Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H23
         (833 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071548-1|AAL49170.1|  374|Drosophila melanogaster RE58433p pro...   126   4e-29
AE014134-17|AAF51560.1|  374|Drosophila melanogaster CG11377-PA ...   126   4e-29
AY060987-1|AAL28535.1|  221|Drosophila melanogaster GM14561p pro...    32   0.84 
AE014296-3105|AAF49190.2|  221|Drosophila melanogaster CG11577-P...    32   0.84 

>AY071548-1|AAL49170.1|  374|Drosophila melanogaster RE58433p
           protein.
          Length = 374

 Score =  126 bits (304), Expect = 4e-29
 Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
 Frame = +2

Query: 374 FCTVQPPTFNPEMLTPMRTIGDCQACRVFIESFKEGLERTSRGKYEGGDAAWEEEKLKKS 553
           F      +++PE   P      C+AC   + SF+ GLERT RG + GGD AWEEEKL+ S
Sbjct: 13  FIAAASASYSPEKPVPP----PCRACTQLVSSFRAGLERTKRG-HAGGDTAWEEEKLR-S 66

Query: 554 YKRSEIRLVDIQEGLCKTSKF--SFQCHSMAEKAEEFIEEWWAQDPDESTDLYAYICIDN 727
           YK SE+RLV+IQE LC   +      CH++A + E  +E+W+     ES DL +++CID 
Sbjct: 67  YKNSEVRLVEIQEKLCSEGEVINKDHCHNLANEHEALLEDWFIHKQTESPDLQSWLCIDQ 126

Query: 728 LKVCCPEHHYGKECTPC 778
           L VCCP + YG +C  C
Sbjct: 127 LTVCCPLNTYGPDCLTC 143


>AE014134-17|AAF51560.1|  374|Drosophila melanogaster CG11377-PA
           protein.
          Length = 374

 Score =  126 bits (304), Expect = 4e-29
 Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
 Frame = +2

Query: 374 FCTVQPPTFNPEMLTPMRTIGDCQACRVFIESFKEGLERTSRGKYEGGDAAWEEEKLKKS 553
           F      +++PE   P      C+AC   + SF+ GLERT RG + GGD AWEEEKL+ S
Sbjct: 13  FIAAASASYSPEKPVPP----PCRACTQLVSSFRAGLERTKRG-HAGGDTAWEEEKLR-S 66

Query: 554 YKRSEIRLVDIQEGLCKTSKF--SFQCHSMAEKAEEFIEEWWAQDPDESTDLYAYICIDN 727
           YK SE+RLV+IQE LC   +      CH++A + E  +E+W+     ES DL +++CID 
Sbjct: 67  YKNSEVRLVEIQEKLCSEGEVINKDHCHNLANEHEALLEDWFIHKQTESPDLQSWLCIDQ 126

Query: 728 LKVCCPEHHYGKECTPC 778
           L VCCP + YG +C  C
Sbjct: 127 LTVCCPLNTYGPDCLTC 143


>AY060987-1|AAL28535.1|  221|Drosophila melanogaster GM14561p
           protein.
          Length = 221

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +2

Query: 401 NPEMLTPMRTIGDCQACRVFIESFKEGLERTSRGK--YEGGDAAWEEEKLKKS-YKRSEI 571
           +PE    +R    C+AC++     +  L  T +     E G +  + +  K++ Y+RSE+
Sbjct: 23  SPEEEQGVRYANRCEACKILATELEARLGETGKSHDVIEIGYSVDDVKPKKRTEYRRSEL 82

Query: 572 RLVDIQEGLCK 604
           RL++  E +C+
Sbjct: 83  RLLESLENVCE 93



 Score = 30.3 bits (65), Expect = 3.4
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = +2

Query: 602 KTSKFSFQCHSMAEKAEEFIEEWWAQDPDESTDLYAYICIDNL 730
           + ++   QC ++ E+ EE I +W+ +  DE + L  ++C D++
Sbjct: 146 EVTQMKTQCENLLEEYEETISDWYFKHQDEKS-LKKHLCEDHV 187


>AE014296-3105|AAF49190.2|  221|Drosophila melanogaster CG11577-PA
           protein.
          Length = 221

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +2

Query: 401 NPEMLTPMRTIGDCQACRVFIESFKEGLERTSRGK--YEGGDAAWEEEKLKKS-YKRSEI 571
           +PE    +R    C+AC++     +  L  T +     E G +  + +  K++ Y+RSE+
Sbjct: 23  SPEEEQGVRYANRCEACKILATELEARLGETGKSHDVIEIGYSVDDVKPKKRTEYRRSEL 82

Query: 572 RLVDIQEGLCK 604
           RL++  E +C+
Sbjct: 83  RLLESLENVCE 93



 Score = 31.5 bits (68), Expect = 1.5
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +2

Query: 602 KTSKFSFQCHSMAEKAEEFIEEWWAQDPDESTDLYAYICIDNL 730
           + ++   QC ++ E+ EE I EW+ +  DE + L  ++C D++
Sbjct: 146 EVTQMKTQCENLLEEYEETISEWYFKHQDEKS-LKKHLCEDHV 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,368,849
Number of Sequences: 53049
Number of extensions: 696540
Number of successful extensions: 1481
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)