Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H22
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AF100669-2|AAK39264.1| 546|Caenorhabditis elegans Hypothetical ... 72 4e-13
Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical p... 30 1.7
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 28 6.7
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 6.7
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 28 6.7
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 28 6.7
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 28 6.7
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 28 6.7
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 8.9
>Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical
protein C51E3.6 protein.
Length = 555
Score = 78.2 bits (184), Expect = 6e-15
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Frame = +2
Query: 302 DTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPD-RSNIISTMIFVTGLITW 478
DTPP + + LQ + + A++ +P I+ ++C + R +IS+ +G+ T
Sbjct: 25 DTPPIGIALLYGLQQVMVCVSALLTVPLIMADSMCPGSSIAVLRQTLISSTFVSSGISTI 84
Query: 479 LQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRMCELS 658
+Q FG RL ++QG +++ ++LP C E S +V+ ++ L
Sbjct: 85 IQTLFGMRLALLQGTAFAYVPSVQGFMSLPENTCNATE-----SDYVPEEVYYGKLALLQ 139
Query: 659 GAIAVAALFQLFLGYFGVIGSLLRFVTPLTIAPTVALVGLXLFD 790
G + ++ + +G G++G L +F+ PLT++P + L+ D
Sbjct: 140 GCLIASSFVPILIGATGLVGMLTKFIGPLTVSPLMLLLAFSQVD 183
>Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical
protein T07G12.2 protein.
Length = 544
Score = 75.8 bits (178), Expect = 3e-14
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Frame = +2
Query: 278 GNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCM-EETDPDRSNIISTMI 454
G++ + ++D P F LQ L I A++ P+ + LC ET R +I+
Sbjct: 6 GDLHFHVNDVPHKSAIFFFGLQQMLVCISALLVTPYFVSNLLCAGAETTEVRVQLIAATF 65
Query: 455 FVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVW 634
+G+ T LQ TFG RL I+ G + +F P L ++ S + Q W
Sbjct: 66 ISSGIATILQTTFGLRLAILHGPSFAFF-PALHTFG---------DVYPCNSDTDTTQ-W 114
Query: 635 TSRMCELSGAIAVAALFQLFLGYFGVIGSLLRFVTPLTIAPTVALV 772
++ +SG++ VA L FLG G++G + + + P+TI P + L+
Sbjct: 115 KEKLQMISGSLFVAVLIMPFLGITGMVGRIAKHIGPITIVPMLMLL 160
>AF100669-2|AAK39264.1| 546|Caenorhabditis elegans Hypothetical
protein R11E3.2 protein.
Length = 546
Score = 72.1 bits (169), Expect = 4e-13
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +2
Query: 266 EARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPD-RSNII 442
E ++ + + ++D P + + Q + I ++ IP+++ +C + + + R +I
Sbjct: 3 EEKEDELVHHVNDIPSIPTILLIGFQQMMICISMLLVIPYMMSDMVCPGDKETEIRVQLI 62
Query: 443 STMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEER 622
S G+ T LQ TFG RL I+ G + ++L +LN P E
Sbjct: 63 SASFVTAGIATILQTTFGMRLAILHGPSFAYL----PVLNTFQSTYPCNE-------HTD 111
Query: 623 RQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLLRFVTPLTIAPTVALV 772
+W +M +SG+ VA L G+ G+IG L +F+ P+TI P + L+
Sbjct: 112 TSLWQHKMQMISGSCLVAVLVMPLFGFTGLIGFLSQFIGPITIVPIMTLL 161
>Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical
protein T07G12.5 protein.
Length = 555
Score = 68.9 bits (161), Expect = 4e-12
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Frame = +2
Query: 290 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPD-RSNIISTMIFVTG 466
+ +++ P + LQ + + +++ IP+++ LC + + R +IS +G
Sbjct: 6 FHVNEIPSPPSIMLFGLQQMMICLSSLLVIPYVVSDMLCAGDQAMEIRVQLISATFVTSG 65
Query: 467 LITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRM 646
+ T LQ TFG RL I+ G + +FL P L + C +T+ W +M
Sbjct: 66 IATILQTTFGMRLSILHGPSFAFL-PALHTFQA-TFPCD-------ANTDTSN--WQEKM 114
Query: 647 CELSGAIAVAALFQLFLGYFGVIGSLLRFVTPLTIAPTVALV 772
+SG+ +A L LG+ G++G + +++ P+TI P ++L+
Sbjct: 115 QMISGSCLIAVLIMPILGFTGLVGKISKYIGPVTIVPIMSLL 156
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Frame = +2
Query: 293 GIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPD-RSNIISTMIFVTGL 469
G++D P + Q + + ++ PF++ C R +IS G+
Sbjct: 8 GVNDVPSIKGILGFGFQQAMLCMSGLLVYPFLISNCACAGAAAVQLRVQLISATFVSCGI 67
Query: 470 ITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRMC 649
T Q TFG RL ++ G ++FL P A CP E E + W RM
Sbjct: 68 ATIFQTTFGLRLSVLHGPAMAFLPPLFAYKTQNL--CPYTE-----HDEVPPEFWMERMR 120
Query: 650 ELSGAIAVAALFQLFLGYFGVIGSLLRFVTPLTIAPTVALV 772
E+ G++ +A + +G G+ G L + + P+TI P + L+
Sbjct: 121 EIQGSLLLACFVFILVGMTGIAGHLSKLIGPITIVPLMLLL 161
>Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical
protein T07G12.4 protein.
Length = 485
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 653 LSGAIAVAALFQLFLGYFGVIGSLLRFVTPLTIAPTVALV 772
+SG++ A L FLG G++G + + + P+TI P + L+
Sbjct: 59 ISGSLFAAVLIMPFLGLTGMVGRMAKHIGPITIVPMLILL 98
>Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical
protein C55A1.8 protein.
Length = 337
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +2
Query: 326 IFMALQHYLTMIGAIVAIPFILCPALCMEETDP 424
I +++ +++ IG + A+P + PA C++ +P
Sbjct: 152 IILSVIYFIIFIGFVAALPHVQAPAACLQALEP 184
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +2
Query: 449 MIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQ 628
M+F L+ L + P VQ + F +P +N AW C +S E Q
Sbjct: 1 MLFTLPLLLLLHSVIAFSTPEVQHRSKRFQLPGQQTINPEAWFCGASRFQWKISHEVISQ 60
Query: 629 VWTSRMCELSGAIAV 673
+ EL+ AV
Sbjct: 61 TCDEKAIELNHCCAV 75
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical
protein K10C2.1 protein.
Length = 2314
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 792 WSNSXSPTSATVGAIV-NGVTNLNSDPITPKYPKNNWNKAATAMAPDS 652
W N S+ +G + NG + D +T N+WNKAA + +S
Sbjct: 75 WLNGGPGCSSLLGLLSENGPYRIQKDGVTVIENVNSWNKAANVLFLES 122
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 490 LRLSTANSSRRHHIIPG-ADARDTES 564
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 490 LRLSTANSSRRHHIIPG-ADARDTES 564
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 490 LRLSTANSSRRHHIIPG-ADARDTES 564
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 490 LRLSTANSSRRHHIIPG-ADARDTES 564
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 656 TVHTSYS-STPAAVLRYSWRPRSPHQDTSRPADSVSRASA 540
T H +S S+P A R R RSP Q RP+ +V S+
Sbjct: 398 TSHEGHSTSSPTAENRQCHRSRSPEQSNFRPSQTVPGLSS 437
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 247 SYIIDAHSPDSVQSDLDHVVVYHGIDPTTIRSQSYV 140
S ++D +PD D D V H I TI++ SY+
Sbjct: 127 SVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDSYL 162
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 247 SYIIDAHSPDSVQSDLDHVVVYHGIDPTTIRSQSYV 140
S ++D +PD D D V H I TI++ SY+
Sbjct: 127 SVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDSYL 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,015,739
Number of Sequences: 27780
Number of extensions: 416738
Number of successful extensions: 1303
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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