Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H21
         (866 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9NGX3 Cluster: Bcl-2-like protein BUFFY; n=3; Sophopho...    37   0.76 
UniRef50_Q7KM33 Cluster: Bcl-2 family member protein; n=6; Dipte...    35   3.1  
UniRef50_A4KPJ5 Cluster: Major facilitator superfamily (MFS) tra...    33   9.4  

>UniRef50_Q9NGX3 Cluster: Bcl-2-like protein BUFFY; n=3;
           Sophophora|Rep: Bcl-2-like protein BUFFY - Drosophila
           melanogaster (Fruit fly)
          Length = 313

 Score = 36.7 bits (81), Expect = 0.76
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 PLDRTKRRFSTMXXXXXXXXXXXXXXXTIGWYLASHTQVKPQ-IVRQGRALCLQYIKTQI 646
           P + T+RR S +               TIGW  A   Q+  Q I+ QGR LC  YIK ++
Sbjct: 68  PKETTRRRLSNVSDAVTRKLSY-----TIGWKAA---QIPAQDIISQGRCLCGHYIKRRL 119

Query: 647 RRSTTCVKKQIVMKRLQRMI 706
           RRS     K++ ++R++ ++
Sbjct: 120 RRS-GLFNKKLGLQRIRSIL 138


>UniRef50_Q7KM33 Cluster: Bcl-2 family member protein; n=6;
           Diptera|Rep: Bcl-2 family member protein - Drosophila
           melanogaster (Fruit fly)
          Length = 325

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 15/48 (31%), Positives = 31/48 (64%)
 Frame = +2

Query: 566 LASHTQVKPQIVRQGRALCLQYIKTQIRRSTTCVKKQIVMKRLQRMIE 709
           + ++ + K  I+ QG+ LC QYI+ ++RR+    +K  V +RL+ +++
Sbjct: 112 MTNYQEYKMDIINQGKCLCGQYIRARLRRAGVLNRK--VTQRLRNILD 157


>UniRef50_A4KPJ5 Cluster: Major facilitator superfamily (MFS)
           transport protein; n=11; Francisella tularensis|Rep:
           Major facilitator superfamily (MFS) transport protein -
           Francisella tularensis subsp. holarctica 257
          Length = 455

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 279 NSKIFRPPKTTTSLYTSLHQMEKKMTSSYRRFVCVESSAL 398
           NSK++R  K T +L   L Q+  K    Y   +C+E +A+
Sbjct: 390 NSKVYRLDKLTPNLKVKLDQLLHKQKGIYESIICLEENAI 429


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,377,110
Number of Sequences: 1657284
Number of extensions: 15456151
Number of successful extensions: 38960
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38935
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)