Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H24
(774 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145638-1|AAD38613.1| 1055|Drosophila melanogaster l.2.35Df pro... 246 3e-65
AE014134-2631|AAF53481.1| 1055|Drosophila melanogaster CG4152-PA... 246 3e-65
AY061315-1|AAL28863.1| 1197|Drosophila melanogaster LD23303p pro... 154 1e-37
AJ276896-1|CAC35050.1| 1197|Drosophila melanogaster putative hel... 154 1e-37
AE014297-3389|AAF56187.2| 1197|Drosophila melanogaster CG10210-P... 154 1e-37
AY051531-1|AAK92955.1| 774|Drosophila melanogaster GH18520p pro... 58 1e-08
AE014297-2053|AAF55204.2| 2183|Drosophila melanogaster CG5205-PA... 58 1e-08
AY061330-1|AAL28878.1| 894|Drosophila melanogaster LD25692p pro... 33 0.33
AE014134-3048|AAF53766.1| 894|Drosophila melanogaster CG10689-P... 33 0.33
BT016121-1|AAV37006.1| 2142|Drosophila melanogaster LD03265p pro... 32 1.0
AY069270-1|AAL39415.1| 847|Drosophila melanogaster GM09620p pro... 32 1.0
AE014296-2600|AAF49564.4| 2142|Drosophila melanogaster CG5931-PA... 32 1.0
BT022823-1|AAY55239.1| 475|Drosophila melanogaster IP13250p pro... 31 2.3
AE014298-563|AAF45897.1| 649|Drosophila melanogaster CG2901-PA ... 31 2.3
U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein. 30 4.1
AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB... 30 4.1
BT001742-1|AAN71497.1| 449|Drosophila melanogaster RE73786p pro... 29 5.4
AE014297-1045|AAF54454.1| 274|Drosophila melanogaster CG12945-P... 29 5.4
>AF145638-1|AAD38613.1| 1055|Drosophila melanogaster l.2.35Df
protein.
Length = 1055
Score = 246 bits (601), Expect = 3e-65
Identities = 126/211 (59%), Positives = 150/211 (71%), Gaps = 1/211 (0%)
Frame = +3
Query: 144 TEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITD-INV 320
T A+ + + K E ++T KR + +E + I D +
Sbjct: 45 TTASKEATSSKGAEGDDKGDVTEEPTKRLKQEASTVAVDDDNNADDEPTRTLDIDDSATL 104
Query: 321 DLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCID 500
+ L++RIV H L+ + CTHEVA P+QEY PL P + P K+Y F+LDPFQ++AILCID
Sbjct: 105 EALRTRIVTHLLDAPKSCTHEVAAHPDQEYIPLKPFSGVPAKEYPFVLDPFQRQAILCID 164
Query: 501 NLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLI 680
N QSVLVSAHTSAGKTVVAEYAIA SL KQRVIYTTPIKALSNQK+REF++EF DVGL+
Sbjct: 165 NSQSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLV 224
Query: 681 TGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
TGDVTINPSASCLIMTTEILRNMLYRGSEIM
Sbjct: 225 TGDVTINPSASCLIMTTEILRNMLYRGSEIM 255
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 102 DINSLFDCFDE-TPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPR 278
DI LFDCFDE TP ++ P + EKP + GNKR D + + S K
Sbjct: 2 DIEELFDCFDEVTP----SVPPPALNQEEKPSGSSASKKGNKRQADGTTASKEATSSKGA 57
Query: 279 EEEEDSEL 302
E ++ ++
Sbjct: 58 EGDDKGDV 65
>AE014134-2631|AAF53481.1| 1055|Drosophila melanogaster CG4152-PA
protein.
Length = 1055
Score = 246 bits (601), Expect = 3e-65
Identities = 126/211 (59%), Positives = 150/211 (71%), Gaps = 1/211 (0%)
Frame = +3
Query: 144 TEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITD-INV 320
T A+ + + K E ++T KR + +E + I D +
Sbjct: 45 TTASKEATSSKGAEGDDKGDVTEEPTKRLKQEASTVAVDDDNNADDEPTRTLDIDDSATL 104
Query: 321 DLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCID 500
+ L++RIV H L+ + CTHEVA P+QEY PL P + P K+Y F+LDPFQ++AILCID
Sbjct: 105 EALRTRIVTHLLDAPKSCTHEVAAHPDQEYIPLKPFSGVPAKEYPFVLDPFQRQAILCID 164
Query: 501 NLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLI 680
N QSVLVSAHTSAGKTVVAEYAIA SL KQRVIYTTPIKALSNQK+REF++EF DVGL+
Sbjct: 165 NSQSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLV 224
Query: 681 TGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
TGDVTINPSASCLIMTTEILRNMLYRGSEIM
Sbjct: 225 TGDVTINPSASCLIMTTEILRNMLYRGSEIM 255
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 102 DINSLFDCFDE-TPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPR 278
DI LFDCFDE TP ++ P + EKP + GNKR D + + S K
Sbjct: 2 DIEELFDCFDEVTP----SVPPPALNQEEKPSGSSASKKGNKRQADGTTASKEATSSKGA 57
Query: 279 EEEEDSEL 302
E ++ ++
Sbjct: 58 EGDDKGDV 65
>AY061315-1|AAL28863.1| 1197|Drosophila melanogaster LD23303p
protein.
Length = 1197
Score = 154 bits (373), Expect = 1e-37
Identities = 75/111 (67%), Positives = 90/111 (81%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPI 617
P + F LD FQK+AIL ++ Q V V+AHTSAGKTVVAEYAIALS ++ R IYT+PI
Sbjct: 255 PAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPI 314
Query: 618 KALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
KALSNQKYR+F + F DVGLITGD+ I P+ASCLIMTTEILR+MLY GS++
Sbjct: 315 KALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDV 365
>AJ276896-1|CAC35050.1| 1197|Drosophila melanogaster putative
helicase Ski2 protein.
Length = 1197
Score = 154 bits (373), Expect = 1e-37
Identities = 75/111 (67%), Positives = 90/111 (81%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPI 617
P + F LD FQK+AIL ++ Q V V+AHTSAGKTVVAEYAIALS ++ R IYT+PI
Sbjct: 255 PAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPI 314
Query: 618 KALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
KALSNQKYR+F + F DVGLITGD+ I P+ASCLIMTTEILR+MLY GS++
Sbjct: 315 KALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDV 365
>AE014297-3389|AAF56187.2| 1197|Drosophila melanogaster CG10210-PA
protein.
Length = 1197
Score = 154 bits (373), Expect = 1e-37
Identities = 75/111 (67%), Positives = 90/111 (81%)
Frame = +3
Query: 438 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPI 617
P + F LD FQK+AIL ++ Q V V+AHTSAGKTVVAEYAIALS ++ R IYT+PI
Sbjct: 255 PAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPI 314
Query: 618 KALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEI 770
KALSNQKYR+F + F DVGLITGD+ I P+ASCLIMTTEILR+MLY GS++
Sbjct: 315 KALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDV 365
>AY051531-1|AAK92955.1| 774|Drosophila melanogaster GH18520p
protein.
Length = 774
Score = 58.0 bits (134), Expect = 1e-08
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 19/132 (14%)
Frame = +3
Query: 393 PPNQEYAPLLPLTTEPVKQ------YSFI-LDPFQKEAILCIDNLQS-VLVSAHTSAGKT 548
PP E PL PL +K Y F +P Q + C+ + + VL+ A T +GKT
Sbjct: 219 PPLTELLPLRPLPVSCLKNVVYESLYKFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKT 278
Query: 549 VVAEYAI--ALSLKNKQRVIYTTPIKALSNQKYREFSEEFH--DVGL----ITGDVTINP 704
+VAE AI AL+ K +V+Y P+KAL ++ ++ + F +GL +TGDVT +
Sbjct: 279 IVAEIAIFRALNQNPKCKVVYIAPLKALVKERIADWEQRFQRSSLGLKVVELTGDVTPDI 338
Query: 705 SA---SCLIMTT 731
A S LI+TT
Sbjct: 339 QAIRESQLIVTT 350
>AE014297-2053|AAF55204.2| 2183|Drosophila melanogaster CG5205-PA
protein.
Length = 2183
Score = 58.0 bits (134), Expect = 1e-08
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 19/132 (14%)
Frame = +3
Query: 393 PPNQEYAPLLPLTTEPVKQ------YSFI-LDPFQKEAILCIDNLQS-VLVSAHTSAGKT 548
PP E PL PL +K Y F +P Q + C+ + + VL+ A T +GKT
Sbjct: 1307 PPLTELLPLRPLPVSCLKNVVYESLYKFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKT 1366
Query: 549 VVAEYAI--ALSLKNKQRVIYTTPIKALSNQKYREFSEEFH--DVGL----ITGDVTINP 704
+VAE AI AL+ K +V+Y P+KAL ++ ++ + F +GL +TGDVT +
Sbjct: 1367 IVAEIAIFRALNQNPKCKVVYIAPLKALVKERIADWEQRFQRSSLGLKVVELTGDVTPDI 1426
Query: 705 SA---SCLIMTT 731
A S LI+TT
Sbjct: 1427 QAIRESQLIVTT 1438
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 17/92 (18%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLK----------NKQRVIYTTPIKALSNQKYREFSE 656
+++LV A T AGKT VA +I +++ ++ +++Y P+KAL+ + FS+
Sbjct: 503 ENMLVCAPTGAGKTNVAMLSIVHTIRCHLEQGVINRDEFKIVYIAPMKALAAEMVDNFSK 562
Query: 657 EFHDVGL----ITGDVTINP---SASCLIMTT 731
+ + +TGD+ + +A+ +++TT
Sbjct: 563 RLKSLQIAVRELTGDIQLTKAEMAATQILVTT 594
>AY061330-1|AAL28878.1| 894|Drosophila melanogaster LD25692p
protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.33
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +3
Query: 270 KPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 449
K + EE+ EL+ D +D +Q+ + + E E+ + LT + ++
Sbjct: 197 KDAKAEEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKR------LTLDETRR 250
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTV-VAEYAIALSL-KNKQRVIYTTPIKA 623
S + PF+++ I + Q +++ T +GKT V +Y + K+K+ + T P +
Sbjct: 251 -SLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRV 309
Query: 624 LSNQKYREFSEE 659
+ +EE
Sbjct: 310 AAMSVAARVAEE 321
>AE014134-3048|AAF53766.1| 894|Drosophila melanogaster CG10689-PA
protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.33
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +3
Query: 270 KPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 449
K + EE+ EL+ D +D +Q+ + + E E+ + LT + ++
Sbjct: 197 KDAKAEEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKR------LTLDETRR 250
Query: 450 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTV-VAEYAIALSL-KNKQRVIYTTPIKA 623
S + PF+++ I + Q +++ T +GKT V +Y + K+K+ + T P +
Sbjct: 251 -SLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRV 309
Query: 624 LSNQKYREFSEE 659
+ +EE
Sbjct: 310 AAMSVAARVAEE 321
>BT016121-1|AAV37006.1| 2142|Drosophila melanogaster LD03265p protein.
Length = 2142
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 465 DPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQ 635
+P Q + + N ++V V A T +GK +AE+AI + ++ R +Y +AL++
Sbjct: 1329 NPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFTTQSDARCVYLVSEEALADL 1388
Query: 636 KYREFSEEF 662
+ ++ +F
Sbjct: 1389 VFADWHSKF 1397
Score = 31.1 bits (67), Expect = 1.8
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Frame = +3
Query: 357 ETHEGCTHEVAIPPNQEYAPL--LPLTTEPVKQYSFILDPFQKEAI-LCIDNLQSVLVSA 527
E H V N+E P+ LP +PV + L+ Q +D+ +++L+ A
Sbjct: 444 EVHVPALKPVPFDANEELQPVDKLPKYVQPVFEGFKTLNRIQSRLYKAALDSDENMLLCA 503
Query: 528 HTSAGKTVVAEYAIALSLK---------NKQ--RVIYTTPIKALSNQKYREFSEEFHDVG 674
T AGKT VA + + N Q ++IY P+K+L + F
Sbjct: 504 PTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSLVQEMVGNFGRRLACYN 563
Query: 675 LITGDVT 695
L ++T
Sbjct: 564 LTVSELT 570
>AY069270-1|AAL39415.1| 847|Drosophila melanogaster GM09620p
protein.
Length = 847
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 465 DPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQ 635
+P Q + + N ++V V A T +GK +AE+AI + ++ R +Y +AL++
Sbjct: 34 NPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFTTQSDARCVYLVSEEALADL 93
Query: 636 KYREFSEEF 662
+ ++ +F
Sbjct: 94 VFADWHSKF 102
>AE014296-2600|AAF49564.4| 2142|Drosophila melanogaster CG5931-PA
protein.
Length = 2142
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 465 DPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAI--ALSLKNKQRVIYTTPIKALSNQ 635
+P Q + + N ++V V A T +GK +AE+AI + ++ R +Y +AL++
Sbjct: 1329 NPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFTTQSDARCVYLVSEEALADL 1388
Query: 636 KYREFSEEF 662
+ ++ +F
Sbjct: 1389 VFADWHSKF 1397
Score = 31.1 bits (67), Expect = 1.8
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Frame = +3
Query: 357 ETHEGCTHEVAIPPNQEYAPL--LPLTTEPVKQYSFILDPFQKEAI-LCIDNLQSVLVSA 527
E H V N+E P+ LP +PV + L+ Q +D+ +++L+ A
Sbjct: 444 EVHVPALKPVPFDANEELQPVDKLPKYVQPVFEGFKTLNRIQSRLYKAALDSDENMLLCA 503
Query: 528 HTSAGKTVVAEYAIALSLK---------NKQ--RVIYTTPIKALSNQKYREFSEEFHDVG 674
T AGKT VA + + N Q ++IY P+K+L + F
Sbjct: 504 PTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSLVQEMVGNFGRRLACYN 563
Query: 675 LITGDVT 695
L ++T
Sbjct: 564 LTVSELT 570
>BT022823-1|AAY55239.1| 475|Drosophila melanogaster IP13250p
protein.
Length = 475
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 66 IENLQSYLFKMS-DINSLFDCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDI 242
+EN S L ++ + + F+ET +TE +L V N LE+L A K H +
Sbjct: 234 VENAPSPLTSSDYEVQAYYKAFEETFLTECQSELTGVNNF---FLEKLLEARRKHGHLKL 290
Query: 243 QYADTSVSKKPREEEEDSEL 302
Q + S++P DS L
Sbjct: 291 QL--LAYSREPGHTGSDSSL 308
>AE014298-563|AAF45897.1| 649|Drosophila melanogaster CG2901-PA
protein.
Length = 649
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 66 IENLQSYLFKMS-DINSLFDCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDI 242
+EN S L ++ + + F+ET +TE +L V N LE+L A K H +
Sbjct: 33 VENAPSPLTSSDYEVQAYYKAFEETFLTECQSELTGVNNF---FLEKLLEARRKHGHLKL 89
Query: 243 QYADTSVSKKPREEEEDSEL 302
Q + S++P DS L
Sbjct: 90 QL--LAYSREPGHTGSDSSL 107
>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
Length = 1547
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +3
Query: 105 INSLFDCFDETP----ITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKK 272
IN + +DETP + ++ L N N+ TAAG ++ ++ T + KK
Sbjct: 762 INRILGLYDETPSLSSVADSTSSLSNNSNIT-------TAAGKRKGSNNNDNRSTKIKKK 814
Query: 273 PREEEEDSELITDINVDLLQSR 338
R + D N D+ ++R
Sbjct: 815 KRSGSWECSDSEDENTDMKRNR 836
>AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB,
isoform B protein.
Length = 1547
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +3
Query: 105 INSLFDCFDETP----ITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKK 272
IN + +DETP + ++ L N N+ TAAG ++ ++ T + KK
Sbjct: 762 INRILGLYDETPSLSSVADSTSSLSNNSNIT-------TAAGKRKGSNNNDNRSTKIKKK 814
Query: 273 PREEEEDSELITDINVDLLQSR 338
R + D N D+ ++R
Sbjct: 815 KRSGSWECSDSEDENTDMKRNR 836
>BT001742-1|AAN71497.1| 449|Drosophila melanogaster RE73786p
protein.
Length = 449
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 168 NVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDS 296
NV+NV K L+ + + ++ Q A T+ SKK +E DS
Sbjct: 377 NVRNVPKESLQRIPDVSGVQELEEKQEAPTTPSKKENLDESDS 419
>AE014297-1045|AAF54454.1| 274|Drosophila melanogaster CG12945-PA
protein.
Length = 274
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 168 NVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDS 296
NV+NV K L+ + + ++ Q A T+ SKK +E DS
Sbjct: 202 NVRNVPKESLQRIPDVSGVQELEEKQEAPTTPSKKENLDESDS 244
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,780,825
Number of Sequences: 53049
Number of extensions: 644091
Number of successful extensions: 2131
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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