Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H13
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003259-1|AAO25016.1|  295|Drosophila melanogaster LD24265p pro...    68   2e-11
AE013599-1780|AAF58327.1|  295|Drosophila melanogaster CG6543-PB...    68   2e-11
AE013599-1779|AAF58326.1|  295|Drosophila melanogaster CG6543-PA...    68   2e-11
AY069730-1|AAL39875.1|  378|Drosophila melanogaster LP03547p pro...    29   6.9  
AE014297-1524|AAF54816.1|  378|Drosophila melanogaster CG5844-PA...    29   6.9  

>BT003259-1|AAO25016.1|  295|Drosophila melanogaster LD24265p
           protein.
          Length = 295

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = -3

Query: 422 SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 252
           ++E IK EV G  KNVG+I LNRPKALNALC  L  EL  A+  F  D  I+AI++T
Sbjct: 37  NWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKELSTALQQFSKDKTISAIVLT 93


>AE013599-1780|AAF58327.1|  295|Drosophila melanogaster CG6543-PB,
           isoform B protein.
          Length = 295

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = -3

Query: 422 SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 252
           ++E IK EV G  KNVG+I LNRPKALNALC  L  EL  A+  F  D  I+AI++T
Sbjct: 37  NWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKELSTALQQFSKDKTISAIVLT 93


>AE013599-1779|AAF58326.1|  295|Drosophila melanogaster CG6543-PA,
           isoform A protein.
          Length = 295

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = -3

Query: 422 SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 252
           ++E IK EV G  KNVG+I LNRPKALNALC  L  EL  A+  F  D  I+AI++T
Sbjct: 37  NWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKELSTALQQFSKDKTISAIVLT 93


>AY069730-1|AAL39875.1|  378|Drosophila melanogaster LP03547p
           protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 398 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIII 255
           +V   KN+ LI +NRP+  NA+      +L  A  +F+AD      ++
Sbjct: 50  LVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVL 97


>AE014297-1524|AAF54816.1|  378|Drosophila melanogaster CG5844-PA
           protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 398 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIII 255
           +V   KN+ LI +NRP+  NA+      +L  A  +F+AD      ++
Sbjct: 50  LVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEADDTSPVAVL 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,953,022
Number of Sequences: 53049
Number of extensions: 570904
Number of successful extensions: 930
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)