Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H17
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81494-4|CAB04050.2|  319|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AL117195-26|CAB55037.1|  153|Caenorhabditis elegans Hypothetical...    28   7.7  
AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z81494-4|CAB04050.2|  319|Caenorhabditis elegans Hypothetical
           protein F02E9.3 protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -3

Query: 417 GERFNTHSIKVPKNVRFQFINRNSGPTSHREHDTAGVW--LRAISCSLRIAFQTGTSAAL 244
           G+R  + +I V K  ++   NR    T + + +T  +   L+ ++C +R  FQ GT+   
Sbjct: 88  GKRMTSRAIHVSK--KWSQFNRREDKTDYLDDETMQILEDLKILNCKIRKRFQIGTTCPH 145

Query: 243 SV 238
           S+
Sbjct: 146 SL 147


>Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical
           protein C43F9.6 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -3

Query: 327 EHDTAGVWLRAISCSLRIAFQTGTSAALSVGLLHP*TYFTHCYNINAKLYGFILSFICLF 148
           E  TA   +++ + S ++  Q  T++  SVG   P    +     +A  YG+I SFI LF
Sbjct: 54  ERSTANTTIKSEAPSKKLITQQSTASIQSVGRRGP--KMSDGTEFDAGPYGYIFSFIFLF 111

Query: 147 SHSKLARKITV 115
               LA  + +
Sbjct: 112 VLWGLATMLAI 122


>AL117195-26|CAB55037.1|  153|Caenorhabditis elegans Hypothetical
           protein Y57A10A.32 protein.
          Length = 153

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +1

Query: 385 DFNRMCIETFTAIHGRTTMRHDLVHFIRHTSSDHYCEGRI*SLEQISIDGVTSYPER 555
           D  ++ I+TF  I+G    R D V F+    +    E  +  L Q + + +   P+R
Sbjct: 94  DLPQLLIDTFPTIYGDPETRVDYVDFVNSAQTQDQLEANLVMLYQNAEEHLAVEPQR 150


>AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2b protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +1

Query: 700 SSHASQENATVSSHETRXGFSEKTLVQENSNGARIXH----GPRNDGGQRETSXTRN 858
           +SH++++  TVSS   R  F +   +Q  +   R  H     P N     + S  RN
Sbjct: 123 ASHSNEQPTTVSSSSARQSFQDSASMQNPAESTRSIHYSRYYPENLTAPNDASNARN 179


>AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2a protein.
          Length = 772

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +1

Query: 700 SSHASQENATVSSHETRXGFSEKTLVQENSNGARIXH----GPRNDGGQRETSXTRN 858
           +SH++++  TVSS   R  F +   +Q  +   R  H     P N     + S  RN
Sbjct: 123 ASHSNEQPTTVSSSSARQSFQDSASMQNPAESTRSIHYSRYYPENLTAPNDASNARN 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,416,198
Number of Sequences: 27780
Number of extensions: 440886
Number of successful extensions: 1180
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)