Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H14
         (837 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001813-1|AAN71568.1|  316|Drosophila melanogaster RH35959p pro...    60   4e-09
AY061202-1|AAL28750.1|  389|Drosophila melanogaster LD15586p pro...    60   4e-09
AE013599-3535|AAM68234.1|  316|Drosophila melanogaster CG3082-PD...    60   4e-09
AE013599-3534|AAF46949.2|  389|Drosophila melanogaster CG3082-PC...    60   4e-09
AE013599-3533|AAF46948.1|  389|Drosophila melanogaster CG3082-PB...    60   4e-09
AE013599-3532|AAF46947.1|  389|Drosophila melanogaster CG3082-PA...    60   4e-09

>BT001813-1|AAN71568.1|  316|Drosophila melanogaster RH35959p
           protein.
          Length = 316

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = +3

Query: 621 RSVHMQNISKNMQYISKEDRKITLDPYTMKTNNPIQRPLCVMMNWMLXKPKHVLKYANVY 800
           R +  Q+I+KNM   +    ++ +DP T+    P   PL +MM W++ K KH+ KYA +Y
Sbjct: 36  RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 95

Query: 801 LXQDFDVV 824
               FDVV
Sbjct: 96  TEMGFDVV 103


>AY061202-1|AAL28750.1|  389|Drosophila melanogaster LD15586p
           protein.
          Length = 389

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = +3

Query: 621 RSVHMQNISKNMQYISKEDRKITLDPYTMKTNNPIQRPLCVMMNWMLXKPKHVLKYANVY 800
           R +  Q+I+KNM   +    ++ +DP T+    P   PL +MM W++ K KH+ KYA +Y
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168

Query: 801 LXQDFDVV 824
               FDVV
Sbjct: 169 TEMGFDVV 176


>AE013599-3535|AAM68234.1|  316|Drosophila melanogaster CG3082-PD,
           isoform D protein.
          Length = 316

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = +3

Query: 621 RSVHMQNISKNMQYISKEDRKITLDPYTMKTNNPIQRPLCVMMNWMLXKPKHVLKYANVY 800
           R +  Q+I+KNM   +    ++ +DP T+    P   PL +MM W++ K KH+ KYA +Y
Sbjct: 36  RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 95

Query: 801 LXQDFDVV 824
               FDVV
Sbjct: 96  TEMGFDVV 103


>AE013599-3534|AAF46949.2|  389|Drosophila melanogaster CG3082-PC,
           isoform C protein.
          Length = 389

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = +3

Query: 621 RSVHMQNISKNMQYISKEDRKITLDPYTMKTNNPIQRPLCVMMNWMLXKPKHVLKYANVY 800
           R +  Q+I+KNM   +    ++ +DP T+    P   PL +MM W++ K KH+ KYA +Y
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168

Query: 801 LXQDFDVV 824
               FDVV
Sbjct: 169 TEMGFDVV 176


>AE013599-3533|AAF46948.1|  389|Drosophila melanogaster CG3082-PB,
           isoform B protein.
          Length = 389

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = +3

Query: 621 RSVHMQNISKNMQYISKEDRKITLDPYTMKTNNPIQRPLCVMMNWMLXKPKHVLKYANVY 800
           R +  Q+I+KNM   +    ++ +DP T+    P   PL +MM W++ K KH+ KYA +Y
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168

Query: 801 LXQDFDVV 824
               FDVV
Sbjct: 169 TEMGFDVV 176


>AE013599-3532|AAF46947.1|  389|Drosophila melanogaster CG3082-PA,
           isoform A protein.
          Length = 389

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = +3

Query: 621 RSVHMQNISKNMQYISKEDRKITLDPYTMKTNNPIQRPLCVMMNWMLXKPKHVLKYANVY 800
           R +  Q+I+KNM   +    ++ +DP T+    P   PL +MM W++ K KH+ KYA +Y
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168

Query: 801 LXQDFDVV 824
               FDVV
Sbjct: 169 TEMGFDVV 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,889,952
Number of Sequences: 53049
Number of extensions: 637295
Number of successful extensions: 1014
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)