Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H24
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.7  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +3

Query: 126 FDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRA 230
           ++  P   + +QLP V  +++ + +       KRA
Sbjct: 57  YNAPPYMSSVLQLPTVTEIQETQPQRTKPTAGKRA 91


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 131 IKTVKQTIYVRHFKQVTLQIFNIDLYIPFINLS 33
           +KT   T     F +   + FNI L  PF N +
Sbjct: 395 LKTTMSTFSDITFMRTVWKFFNIFLITPFYNFN 427


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +3

Query: 126 FDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRA 230
           ++  P   + +QLP V  +++ + +       KRA
Sbjct: 48  YNAPPYMSSVLQLPTVTEIQETQPQRTKPTAGKRA 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,207
Number of Sequences: 336
Number of extensions: 3772
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)