Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H13
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.055
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 33 0.17
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 33 0.17
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 29 2.7
Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 68.9 bits (161), Expect = 4e-12
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = -3
Query: 449 MNITCCLTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNI 270
M + + + E IK+E VG K+NV LI+LNRPKALNALC L EL A+ D D ++
Sbjct: 21 MQVAAFSSKAPEMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSV 80
Query: 269 AAIIIT 252
AI+IT
Sbjct: 81 GAIVIT 86
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -3
Query: 410 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 252
I + G+ +NV LI LNRP ALNALC+ L +EL + + + D + I++T
Sbjct: 2 ITLSRTGAAENVALITLNRPSALNALCRELMLELSENLLKVEKDQSYHVIVLT 54
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -3
Query: 386 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 252
K NV + LNRPK NAL + +F++L ND D +IA ++ T
Sbjct: 11 KNNVLWVTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFT 55
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.055
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = -3
Query: 416 ENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITKNSPI 237
EN+ V + V I LNRPK NAL ++ + KA+ + D + + +IT N
Sbjct: 124 ENVDGLSVTREGKVFKIALNRPKKFNALTLEMYQGIQKALEVSNNDKSTSITVITANGSY 183
Query: 236 *CSHRSHRNY 207
C+ N+
Sbjct: 184 YCAGNDLTNF 193
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = -3
Query: 425 ASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIII 255
A+ I V+ GSKK ++ LNRPKALNAL + E + +++ S++ +I+
Sbjct: 8 AAKSEILVDTHGSKK---VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVIL 61
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = -3
Query: 425 ASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIII 255
A+ I V+ GSKK ++ LNRPKALNAL + E + +++ S++ +I+
Sbjct: 31 AAKSEILVDTHGSKK---VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVIL 84
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3
Query: 431 LTASYENIKVEVVGSKKNVG----LIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAA 264
+++ Y ++K+ V KNVG + LNRP NAL ++ E+G D D
Sbjct: 1 MSSKYNSLKLVKV---KNVGDFVYKVSLNRPSKFNALNMVIWKEIGDCFQLIDEDPECRV 57
Query: 263 IIITKNSPI*CS 228
+I+ CS
Sbjct: 58 VILQGEGKHFCS 69
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 407 KVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITKNSPI*CS 228
++ V + V ++LNRP LN ++ E KA++ D +III+ C+
Sbjct: 26 EISVKEERPYVYNVKLNRPAKLNTFTMDMWREFKKAIDSLADDPKCRSIIISGEGKAFCA 85
>Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITK-NSPI* 234
IK++ GS N G N L LC P G+ +DF D N + I+ K +
Sbjct: 504 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAFR 561
Query: 233 CSHRSHRNYSMNTIIHLVP 177
SH SH + + LVP
Sbjct: 562 RSHWSHPLKKIIKTMQLVP 580
>Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITK-NSPI* 234
IK++ GS N G N L LC P G+ +DF D N + I+ K +
Sbjct: 501 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAFR 558
Query: 233 CSHRSHRNYSMNTIIHLVP 177
SH SH + + LVP
Sbjct: 559 RSHWSHPLKKIIKTMQLVP 577
>Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITK-NSPI* 234
IK++ GS N G N L LC P G+ +DF D N + I+ K +
Sbjct: 504 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAFR 561
Query: 233 CSHRSHRNYSMNTIIHLVP 177
SH SH + + LVP
Sbjct: 562 RSHWSHPLKKIIKTMQLVP 580
>Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITK-NSPI* 234
IK++ GS N G N L LC P G+ +DF D N + I+ K +
Sbjct: 501 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAFR 558
Query: 233 CSHRSHRNYSMNTIIHLVP 177
SH SH + + LVP
Sbjct: 559 RSHWSHPLKKIIKTMQLVP 577
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,831
Number of Sequences: 27780
Number of extensions: 307589
Number of successful extensions: 611
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -