Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H23
         (833 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.56 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.56 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   6.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.1  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 743 GNKLLNYQYKYRRTGQLIRQGLGPTILL*IPQP 645
           G  +LN  +KY+ T  L+R G  P  ++  P P
Sbjct: 142 GQIMLNSLHKYKPTVHLVRVGTEPRRVISFPFP 174


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = +2

Query: 731 KVCCPEHHYGKECTPCPXD-HSKPC 802
           K  CPE  YGK C     D  S PC
Sbjct: 361 KCTCPEGFYGKNCEFSGYDCDSNPC 385


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 325 KQRP*SFTCADTSAGGILYGTATDFQSRNVDANANH 432
           K RP +FT    S  G+L   A   Q  NV+   NH
Sbjct: 736 KNRP-TFTELSKSLEGLLENVAQYLQIENVEQTLNH 770


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 66  INVIISDNTTNSIWIQLN 119
           IN+I+SD  TN + +  N
Sbjct: 140 INIILSDPNTNKLKLNTN 157


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 644  KAEEFIEEWWAQDPD 688
            K ++ +  +W +DPD
Sbjct: 1205 KRDDLVNPYWIEDPD 1219


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 644  KAEEFIEEWWAQDPD 688
            K ++ +  +W +DPD
Sbjct: 1205 KRDDLVNPYWIEDPD 1219


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 644  KAEEFIEEWWAQDPD 688
            K ++ +  +W +DPD
Sbjct: 1205 KRDDLVNPYWIEDPD 1219


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 644  KAEEFIEEWWAQDPD 688
            K ++ +  +W +DPD
Sbjct: 1205 KRDDLVNPYWIEDPD 1219


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 708 AYRSVDSSGSWAHHSSMNSSAFSA 637
           AY S   SGS   HSS ++S   A
Sbjct: 34  AYSSSSPSGSSPQHSSSSASTSPA 57


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 708 AYRSVDSSGSWAHHSSMNSSAFSA 637
           AY S   SGS   HSS ++S   A
Sbjct: 34  AYSSSSPSGSSPQHSSSSASTSPA 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,381
Number of Sequences: 336
Number of extensions: 3882
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)