Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H22
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.6  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 759 VGAIVNGVTNL--NSDPITPKYPKNNWNKAATAMAPDSSHILLVHTCRRSSVL 607
           V + +N +TN   N  P+   YP   W K        S++ + +  C R  VL
Sbjct: 84  VPSSLNVITNKTGNGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRLWVL 136


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 416 FPPCREPGRG*TGSRQWPQS 357
           F P R PG G  G R +P+S
Sbjct: 52  FEPRRNPGPGSKGPRDFPRS 71


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = -2

Query: 529 YGAALNYWQSTAEGRLKPGY*TCDKYHSRYNIGSV 425
           YG  +  W+     R+   Y   D     YNIG +
Sbjct: 215 YGLIVYSWEQNRSWRITHSYFMPDPLAGDYNIGGL 249


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 590 PHQDTSRPADSVSRASA 540
           PHQD++ PAD     SA
Sbjct: 501 PHQDSATPADQPLDLSA 517


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 666 MAPDSSHILLVHTCRRSSVLMATKISSSG 580
           ++PDS H++ +        L+  +ISS G
Sbjct: 748 ISPDSRHLVTLDKQETGVTLVVQEISSDG 776


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,900
Number of Sequences: 438
Number of extensions: 5355
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)