Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H24
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.5  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    24   6.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.9  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 554 CRVCHSSITKKQAESNIHNP 613
           C  CH +++ +   +NIH P
Sbjct: 901 CVSCHKTVSNRWHHANIHRP 920


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 210 AAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLL 329
           A G K+ HDD+      V K   E  E  +++ +  +DLL
Sbjct: 234 ALGMKQLHDDVSGFFMRVVKDTVEYREREQIVRNDFMDLL 273


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -1

Query: 237 HHVHAYFQQQSTLPILVFQHF*HLAAE 157
           HH+     Q+  LP+++ QH+ +L ++
Sbjct: 149 HHIKQVRSQKPLLPMILDQHYINLKSQ 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,555
Number of Sequences: 2352
Number of extensions: 13515
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)