Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H12
         (442 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098996-6|AAC68709.1|  481|Caenorhabditis elegans Hypothetical ...    28   2.6  
Z70683-6|CAA94591.2|  512|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z49888-6|CAD44128.1|  428|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z49888-5|CAA90065.2|  409|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z47069-5|CAD44131.1|  428|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z47069-4|CAA87339.2|  409|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical ...    27   8.0  

>AF098996-6|AAC68709.1|  481|Caenorhabditis elegans Hypothetical
           protein T11F1.2 protein.
          Length = 481

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 198 VFCTQTMADFSSDMSKLTAVNSCHSPMNFDH 106
           +F +  MADF+ D+ KLT  + C     F++
Sbjct: 44  LFLSCVMADFNYDLEKLTLTHKCDPQCTFNY 74


>Z70683-6|CAA94591.2|  512|Caenorhabditis elegans Hypothetical
           protein F13B12.2 protein.
          Length = 512

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 258 IKNMLNDSAKVFFFCLLEIL 317
           I+N++ D  KV F CL+ IL
Sbjct: 20  IRNVIEDQGKVVFICLITIL 39


>Z49888-6|CAD44128.1|  428|Caenorhabditis elegans Hypothetical
           protein F47A4.1b protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 97  ICFIFCRY*NLATIGTMFLKKN*PSRKSCK 8
           ICF+F     LATIG +   +  P+ KS +
Sbjct: 336 ICFVFASLFELATIGFLMRNEGKPATKSSR 365


>Z49888-5|CAA90065.2|  409|Caenorhabditis elegans Hypothetical
           protein F47A4.1a protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 97  ICFIFCRY*NLATIGTMFLKKN*PSRKSCK 8
           ICF+F     LATIG +   +  P+ KS +
Sbjct: 317 ICFVFASLFELATIGFLMRNEGKPATKSSR 346


>Z47069-5|CAD44131.1|  428|Caenorhabditis elegans Hypothetical
           protein F47A4.1b protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 97  ICFIFCRY*NLATIGTMFLKKN*PSRKSCK 8
           ICF+F     LATIG +   +  P+ KS +
Sbjct: 336 ICFVFASLFELATIGFLMRNEGKPATKSSR 365


>Z47069-4|CAA87339.2|  409|Caenorhabditis elegans Hypothetical
           protein F47A4.1a protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 97  ICFIFCRY*NLATIGTMFLKKN*PSRKSCK 8
           ICF+F     LATIG +   +  P+ KS +
Sbjct: 317 ICFVFASLFELATIGFLMRNEGKPATKSSR 346


>AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical
           protein T11F1.6 protein.
          Length = 431

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 198 VFCTQTMADFSSDMSKLTAVNSCHSPMNFDH 106
           +F    ++DF+ D+ KLT  + C     F+H
Sbjct: 9   LFIPFILSDFAYDLEKLTLTHKCDLQCTFNH 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,303,448
Number of Sequences: 27780
Number of extensions: 124939
Number of successful extensions: 286
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)