Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H24
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 231 4e-61
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 158 5e-39
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 50 2e-06
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 45 7e-05
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 41 9e-04
AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical... 38 0.008
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 31 0.69
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 31 0.69
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 30 1.6
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 30 1.6
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 29 3.7
U39677-1|AAC47961.2| 457|Caenorhabditis elegans Hypothetical pr... 28 6.4
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 28 8.5
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 28 8.5
AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 231 bits (565), Expect = 4e-61
Identities = 129/233 (55%), Positives = 161/233 (69%), Gaps = 15/233 (6%)
Frame = +3
Query: 120 DCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRA-----------HDDIQYA--DTS 260
D FDE ++ +V+ + +E+L +A ++A H+D+ D +
Sbjct: 3 DLFDEFIEPGVKNEIMDVEEAPENPMEKLDSAKKRQAREDMTNLLANMHNDVGVGNFDEA 62
Query: 261 VSKKPREEEEDSELITDINVDLLQSRIVIHTLET-HEGCTHEVAIPPNQEYAPLLPLT-T 434
SK+ R EEE+ + + ++ I++HT+ T +E CTHEVAIPPN E+A L + T
Sbjct: 63 TSKRARVEEEEE--VEEARME----NIIVHTIRTDNENCTHEVAIPPNAEFAELRENSGT 116
Query: 435 EPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTP 614
EP K Y F LD FQK+AILCIDN QSVLVSAHTSAGKTVVA YAIA L+ KQRVIYT+P
Sbjct: 117 EPAKYYPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSP 176
Query: 615 IKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIM 773
IKALSNQKYRE EEF DVGL+TGDVT+NP ASCL+MTTEILR+MLYRGSEIM
Sbjct: 177 IKALSNQKYRELEEEFKDVGLMTGDVTLNPDASCLVMTTEILRSMLYRGSEIM 229
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
protein F01G4.3 protein.
Length = 1266
Score = 158 bits (383), Expect = 5e-39
Identities = 73/123 (59%), Positives = 98/123 (79%)
Frame = +3
Query: 405 EYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 584
EY L+P ++Y F LDPFQ+ ++LC++ +S+ V+AHTSAGKTVVAEYAIAL
Sbjct: 277 EYKRLVPTMA---RKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQA 333
Query: 585 NKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGS 764
+K R +YT+PIKALSNQK+R+F + F DVGL+TGD+ ++P A+CLIMTTEILR+MLY GS
Sbjct: 334 HKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGS 393
Query: 765 EIM 773
E++
Sbjct: 394 EVI 396
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Frame = +3
Query: 450 YSF-ILDPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTTPI 617
Y+F +P Q + C+ +S L+ A T +GKT+ AE A+ L++ +V+Y P+
Sbjct: 956 YNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPL 1015
Query: 618 KALSNQKYREFSEEFHD-----VGLITGDVTINP---SASCLIMTT 731
K+L ++ ++ ++F D V ++GDVT +P +AS +++TT
Sbjct: 1016 KSLVRERVDDWKKKFEDGMGYRVVEVSGDVTPDPEELAASSILITT 1061
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Frame = +3
Query: 507 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ-----------RVIYTTPIKALSNQKYREFS 653
+++L+ A T AGKT +A I ++ Q ++IY P+KAL+ + F
Sbjct: 109 ENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFG 168
Query: 654 EEFHDVGL----ITGDVTIN 701
+ +GL +TGD ++
Sbjct: 169 KRLAPLGLKVKELTGDTQLS 188
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +3
Query: 417 LLPLTTEPVKQ---YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 587
L+ + ++P K F D +Q++ + +D S L+ A TSAGKT V+ Y I L++
Sbjct: 767 LIDIQSDPKKDDRVSGFAPDGWQRKMLDSVDRGNSALIIAPTSAGKTFVSYYCIEKVLRS 826
Query: 588 KQR--VIYTTPIKALSNQ 635
V+Y P KAL NQ
Sbjct: 827 SDNDVVVYVAPSKALINQ 844
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 41.1 bits (92), Expect = 9e-04
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Frame = +3
Query: 393 PPNQEYAPLLPLTTEPVKQYSF----------ILDPFQKEAILCI-DNLQSVLVSAHTSA 539
PP E L PL V F + +P Q + + ++ ++V+V A +
Sbjct: 1289 PPPTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCAPNGS 1348
Query: 540 GKTVVAEYAIALSLKN--KQRVIYTTPIKALSNQKYREFSEEF-----HDVGLITGDVTI 698
GKT +AE A+ +N + + +Y TP++ ++ + Y ++ H + L+TG+ T+
Sbjct: 1349 GKTAIAELAVLRHFENTPEAKAVYITPMEDMATKVYADWKRRLEPAIGHTIVLLTGEQTM 1408
Query: 699 N 701
+
Sbjct: 1409 D 1409
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Frame = +3
Query: 489 LCIDNLQS---VLVSAHTSAGKTVVAEYAIALSLKN-----------KQRVIYTTPIKAL 626
LC L+S +L+ A T AGKT VA + + N + +++Y P+K+L
Sbjct: 482 LCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKSL 541
Query: 627 SNQKYREFSEEFHDVGLITGDVT 695
+ FS+ G+ G++T
Sbjct: 542 VQEMVGSFSKRLAPFGITVGEMT 564
>AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical
protein Y73F8A.25a protein.
Length = 640
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 114 LFDCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEEED 293
L FDE T A Q + + P+LEEL NK+ D Q + +S S P E D
Sbjct: 295 LMQAFDELEPTIAEYQSDLIAGMTAPELEEL----NKQIDCDDQMSQSSDSAPPSEVSSD 350
Query: 294 SELITDINV-DLLQSRIVIHTLETHEGCTHEV 386
EL T +++ D + +V E EGC +
Sbjct: 351 LELDTALDIRDGMTMPLVDLKDEVIEGCVDRI 382
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 468 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYRE 647
P Q++ I CI + + V+ + T +GKT A + I + K K+R TT I+AL RE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKT--AAFVIPMLQKLKRR--DTTGIRALMVSPTRE 104
Query: 648 FS 653
+
Sbjct: 105 LA 106
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 468 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYRE 647
P Q++ I CI + + V+ + T +GKT A + I + K K+R TT I+AL RE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKT--AAFVIPMLQKLKRR--DTTGIRALMVSPTRE 104
Query: 648 FS 653
+
Sbjct: 105 LA 106
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 321 DLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 449
D+ + ++ + + + +G T VA P ++YAP +PL P +Q
Sbjct: 130 DIGERQVTVIEIASQKGSTKRVA--PRKDYAPSIPLPEHPAQQ 170
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 321 DLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 449
D+ + ++ + + + +G T VA P ++YAP +PL P +Q
Sbjct: 130 DIGERQVTVIEIASQKGSTKRVA--PRKDYAPSIPLPEHPAQQ 170
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 597 VIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASC 716
V+ + P+K+ + RE + H V +ITGD NP +C
Sbjct: 672 VVISCPLKSDTKTMIREIMDSSHVVAMITGD---NPLTAC 708
>U39677-1|AAC47961.2| 457|Caenorhabditis elegans Hypothetical
protein C16E9.2a protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3
Query: 120 DCFDETPITEAAIQLPNVKNVE----KPKLEELTAAGNKRAHDDIQYADTSVSKKPREEE 287
+C ETP+TE I + VE K ++ E AG R A S S + R +
Sbjct: 305 NCGYETPLTENPIDFSELAGVEQSLGKRRMSETNLAGGTRMFPSRSIATPSHSSRGRRWQ 364
Query: 288 EDSELI 305
+++ +
Sbjct: 365 SEADTV 370
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 495 IDNLQSVLVSAHTSAGKTV-VAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF 662
IDN Q ++V T +GKT + +YAI L + ++ T P + + + +EE+
Sbjct: 554 IDN-QILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEY 609
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 495 IDNLQSVLVSAHTSAGKTV-VAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF 662
IDN Q ++V T +GKT + +YAI L + ++ T P + + + +EE+
Sbjct: 554 IDN-QILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEY 609
>AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical
protein C44E4.7 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 108 NSLFDCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKPREEE 287
NS++ + P LP ++NV + + E L N D+++ A V ++ +E +
Sbjct: 864 NSMYSLRGQLPEKNGDKTLPKIRNVFEHRFENL----NSNCCDELKSALNDVQEEFKEVQ 919
Query: 288 EDSELITD 311
+D E I +
Sbjct: 920 DDLEQILE 927
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,899,510
Number of Sequences: 27780
Number of extensions: 350789
Number of successful extensions: 992
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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