Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H09
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U44378-1|AAA91041.1| 552|Homo sapiens Dpc4 protein. 33 1.9
BC002379-1|AAH02379.1| 552|Homo sapiens SMAD family member 4 pr... 33 1.9
AF045447-1|AAC03051.1| 552|Homo sapiens deleted in pancreatic c... 33 1.9
AB043547-1|BAB40977.1| 436|Homo sapiens SMAD4 protein. 33 1.9
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 32 3.2
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 32 3.2
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein. 32 3.2
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein. 31 5.7
AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant, at... 31 5.7
AF071172-1|AAD08657.1| 4834|Homo sapiens HERC2 protein. 31 5.7
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 31 7.5
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 31 7.5
U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein. 31 7.5
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 31 7.5
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 31 7.5
BC151244-1|AAI51245.1| 1039|Homo sapiens FERM domain containing ... 31 7.5
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 31 7.5
AL365495-1|CAI13296.1| 1039|Homo sapiens novel protein (FLJ10210... 31 7.5
AL157392-5|CAI13127.1| 1039|Homo sapiens novel protein (FLJ10210... 31 7.5
AF238317-1|AAG40630.1| 256|Homo sapiens HZFw3 protein protein. 31 7.5
AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein. 31 7.5
>U44378-1|AAA91041.1| 552|Homo sapiens Dpc4 protein.
Length = 552
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +3
Query: 624 QTTPMLPNFQHPPHEQMQYRPQLPIH------IHNDLRSFVPPTLGVQPSPXF 764
+T P PN H + +Q+ P +P H +HN+L +F PP + P+P +
Sbjct: 272 RTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNEL-AFQPP-ISNHPAPEY 322
>BC002379-1|AAH02379.1| 552|Homo sapiens SMAD family member 4
protein.
Length = 552
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +3
Query: 624 QTTPMLPNFQHPPHEQMQYRPQLPIH------IHNDLRSFVPPTLGVQPSPXF 764
+T P PN H + +Q+ P +P H +HN+L +F PP + P+P +
Sbjct: 272 RTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNEL-AFQPP-ISNHPAPEY 322
>AF045447-1|AAC03051.1| 552|Homo sapiens deleted in pancreatic
carcinoma protein.
Length = 552
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +3
Query: 624 QTTPMLPNFQHPPHEQMQYRPQLPIH------IHNDLRSFVPPTLGVQPSPXF 764
+T P PN H + +Q+ P +P H +HN+L +F PP + P+P +
Sbjct: 272 RTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNEL-AFQPP-ISNHPAPEY 322
>AB043547-1|BAB40977.1| 436|Homo sapiens SMAD4 protein.
Length = 436
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +3
Query: 624 QTTPMLPNFQHPPHEQMQYRPQLPIH------IHNDLRSFVPPTLGVQPSPXF 764
+T P PN H + +Q+ P +P H +HN+L +F PP + P+P +
Sbjct: 272 RTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNEL-AFQPP-ISNHPAPEY 322
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTS--AISNPNIMQMNNIPFSTSLTAPA 532
P PA ++ P+ +PRQ + + T+ I++P ++ M++ P TS + PA
Sbjct: 3058 PVPADSRAPLQKPRQTSLADLEQKVPTNYEVIASP-VVPMSSAPSETSYSGPA 3109
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTS--AISNPNIMQMNNIPFSTSLTAPA 532
P PA ++ P+ +PRQ + + T+ I++P ++ M++ P TS + PA
Sbjct: 3133 PVPADSRAPLQKPRQTSLADLEQKVPTNYEVIASP-VVPMSSAPSETSYSGPA 3184
>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
Length = 1571
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTS--AISNPNIMQMNNIPFSTSLTAPA 532
P PA ++ P+ +PRQ + + T+ I++P ++ M++ P TS + PA
Sbjct: 778 PVPADSRAPLQKPRQTSLADLEQKVPTNYEVIASP-VVPMSSAPSETSYSGPA 829
>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
Length = 1006
Score = 31.1 bits (67), Expect = 5.7
Identities = 21/85 (24%), Positives = 27/85 (31%)
Frame = +3
Query: 621 PQTTPMLPNFQHPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSPXFESXXXXXXXXXX 800
PQ P P QH PH Q Q+ I + R PPT QP S
Sbjct: 754 PQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPT-HAQPGLVSSSATQYGAHEQT 812
Query: 801 XXXXXXXANVXATFGHQHQPCHFRT 875
++ + H + H T
Sbjct: 813 HAMYVSTGSLAQQYAHPNATLHPHT 837
>AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant,
ataxin 2) protein.
Length = 258
Score = 31.1 bits (67), Expect = 5.7
Identities = 21/85 (24%), Positives = 27/85 (31%)
Frame = +3
Query: 621 PQTTPMLPNFQHPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSPXFESXXXXXXXXXX 800
PQ P P QH PH Q Q+ I + R PPT QP S
Sbjct: 62 PQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPT-HAQPGLVSSSATQYGAHEQT 120
Query: 801 XXXXXXXANVXATFGHQHQPCHFRT 875
++ + H + H T
Sbjct: 121 HAMYVSTGSLAQQYAHPNATLHPHT 145
>AF071172-1|AAD08657.1| 4834|Homo sapiens HERC2 protein.
Length = 4834
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1
Query: 704 YVNRQLRSVLHLFVGRMLEVWQHWCCLGVSDSAEVG 597
Y+N QLRS+ H FVGR E Q S++ EVG
Sbjct: 2166 YINSQLRSITHSFVGRPSEGAQLEDYFPDSENPEVG 2201
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWEL 559
P P +P W+ +Q + + A S P Q N +T+ T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 560 QQ 565
QQ
Sbjct: 547 QQ 548
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWEL 559
P P +P W+ +Q + + A S P Q N +T+ T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 560 QQ 565
QQ
Sbjct: 547 QQ 548
>U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein.
Length = 2861
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 368 PKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQM 493
P P+ + P W P QP A + + Q+ + S+ NI M
Sbjct: 2279 PPGSPSLSDTTPPCWSPLQPRARQRQTRCQSESSSSSNISTM 2320
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWEL 559
P P +P W+ +Q + + A S P Q N +T+ T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 560 QQ 565
QQ
Sbjct: 547 QQ 548
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWEL 559
P P +P W+ +Q + + A S P Q N +T+ T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 560 QQ 565
QQ
Sbjct: 547 QQ 548
>BC151244-1|AAI51245.1| 1039|Homo sapiens FERM domain containing 4A
protein.
Length = 1039
Score = 30.7 bits (66), Expect = 7.5
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +1
Query: 415 ASSTECRKNTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRES 594
AS E + +H SS SD SQY Q F+ T Q A++A +S R S
Sbjct: 937 ASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMC--KATSAALPQSQRSS 994
Query: 595 LPTSAESDTP 624
P+S TP
Sbjct: 995 TPSSEIGATP 1004
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 380 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWEL 559
P P +P W+ +Q + + A S P Q N +T+ T+ ++P W+
Sbjct: 116 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 172
Query: 560 QQ 565
QQ
Sbjct: 173 QQ 174
>AL365495-1|CAI13296.1| 1039|Homo sapiens novel protein (FLJ10210)
protein.
Length = 1039
Score = 30.7 bits (66), Expect = 7.5
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +1
Query: 415 ASSTECRKNTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRES 594
AS E + +H SS SD SQY Q F+ T Q A++A +S R S
Sbjct: 937 ASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMC--KATSAALPQSQRSS 994
Query: 595 LPTSAESDTP 624
P+S TP
Sbjct: 995 TPSSEIGATP 1004
>AL157392-5|CAI13127.1| 1039|Homo sapiens novel protein (FLJ10210)
protein.
Length = 1039
Score = 30.7 bits (66), Expect = 7.5
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +1
Query: 415 ASSTECRKNTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRES 594
AS E + +H SS SD SQY Q F+ T Q A++A +S R S
Sbjct: 937 ASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMC--KATSAALPQSQRSS 994
Query: 595 LPTSAESDTP 624
P+S TP
Sbjct: 995 TPSSEIGATP 1004
>AF238317-1|AAG40630.1| 256|Homo sapiens HZFw3 protein protein.
Length = 256
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 555 SFNSPISQEYKRVPSDFS*IRHPQTTPMLPNFQHPPHEQMQYRPQLPIHI 704
+F P S+ +PS + P T +LP+F H H LPI I
Sbjct: 199 TFPRPCSKPNPFLPSGSQNLLSPTATTVLPDFSHSNHSSCNGEQALPISI 248
>AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein.
Length = 1051
Score = 30.7 bits (66), Expect = 7.5
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +1
Query: 415 ASSTECRKNTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRES 594
AS E + +H SS SD SQY Q F+ T Q A++A +S R S
Sbjct: 949 ASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMC--KATSAALPQSQRSS 1006
Query: 595 LPTSAESDTP 624
P+S TP
Sbjct: 1007 TPSSEIGATP 1016
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,223,695
Number of Sequences: 237096
Number of extensions: 2685720
Number of successful extensions: 6747
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6734
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -