Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H13
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   6.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 201 HAVISMATVTTSDRTILSDDDGSNVAVG 284
           H + + AT+   +  ++S+DD S++  G
Sbjct: 206 HVIYAFATIDPHNFNMISNDDESDIIQG 233


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 578 VLLVCSH*VFLPFKYKSLLKRISSLKI 658
           + LVC+       +YK L K + S KI
Sbjct: 122 IFLVCNVLTVFKIRYKDLNKALESSKI 148



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -3

Query: 485 CHVQYSEM*TYIMNITCCLTASYENIKVEVVGSKKNVGLIQ 363
           CH+        + N+       Y+++   +  SK +VGLI+
Sbjct: 114 CHICELHTIFLVCNVLTVFKIRYKDLNKALESSKISVGLIR 154


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 512 TLFHVTSQICNMP 550
           T+FH  S IC+ P
Sbjct: 508 TVFHTQSNICDWP 520


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,699
Number of Sequences: 336
Number of extensions: 3293
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)