90 MQLKGEFNVLAIYPTKALAGDQIERIVKYYIEAG 123
>UniRef50_P53327 Cluster: Antiviral helicase SLH1; n=11;
Saccharomycetales|Rep: Antiviral helicase SLH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1967
Score = 36.7 bits (81), Expect = 0.64
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 465 DPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAIALSLKN--KQRVIYTTPIKALSNQ 635
+P Q + N ++ V + T +GKT+VAE AI + K ++++Y P+KAL +
Sbjct: 1141 NPMQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIWHAFKTFPGKKIVYIAPMKALVRE 1200
Query: 636 KYREFSEEFHDVGLITGDVTINPSASCL 719
+ ++ ++ + +TGD + + L
Sbjct: 1201 RVDDWRKK---ITPVTGDKVVELTGDSL 1225
>UniRef50_UPI0000DAE42A Cluster: hypothetical protein
Rgryl_01000298; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000298 - Rickettsiella
grylli
Length = 721
Score = 36.3 bits (80), Expect = 0.85
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 516 LVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREF 650
L+ +GKT+VA +A L++ N +V P + LS Q Y+ F
Sbjct: 322 LLQGDVGSGKTIVAAFAALLAIANHYQVALMAPTELLSEQHYQHF 366
>UniRef50_Q0F085 Cluster: Transcription-repair coupling factor; n=1;
Mariprofundus ferrooxydans PV-1|Rep:
Transcription-repair coupling factor - Mariprofundus
ferrooxydans PV-1
Length = 1109
Score = 36.3 bits (80), Expect = 0.85
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 6/111 (5%)
Frame = +3
Query: 348 HTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAI------LCIDNLQ 509
H L E + PP PLL E ++ F Q +AI L +D
Sbjct: 532 HELIDIEAARTSASRPPCLLQGPLLDAYEEFAARFPFEETDDQAQAIDAVLTDLALDKPM 591
Query: 510 SVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF 662
++ GKT VA A + ++ ++V P L+NQ Y F+E F
Sbjct: 592 DRVICGDVGFGKTEVAMRAAFVVAESGRQVAVLAPTTVLANQHYASFAERF 642
>UniRef50_Q5D892 Cluster: Meiotic recombination protein MER3; n=3;
Magnoliophyta|Rep: Meiotic recombination protein MER3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1133
Score = 36.3 bits (80), Expect = 0.85
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 17/84 (20%)
Frame = +3
Query: 489 LCIDNLQSVLVSAHTSAGKTVVAEYAIA-------------LSLKNKQRVIYTTPIKALS 629
LC + ++++SA T +GKTV+ E I L K + +Y +P KAL
Sbjct: 35 LCFHSDINMIISAPTGSGKTVLFELCILRLFSKSISKEGSFLHAKGALKTVYISPSKALV 94
Query: 630 NQKYREFSEEFHDVGL----ITGD 689
+K R+++++F+ G+ +TGD
Sbjct: 95 QEKLRDWNQKFNSWGISCLELTGD 118
>UniRef50_A5K861 Cluster: Hsp70 interacting protein, putative; n=6;
Plasmodium|Rep: Hsp70 interacting protein, putative -
Plasmodium vivax
Length = 271
Score = 36.3 bits (80), Expect = 0.85
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +3
Query: 159 QLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLLQSR 338
+LP K + + + T+ G K + + DT ++ + ED+E + ++ + L+ +
Sbjct: 15 KLPPPKGLSRAATRKFTSEGKKIWYSGPK--DTYINSGFELKNEDTEKLIELLKESLKLK 72
Query: 339 IVIHTLETHEGCTH--EVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQS 512
++ T + + H E+AI ++ L +K + F + +I+C N+Q+
Sbjct: 73 LLSCTYCSEDIAKHYLELAIMEHKNLL-LNDSKNHYLKSFEIYKKIFGELSIMCA-NIQT 130
Query: 513 VLVSAHTSAGKTVVAEYAIALSLKNKQRVI 602
L H G AE + LSL NK+ +I
Sbjct: 131 YLGVVHKDLGDLKKAEEFLQLSLANKRLII 160
>UniRef50_A5E7Q8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 2016
Score = 36.3 bits (80), Expect = 0.85
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ----------RVIYTTPIKALSNQKYREFSE 656
+++L+ A T AGKT VA + ++ N + +++Y P+KAL ++ REF
Sbjct: 389 ENLLICAPTGAGKTNVAMLTMLRAISNHRFNDAINKDQFKIVYIAPLKALVLEQVREFQR 448
Query: 657 EFHDV-GLITGDVTINPSAS 713
V GL+ ++T + S S
Sbjct: 449 RLTPVFGLVVNELTGDASLS 468
>UniRef50_A0B8I7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Methanosaeta thermophila PT|Rep: DEAD/DEAH box
helicase domain protein - Methanosaeta thermophila
(strain DSM 6194 / PT) (Methanothrixthermophila (strain
DSM 6194 / PT))
Length = 820
Score = 36.3 bits (80), Expect = 0.85
Identities = 18/60 (30%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYA-IALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLIT 683
+S+LV + T+ GK+++ E A I ++ + ++++ P+ AL+NQK+ + S + ++G T
Sbjct: 226 KSLLVVSATATGKSLIGEIAGIKNLIEGRGKLLFLVPLVALANQKFEQLS-AYSELGFRT 284
>UniRef50_Q6ZM94 Cluster: Novel protein similar to humna
DNA-directed polymerase theta; n=2; Danio rerio|Rep:
Novel protein similar to humna DNA-directed polymerase
theta - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 2254
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALS-LKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
Q+++ SA TSAGKT+V+E I L+ +Q+ ++ P +++ +K F + G+
Sbjct: 55 QNLVYSAPTSAGKTLVSELLILKRVLETRQKAMFILPFVSVAREKMFYLQNVFQEAGI 112
>UniRef50_Q7TQC0 Cluster: DNA polymerase Q; n=17; Tetrapoda|Rep: DNA
polymerase Q - Mus musculus (Mouse)
Length = 2587
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALS-LKNKQRVIYTTPIKALSNQKYREFSEEFHDVGL 677
++++ SA TSAGKT+VAE I L+ +++ ++ P +++ +K F +VGL
Sbjct: 151 KNLVYSAPTSAGKTLVAELLILKRVLETRKKALFILPFVSVAKEKKCYLQSLFQEVGL 208
>UniRef50_Q4XQZ9 Cluster: DNA-directed DNA polymerase, putative;
n=6; Plasmodium (Vinckeia)|Rep: DNA-directed DNA
polymerase, putative - Plasmodium chabaudi
Length = 988
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSE 656
++ L A TS GKT+VAE +K +++ + P+ +L N+K F +
Sbjct: 91 ENFLFVAQTSGGKTLVAEIFAFEEIKKTEKIFFLFPLNSLINEKLEYFKK 140
>UniRef50_Q4WA08 Cluster: DEAD/DEAH box helicase, putative; n=18;
Ascomycota|Rep: DEAD/DEAH box helicase, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 2043
Score = 35.9 bits (79), Expect = 1.1
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Frame = +3
Query: 423 PLTTEPVKQYSFILDPFQKEAI-LCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNK--Q 593
P+ E Q +P Q + L +VL+ + T +GKTV E A+ + + K
Sbjct: 1170 PILEELYGQRFQFFNPMQTQIFHLLYHTSANVLLGSPTGSGKTVACELAMWWAFREKPGS 1229
Query: 594 RVIYTTPIKALSNQKYREFSEEF-HDVGL----ITGDVT 695
+V+Y P+KAL ++ ++ + +GL +TGD T
Sbjct: 1230 KVVYIAPMKALVRERVMDWGKRLAAPMGLKLVELTGDNT 1268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,562,086
Number of Sequences: 1657284
Number of extensions: 13581346
Number of successful extensions: 38924
Number of sequences better than 10.0: 316
Number of HSP's better than 10.0 without gapping: 36990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38772
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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