Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H09
(896 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.059
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 32 0.72
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 31 1.7
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 30 2.2
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 30 2.9
SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_17069| Best HMM Match : Transposase_8 (HMM E-Value=7.7) 30 2.9
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 30 2.9
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 30 2.9
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 3.9
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.9
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 29 3.9
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 29 5.1
SB_24456| Best HMM Match : Lipase_chap (HMM E-Value=1.3) 29 5.1
SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10) 29 5.1
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 5.1
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 6.7
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35) 28 8.9
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 35.5 bits (78), Expect = 0.059
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 644 KLPTSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNAS 823
+L +SA + + SVA S P + SS I + T+ + T T ++++
Sbjct: 1821 QLASSAASSTQVTRSVASSTHLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASST 1880
Query: 824 QCXRNLWPSTSAMP 865
Q ++ PST MP
Sbjct: 1881 QAATSVTPSTQGMP 1894
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 31.9 bits (69), Expect = 0.72
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 650 PTSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQC 829
P+ P T+ PT+ +Y+ T P++T +++ T YT+ + T T+YTS S
Sbjct: 54 PSYTPTTSYTPTT-SYTPTTSYTP-TPSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYT 111
Query: 830 XRNLWPSTSAMPLPHLIPS 886
P+ S P P P+
Sbjct: 112 -----PTPSYTPTPSYTPT 125
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + ++ +Y+ T P++T +++ T YT+ + T T+YTS S
Sbjct: 150 TSYTSTTSYTSTTSYTST-------PSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTS 202
Query: 833 RNLWPS-TSAMPLP 871
+ S TS P P
Sbjct: 203 TTSYTSTTSYTPTP 216
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 728 PAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCXRNLWPSTSA 859
P++T +++ T YT+ + T +YTS S + ST++
Sbjct: 144 PSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTS 187
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + ++ +Y+ T P++T +++ T YT+ ++ T T+YTS S
Sbjct: 6 TSYTSTTSYTSTTSYTST-------PSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTS 58
Query: 833 RNLWPST 853
+ ST
Sbjct: 59 TTSYTST 65
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + ++ +Y+ T P++T +++ T YT+ + T T+YTS S
Sbjct: 48 TSYTSTTSYTSTTSYTST-------PSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTC 100
Query: 833 RNLWPSTSA 859
+ ST++
Sbjct: 101 TTSYTSTTS 109
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + ++ +Y+ T ++T +++ T YT+ + T T+YTS S
Sbjct: 54 TSYTSTTSYTSTPSYTSTTS-YTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTTSYTS 112
Query: 833 RNLW-PSTSAMPLP 871
+ P+TS P P
Sbjct: 113 TTSYTPTTSYTPTP 126
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 722 FCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCXRNLWPSTSA 859
F ++T +++ T YT+ + T T+YTS S + + ST++
Sbjct: 4 FTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTSSYTSTTS 49
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + ++ +Y+ T ++T +S+ T YT+ + T T+YTS S
Sbjct: 12 TSYTSTTSYTSTPSYTSTTS-YTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTS 70
Query: 833 RNLWPSTSA 859
+ ST++
Sbjct: 71 TTSYTSTTS 79
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 734 HTWSSAITKXRIYTAAATVTDNTNYTSNASQCXRNLWPSTSA 859
+T++++ T YT+ + T +YTS S + STS+
Sbjct: 2 YTFTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTSS 43
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + T+ +Y+ T ++T +++ T YT+ + T T+YTS S
Sbjct: 72 TSYTSTTSYTTTTSYTPTTS-YTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTS 130
Query: 833 RNLWPSTSA 859
+ ST++
Sbjct: 131 TTSYTSTTS 139
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 650 PTSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQC 829
PT++ T TS T ++T +++ T YT+ + T T+YTS S
Sbjct: 64 PTTSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYT 123
Query: 830 XRNLWPSTSA 859
+ ST++
Sbjct: 124 STTSYTSTTS 133
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 650 PTSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQC 829
P+ P T+ T+ S T P++T +++ T YT+ + T T+YT S
Sbjct: 36 PSYTPTTSYTSTTSYTSTTSYTPT--PSYTPTTSYTTTTSYTSTTSYTTTTSYTPTTSYT 93
Query: 830 XRNLWPSTSA 859
+ ST++
Sbjct: 94 STTSYTSTTS 103
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + ++ +Y+ T ++T +++ T YT+ + T T+YTS S
Sbjct: 126 TSYTSTTSYTSTTSYTCTTSYTC-TTSYTCTTSYTSTTSYTSTTSYTSTTSYTSTTSYTT 184
Query: 833 RNLWPSTSA 859
+ +T++
Sbjct: 185 TTSYTTTTS 193
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQC- 829
TS T + ++ +Y+ T P++T +++ T YT + T T+YTS S
Sbjct: 18 TSYTHTTSYTSTPSYTCTTS-YTSTPSYTSTTSYTPTPSYTCTTSYTSTTSYTSTTSYTP 76
Query: 830 XRNLWPSTSAMPLPHLIPS 886
+ P+TS P P+
Sbjct: 77 TTSYTPTTSYTPTTSYTPT 95
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 662 PRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNAS-QCXRN 838
P T+ PT+ +Y+ T P++T + + T YT+ + T T+YT S C +
Sbjct: 76 PTTSYTPTT-SYTPTTSYTP-TPSYTPTPSYTCTTSYTSTTSYTPTTSYTPTTSYTCTTS 133
Query: 839 LWPSTSAMPLPHLIPS 886
+TS P P+
Sbjct: 134 YTSTTSYTPTTSYTPT 149
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 30.7 bits (66), Expect = 1.7
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Frame = +2
Query: 368 PKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMP 547
P P+P G ++E NA T ++ TS + +P +TS ++N+
Sbjct: 798 PSISPSPNGTTSFMYETIAVNATSTSVR--TSKVYE------TILPNATSTIGLSQNSSR 849
Query: 548 VWELQQ----PNITGVQESPFRLQLXXXXXXXXXVAKLPTSAPRTNAIPTSVAYSHTQRP 715
++E PN+T V P + A +PTS+P + S +HT
Sbjct: 850 LFETDSVAPSPNVTFVTTRPSSTKASSSFLSLVFTADVPTSSPSVLSASLSSLSTHTGSS 909
Query: 716 EIFCPAHTWSSAITKXRIYT 775
+ P SS+IT T
Sbjct: 910 IVGLPI---SSSITSTATQT 926
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 30.3 bits (65), Expect = 2.2
Identities = 29/129 (22%), Positives = 45/129 (34%), Gaps = 3/129 (2%)
Frame = +2
Query: 359 PIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAP--- 529
P+ P + PAPA + E PN K H+ + +P+ P TS P
Sbjct: 269 PVTPTAAPAPAQSHE---EVAAPNLRKRHVFVPETDDDSPSPTNAEQHPCQTSPATPQPA 325
Query: 530 AENNMPVWELQQPNITGVQESPFRLQLXXXXXXXXXVAKLPTSAPRTNAIPTSVAYSHTQ 709
E+ P + P+ +G ++ +A +N P S Q
Sbjct: 326 KESLAPATIEEVPHQSGTSQA-----APIDNHKGSSIATPVVGISASNITPPPQPQSILQ 380
Query: 710 RPEIFCPAH 736
P+ CP H
Sbjct: 381 MPQTSCPTH 389
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 30.3 bits (65), Expect = 2.2
Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 1/145 (0%)
Frame = +2
Query: 440 THMQAQTSAISNPNIMQM-NNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFRLQLXX 616
+H +Q++++ P+++Q +N S +PA++ V + V S +
Sbjct: 163 SHSLSQSASLGTPSLVQNPDNTVSSVLAISPAQSASSVIQASSSTSAVVASSSAVIMTNA 222
Query: 617 XXXXXXXVAKLPTSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTD 796
T+A T TS + + + + + ++A TK T A T
Sbjct: 223 PKITTTEQLATTTAAETTPTTTTSASTTTATTTKATTTSVSTTTATTKEEESTTTAETTT 282
Query: 797 NTNYTSNASQCXRNLWPSTSAMPLP 871
T +S+ + P+T+ P P
Sbjct: 283 VTATKPLSSEETSTMLPTTAPTPKP 307
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 618 HPQTTPMLPNFQHPPHEQMQYRPQLPI 698
HP P + Q PP++Q Q PQ P+
Sbjct: 1629 HPSIHPQMQTQQPPPYQQPQQMPQKPV 1655
>SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -2
Query: 439 FFGIRLTRLPN---RHLVPSWCRNTFRLYRYNIICNSYEVRICFAFFHYCEITVVTVNI 272
+F I LT P+ RHLVPS + L+ + I + + + H+ IT++TVNI
Sbjct: 260 YFSIILTSSPSKYHRHLVPSPFHHDNSLHHFPYI-SIINISLKNRHHHHQHITIITVNI 317
>SB_17069| Best HMM Match : Transposase_8 (HMM E-Value=7.7)
Length = 733
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +2
Query: 236 YFFISRYILKNANIYGDNCDFTVMKKRKANSNLIRVTNNIVPIKPKSVPAPAGNKMPIWE 415
Y F + +L+ +++ +N ++ M+ + + + +P +P SVPAP G K P+
Sbjct: 660 YEFTHKGMLERLHVFIENQEWLSMQHHARRGHAVP-SCPWIPRRPASVPAP-GTKSPL-- 715
Query: 416 PRQPNAEKTHMQAQTS 463
Q ++E+ H QA S
Sbjct: 716 --QLHSEQPHHQAALS 729
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.9 bits (64), Expect = 2.9
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 10/206 (4%)
Frame = +2
Query: 296 FTVMKKRKANSNLIRVTNNIVPIKPKSVP--APAGNKMPIWEPRQPNAEKTHMQAQTSAI 469
FT K A+S I V ++ +VP A + ++ A +T +T+A+
Sbjct: 2522 FTTGPKTTASSETIVVQKTTAALETTAVPEETTAAPEATTYQGPTTMAAETTFVPETTAV 2581
Query: 470 SNPNIMQMNNIPFSTSLTAPAENNMPVWELQQ---PNITGVQESPFRLQLXXXXXXXXXV 640
++ + +T++ M + P T V E+ +
Sbjct: 2582 PETTGSEITGVSETTAVPETTSGPMTTTGPETTAAPETTAVPETSAAPE--TAAVPETTA 2639
Query: 641 AKLPTSAPRTNAIP-TSVAYSHTQRPE----IFCPAHTWSSAITKXRIYTAAATVTDNTN 805
A T+AP T A+P T+ A T PE + A ++++ + V D T
Sbjct: 2640 ASETTAAPETTAVPETTAASETTAAPETTAVLGTTAVPGTTSVPGTTVAAETTVVRDTTA 2699
Query: 806 YTSNASQCXRNLWPSTSAMPLPHLIP 883
+ P T+ +P + P
Sbjct: 2700 VPGTTAAPEATAVPETTTLPKTTVAP 2725
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSH-TQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQC 829
TSAP+T A+P + A T PE T S+ T T +A T T+ + +
Sbjct: 1893 TSAPKTTAVPEATAAPETTSAPETTAAPETTSAPETTSVPETTSAPETTALPETTASPET 1952
Query: 830 XRNLWPSTSAMPLPHLIP 883
P T+ P +P
Sbjct: 1953 TAK--PDTTGAPETTFVP 1968
Score = 28.3 bits (60), Expect = 8.9
Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 2/152 (1%)
Frame = +2
Query: 416 PRQPNAEKTHMQAQTSAISNPNI-MQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQES 592
P A +T +T+A+ ++ +IP +T++ P +P + P IT E+
Sbjct: 2256 PETTAAPETTAPPETTALPKTTAALETFSIPDTTAV--PGTTAVPE-TIAAPEITAAPEN 2312
Query: 593 PFRLQLXXXXXXXXXVAKLPTSAPRTNAIPTSVAYSHTQR-PEIFCPAHTWSSAITKXRI 769
+ A TSAP T A+P + A T PE T + T
Sbjct: 2313 TAVPETIETPETTS--APETTSAPETTALPKTTAVPETTTPPETTAKPETTGAPETTSAP 2370
Query: 770 YTAAATVTDNTNYTSNASQCXRNLWPSTSAMP 865
T A V + T S+ P T+A P
Sbjct: 2371 KTTA--VQEATASPETTSEPETTALPKTTAAP 2400
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 29.9 bits (64), Expect = 2.9
Identities = 38/156 (24%), Positives = 54/156 (34%), Gaps = 3/156 (1%)
Frame = +2
Query: 368 PKSVPAPAGNKMP--IWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENN 541
PK+ AP + P P A +T M +T+ + TS AP
Sbjct: 577 PKTTAAPKTSAAPETTAAPETTAAPETTMAPETTTAPETTAKAETTVAPETS-AAPETTA 635
Query: 542 MPVWELQQPNITGVQESPFRLQLXXXXXXXXXVAKLPTSAPRTNAIP-TSVAYSHTQRPE 718
P P T E+ ++ A TSAP T A P T+ A T PE
Sbjct: 636 APE-TTAAPETTMAPETTAEIE--TTMTPETNAAPETTSAPETTAAPETTAAPETTAAPE 692
Query: 719 IFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQ 826
T ++ T T +A+ T T+ A +
Sbjct: 693 TTAAPETTAAPETTAAPETTSASETTAAPETTTAPE 728
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 653 TSAPRTNAIP-TSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQC 829
T+AP T A+P T+ A T PE T ++ T T AA T T+ A +
Sbjct: 850 TAAPETTAVPETTAAPETTAAPETTAAPETTAAPETTAAPDTTAAPETTAALETTAAPET 909
Query: 830 XRNLWPSTSAMPLPHLIP 883
P T+A P +P
Sbjct: 910 TAA--PDTTAAPDTTAVP 925
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 544 AGVGASTAQYHRSTRESLPTSAESDTPKQHQCCQTSNIRPTNKCNT 681
AG A + + S+R SLP++ S T + Q + RP KC T
Sbjct: 395 AGTPAGSRRSSSSSRSSLPSTPRSRTSSRGQEVVSKPPRPQKKCTT 440
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCP--AHTWSSAITKXRIYTAAATVTDNTNYTSNASQ 826
TS T + ++ +Y+ T + P ++T +++ T YT+ + T T+YTS S
Sbjct: 24 TSYTSTTSYTSTTSYTSTTS---YTPTTSYTCTTSYTSTTSYTSTTSYTSTTSYTSTTSY 80
Query: 827 CXRNLWPST-SAMPLP 871
+ ST S P P
Sbjct: 81 TSTTSYRSTPSYTPTP 96
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 728 PAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCXRNLW-PSTS 856
P++T +++ T YT + T T+YTS S + P+TS
Sbjct: 6 PSYTCTTSYTSTTSYTCTTSYTSTTSYTSTTSYTSTTSYTPTTS 49
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/80 (25%), Positives = 30/80 (37%)
Frame = +1
Query: 475 SQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRESLPTSAESDTPKQHQCCQTSN 654
+ Y + Y + CT ST Y +T + TS S T + T
Sbjct: 36 TSYTSTTSYTPTTSYTCTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYRSTPSYTPT 95
Query: 655 IRPTNKCNTDLSCLFTYTTT 714
P+ C T +C +YT+T
Sbjct: 96 --PSYTCTTSYTCTTSYTST 113
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + + +Y+ T ++T +++ T YT + T T+YTS S
Sbjct: 12 TSYTSTTSYTCTTSYTSTTS-YTSTTSYTSTTSYTPTTSYTCTTSYTSTTSYTSTTSYTS 70
Query: 833 RNLWPSTSA 859
+ ST++
Sbjct: 71 TTSYTSTTS 79
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +1
Query: 394 EQDADLGASSTECRKNTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQY 573
+ D L + +C K+ H S S+ K + E+ ++ T + + S ++
Sbjct: 163 DTDEKLSSKLLKCLKDKHKSRSRSNSKDKAQDTEKDRKSSRSPSTDKRKSRSRSRSRSRS 222
Query: 574 HRSTRESLPTSAESDTPKQHQCCQTS 651
HR +R+ + + S +PK+ + + S
Sbjct: 223 HRKSRKRSESRSRSRSPKKSRSARRS 248
>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2937
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +1
Query: 439 NTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRESLPTSAESD 618
+ H+S+ + + YY P N+ +E+ A + A A +H +T S+
Sbjct: 2173 HAHSSNTIYSSCATYYGSIMLPG-NQLGLDPKERVAHI-ARLAGFHNAT--------SSN 2222
Query: 619 TPKQHQCCQTSNIRPTNKCNTDLSCLFTY 705
+ +C SN+ PT+ C+ LSC T+
Sbjct: 2223 SFAFLRCDSCSNLLPTSGCHASLSCASTH 2251
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.5 bits (63), Expect = 3.9
Identities = 38/147 (25%), Positives = 51/147 (34%), Gaps = 2/147 (1%)
Frame = +2
Query: 431 AEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFRLQL 610
A +T + A+T I+ P+ S T E + P T E+ +
Sbjct: 1973 AAETTVAAET--IAAPDTTVAAETTASAETTVAPETTLAPESTLAPETTMAPETTMAPE- 2029
Query: 611 XXXXXXXXXVAKLPTSAPRTN-AIPTSVAYSHTQRPEIFC-PAHTWSSAITKXRIYTAAA 784
VA T AP T A T+ + T PE P T T TAAA
Sbjct: 2030 -TTVAPETTVAAESTDAPDTTVAAETTASAETTVAPETTAAPDTTLVPDTTVAAETTAAA 2088
Query: 785 TVTDNTNYTSNASQCXRNLWPSTSAMP 865
T+ T + NL P T+A P
Sbjct: 2089 ETTETTAVPATTDAPATNLPPETTAAP 2115
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQCX 832
TS T + ++ +Y+ T P++T +++ T YT+ + T T+YTS S
Sbjct: 171 TSYTSTTSYTSTTSYTPTPS-YTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTP 229
Query: 833 RNLWPSTSA 859
+ ST++
Sbjct: 230 TTSYTSTTS 238
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +1
Query: 565 AQYHRSTRESLPTSAESDTPKQHQCCQTSNIRPTNKCNTDLSCLFTYTTT*DLLSR 732
+++ R +++P S ++ + + NKCN++ SC+F T LL++
Sbjct: 607 SKHTRDNNDNIPKVTASGKHLNNEIDENPGVVTINKCNSEKSCMFDPTKCPMLLTK 662
>SB_24456| Best HMM Match : Lipase_chap (HMM E-Value=1.3)
Length = 456
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 562 TAQYHRSTRESLPT--SAESDTPKQHQCCQTSNIRPTNKCNTDLS 690
T +++R +LPT +D ++H C T+ ++ +KC TD++
Sbjct: 182 TQEHYRYYTRALPTLHKCVTDVTQEHYRCYTNALQMLHKCVTDVT 226
>SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)
Length = 508
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 580 STRESLPTSAESDT----PKQHQCCQTSNIRPTNKCNTDLSCLFTYTTT*DLLSRPHLEF 747
ST ESLPT++E +T +H+C T N P + C F ++ + EF
Sbjct: 80 STAESLPTASEGETQPGSSDKHECATTVNDAPKKRLRK--RCRFFFSRS-GCKRNDLCEF 136
Query: 748 SHHQ 759
SH +
Sbjct: 137 SHEK 140
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +2
Query: 638 VAKLPTSAPRTN-AIPTSVAYSHTQRPEIFC-PAHTWSSAITKXRIYTAAATVTDNTNYT 811
VA T AP T A T+ + T PE P T T TAAA T+ T
Sbjct: 225 VAAESTDAPDTTVAAETTASAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTAVP 284
Query: 812 SNASQCXRNLWPSTSAMP 865
+ NL P T+A P
Sbjct: 285 ATTDAPATNLPPETTAAP 302
Score = 28.3 bits (60), Expect = 8.9
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 5/161 (3%)
Frame = +2
Query: 416 PRQPNAEKTHMQAQTSAIS----NPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGV 583
P +A T++ +T+A +P + ++ + TA AE + P+ T V
Sbjct: 284 PATTDAPATNLPPETTAAPETTVSPETIAASDTTVAAETTASAETTVAPETTAVPDTTLV 343
Query: 584 QESPFRLQLXXXXXXXXXVAKLPTSAPRTNAIP-TSVAYSHTQRPEIFCPAHTWSSAITK 760
++ Q VA TSAP T A P T++ T PE + + T
Sbjct: 344 PDTTLAPQ--TTVAPESTVAPENTSAPETTAAPDTTLVSDTTLAPETTVAPESTVAPETT 401
Query: 761 XRIYTAAATVTDNTNYTSNASQCXRNLWPSTSAMPLPHLIP 883
T A T T+ A + + T+A P +IP
Sbjct: 402 VAPETTVAPETTMPPETTMAPE--TTVAAETTAAPETTVIP 440
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 633 PMLPNFQHPPHEQMQYR-PQLPI-HIHNDLRSFVPPTLGVQPSP 758
P P ++HPP Y+ P P HI L +P T + P+P
Sbjct: 124 PSYPTYKHPPFPHPTYKHPSYPSPHIQASLLPLIPHT-SIPPTP 166
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +2
Query: 653 TSAPRTNAIPTSVAYSH-TQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTSNASQC 829
TSAP+T A+P + A T PE T S+ T T +A T T+ + +
Sbjct: 3048 TSAPKTTAVPEATAAPETTSAPETTAAPETTSAPETTSVPETTSAPETTALPETTASPET 3107
Query: 830 XRNLWPSTSAMPLPHLIP 883
P T+ P +P
Sbjct: 3108 TAK--PDTTGAPETTFVP 3123
>SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35)
Length = 1577
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 556 ASTAQYHRSTRESLPTSAESDTPKQHQCCQTSNIRPT 666
+ T Y S R S P S SD+P TSN+ P+
Sbjct: 39 SDTDSYENSYRHSDPLSPRSDSPASISSAGTSNMPPS 75
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 28.3 bits (60), Expect = 8.9
Identities = 29/119 (24%), Positives = 41/119 (34%), Gaps = 5/119 (4%)
Frame = +2
Query: 500 IPFSTSLTAPA--ENNMPVWELQQPNITGVQESPFRLQLXXXXXXXXXVA--KLPTSAPR 667
+PF S+T P E P + TG+ SP+ L KL
Sbjct: 542 LPF-LSITLPEWFEKKFPEKIKNLRHSTGILTSPYDLYATFKHLMTFSKPQEKLQYGVSL 600
Query: 668 TNAIPTSVAYSHTQRPEIFCPAHTWSSAIT-KXRIYTAAATVTDNTNYTSNASQCXRNL 841
+ +P + T P+ +CP HTW + T I A + N SQ L
Sbjct: 601 FDVLPENRKCPDTGIPDHWCPCHTWRNIDTGSAHIKEGARVIVQYINAQLENSQLSAKL 659
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,203,244
Number of Sequences: 59808
Number of extensions: 558638
Number of successful extensions: 2095
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2574115416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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