Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H21
         (866 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      26   0.44 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.5  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 625 QTKCTPLAYDLRFDLCMTGKVPSYSC-GQAASH 530
           + + TP+ + L++  C+   +PS++C G+ AS+
Sbjct: 40  ECQVTPVIHVLQYPGCVPKPIPSFACIGRCASY 72


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/22 (27%), Positives = 16/22 (72%)
 Frame = -2

Query: 340 IWWSDVYSDVVVFGGLKIFEFP 275
           IW+ +V +++ +  G++I ++P
Sbjct: 193 IWFDEVVNELRILHGVEIRDYP 214


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 278 KFENFQTPENNNIA 319
           ++ENFQ  +NNN +
Sbjct: 142 QYENFQQYDNNNFS 155


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 114 VSDQITLLYILRHRAERIEPL 176
           +S+++ L  +LRH  ERI+ L
Sbjct: 260 LSEEVLLDELLRHFPERIQSL 280


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 278 KFENFQTPENNNIA 319
           ++ENFQ  +NNN +
Sbjct: 142 QYENFQQYDNNNFS 155


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 278 KFENFQTPENNNIA 319
           ++ENFQ  +NNN +
Sbjct: 142 QYENFQQYDNNNFS 155


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 562 PSYSCGQAASHSCSGCARHH 503
           P +   + A++ C G  RHH
Sbjct: 54  PLHIPAKRAAYDCEGVIRHH 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,309
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)