BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H09
(896 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M59501-1|AAA28994.1| 462|Drosophila melanogaster tube protein p... 36 0.075
AY061215-1|AAL28763.1| 462|Drosophila melanogaster LD16174p pro... 36 0.075
AE014297-74|AAF52136.3| 462|Drosophila melanogaster CG10520-PA ... 36 0.075
AF223065-1|AAF34688.1| 823|Drosophila melanogaster putative mic... 33 0.53
AY118567-1|AAM49936.1| 971|Drosophila melanogaster LD40170p pro... 31 1.6
AE014134-403|AAN10428.1| 971|Drosophila melanogaster CG9866-PB,... 31 1.6
AE014134-402|AAF51260.1| 971|Drosophila melanogaster CG9866-PA,... 31 1.6
BT012305-1|AAS77430.1| 255|Drosophila melanogaster LP21877p pro... 30 3.7
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA... 30 3.7
AE013599-2588|AAM68478.1| 614|Drosophila melanogaster CG30110-P... 30 3.7
AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA... 30 4.9
AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB... 30 4.9
AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC... 30 4.9
AE014297-504|AAS65118.1| 772|Drosophila melanogaster CG31481-PD... 30 4.9
AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain... 30 4.9
AY075401-1|AAL68231.1| 1326|Drosophila melanogaster LD30271p pro... 29 6.5
AY061300-1|AAL28848.1| 1326|Drosophila melanogaster LD21322p pro... 29 6.5
AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro... 29 6.5
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P... 29 6.5
AE014296-806|AAG22246.1| 1326|Drosophila melanogaster CG15010-PC... 29 6.5
AE014296-805|AAG22247.1| 1326|Drosophila melanogaster CG15010-PB... 29 6.5
AE014296-804|AAF47869.1| 1326|Drosophila melanogaster CG15010-PA... 29 6.5
AY069420-1|AAL39565.1| 514|Drosophila melanogaster LD13436p pro... 29 8.6
AL023874-7|CAA19643.1| 552|Drosophila melanogaster EG:100G10.1 ... 29 8.6
AE014298-449|AAF45812.1| 552|Drosophila melanogaster CG2685-PA ... 29 8.6
AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-P... 29 8.6
AE013599-476|AAF59211.1| 514|Drosophila melanogaster CG12042-PA... 29 8.6
>M59501-1|AAA28994.1| 462|Drosophila melanogaster tube protein
protein.
Length = 462
Score = 35.9 bits (79), Expect = 0.075
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = +2
Query: 329 NLIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPF 508
NL +IV + KSVP P+GN PI PR+ T+ T + + N+P
Sbjct: 207 NLDNFEKDIVR-RDKSVPQPSGNTPPIAPPRRQQRSTTNSNFATLTGTGTTSTTIPNVPN 265
Query: 509 STSLTAPAENNMPVWELQQPNI 574
T L + PV + + NI
Sbjct: 266 LTILNPSEQIQEPVLQPRPMNI 287
>AY061215-1|AAL28763.1| 462|Drosophila melanogaster LD16174p
protein.
Length = 462
Score = 35.9 bits (79), Expect = 0.075
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = +2
Query: 329 NLIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPF 508
NL +IV + KSVP P+GN PI PR+ T+ T + + N+P
Sbjct: 207 NLDNFEKDIVR-RDKSVPQPSGNTPPIAPPRRQQRSTTNSNFATLTGTGTTSTTIPNVPN 265
Query: 509 STSLTAPAENNMPVWELQQPNI 574
T L + PV + + NI
Sbjct: 266 LTILNPSEQIQEPVLQPRPMNI 287
>AE014297-74|AAF52136.3| 462|Drosophila melanogaster CG10520-PA
protein.
Length = 462
Score = 35.9 bits (79), Expect = 0.075
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = +2
Query: 329 NLIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPF 508
NL +IV + KSVP P+GN PI PR+ T+ T + + N+P
Sbjct: 207 NLDNFEKDIVR-RDKSVPQPSGNTPPIAPPRRQQRSTTNSNFATLTGTGTTSTTIPNVPN 265
Query: 509 STSLTAPAENNMPVWELQQPNI 574
T L + PV + + NI
Sbjct: 266 LTILNPSEQIQEPVLQPRPMNI 287
>AF223065-1|AAF34688.1| 823|Drosophila melanogaster putative
microtubule severingprotein katanin p80 subunit protein.
Length = 823
Score = 33.1 bits (72), Expect = 0.53
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Frame = +2
Query: 266 NANIYGDNCDFTVMKKRKANSNLIRVTNNIVPIK--PKSVPAPAGNKMPIWEP---RQPN 430
N I + ++ + + N NL +TNN P+ P+S P P+ ++ P+ P R N
Sbjct: 484 NPPILNNYDNYEMAEDFPVNQNLNYITNNYKPVPQPPRSTPRPSRSRRPLPPPLHKRTTN 543
Query: 431 AEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESP 595
Q T + Q++++ S+ ++NM + + N+ + P
Sbjct: 544 NMAGAKQTSTGIFGGSKLSQVSSV--SSMELHKLDDNMVLKKSSSSNVVNKNKRP 596
>AY118567-1|AAM49936.1| 971|Drosophila melanogaster LD40170p protein.
Length = 971
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 434 EKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITG 580
+K ++ + + SN NI MNNI S P+ N+ P W+ N G
Sbjct: 909 KKQLLRTLSDSSSNMNISNMNNISNLNSSNTPSANSNPPWKGNSSNPGG 957
>AE014134-403|AAN10428.1| 971|Drosophila melanogaster CG9866-PB,
isoform B protein.
Length = 971
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 434 EKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITG 580
+K ++ + + SN NI MNNI S P+ N+ P W+ N G
Sbjct: 909 KKQLLRTLSDSSSNMNISNMNNISNLNSSNTPSANSNPPWKGNSSNPGG 957
>AE014134-402|AAF51260.1| 971|Drosophila melanogaster CG9866-PA,
isoform A protein.
Length = 971
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 434 EKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITG 580
+K ++ + + SN NI MNNI S P+ N+ P W+ N G
Sbjct: 909 KKQLLRTLSDSSSNMNISNMNNISNLNSSNTPSANSNPPWKGNSSNPGG 957
>BT012305-1|AAS77430.1| 255|Drosophila melanogaster LP21877p
protein.
Length = 255
Score = 30.3 bits (65), Expect = 3.7
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 308 KKRKANSNLIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISN---P 478
KK +S+ + N V +K P GN + + EP + T + + I P
Sbjct: 99 KKFWQHSDSEKYQRNFVDLKTNGSNKPEGNLVNVMEPNSHKSSNTPKNSTKNIIRKIVVP 158
Query: 479 NIMQMNNIPFSTSLTAPAENN 541
NI+++NN T +N
Sbjct: 159 NILKINNPTVKIPATGIVHSN 179
>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
protein.
Length = 1542
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 651 QHPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
QH H+Q + Q H H +PPTL QPSP
Sbjct: 459 QHQQHQQQHIQQQ---HQHQQQHQPLPPTLQQQPSP 491
>AE013599-2588|AAM68478.1| 614|Drosophila melanogaster CG30110-PA
protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.7
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 308 KKRKANSNLIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISN---P 478
KK +S+ + N V +K P GN + + EP + T + + I P
Sbjct: 99 KKFWQHSDSEKYQRNFVDLKTNGSNKPEGNLVNVMEPNSHKSSNTPKNSTKNIIRKIVVP 158
Query: 479 NIMQMNNIPFSTSLTAPAENN 541
NI+++NN T +N
Sbjct: 159 NILKINNPTVKIPATGIVHSN 179
>AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA,
isoform A protein.
Length = 782
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 654 HPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
HP H Q+ + PIH H++ + +P +GV P P
Sbjct: 688 HPHHVQVPAQAHAPIHAHHN-SAAIPGGVGVGPPP 721
>AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB,
isoform B protein.
Length = 777
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 654 HPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
HP H Q+ + PIH H++ + +P +GV P P
Sbjct: 683 HPHHVQVPAQAHAPIHAHHN-SAAIPGGVGVGPPP 716
>AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC,
isoform C protein.
Length = 777
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 654 HPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
HP H Q+ + PIH H++ + +P +GV P P
Sbjct: 683 HPHHVQVPAQAHAPIHAHHN-SAAIPGGVGVGPPP 716
>AE014297-504|AAS65118.1| 772|Drosophila melanogaster CG31481-PD,
isoform D protein.
Length = 772
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 654 HPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
HP H Q+ + PIH H++ + +P +GV P P
Sbjct: 678 HPHHVQVPAQAHAPIHAHHN-SAAIPGGVGVGPPP 711
>AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain
protein protein.
Length = 782
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 654 HPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
HP H Q+ + PIH H++ + +P +GV P P
Sbjct: 688 HPHHVQVPAQAHAPIHAHHN-SAAIPGGVGVGPPP 721
>AY075401-1|AAL68231.1| 1326|Drosophila melanogaster LD30271p
protein.
Length = 1326
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 601 TSAESDTPKQHQCCQTSNIRPTNKCNTDLSCL 696
+S S T ++ C +T+ I PT C+T +CL
Sbjct: 536 SSVGSQTSQESGCSRTTAINPTAACSTGSACL 567
>AY061300-1|AAL28848.1| 1326|Drosophila melanogaster LD21322p
protein.
Length = 1326
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 601 TSAESDTPKQHQCCQTSNIRPTNKCNTDLSCL 696
+S S T ++ C +T+ I PT C+T +CL
Sbjct: 536 SSVGSQTSQESGCSRTTAINPTAACSTGSACL 567
>AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p protein.
Length = 1371
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 407 IWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWE 556
I++ +P + H+ +QTSA + ++MQ P +T L + P E
Sbjct: 1046 IYKHSEPKIRRIHITSQTSAENGISLMQGQESPTTTQLLSSVPTAQPTVE 1095
>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
isoform B protein.
Length = 2133
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 618 HP--QTTPMLPNFQHPPHEQMQYRPQLPIHIHN 710
HP Q P P+ Q P H+Q + PQ PIH H+
Sbjct: 16 HPSMQHHPTHPHHQQPHHQQ-PHHPQQPIHQHH 47
>AE014296-806|AAG22246.1| 1326|Drosophila melanogaster CG15010-PC,
isoform C protein.
Length = 1326
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 601 TSAESDTPKQHQCCQTSNIRPTNKCNTDLSCL 696
+S S T ++ C +T+ I PT C+T +CL
Sbjct: 536 SSVGSQTSQESGCSRTTAINPTAACSTGSACL 567
>AE014296-805|AAG22247.1| 1326|Drosophila melanogaster CG15010-PB,
isoform B protein.
Length = 1326
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 601 TSAESDTPKQHQCCQTSNIRPTNKCNTDLSCL 696
+S S T ++ C +T+ I PT C+T +CL
Sbjct: 536 SSVGSQTSQESGCSRTTAINPTAACSTGSACL 567
>AE014296-804|AAF47869.1| 1326|Drosophila melanogaster CG15010-PA,
isoform A protein.
Length = 1326
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 601 TSAESDTPKQHQCCQTSNIRPTNKCNTDLSCL 696
+S S T ++ C +T+ I PT C+T +CL
Sbjct: 536 SSVGSQTSQESGCSRTTAINPTAACSTGSACL 567
>AY069420-1|AAL39565.1| 514|Drosophila melanogaster LD13436p
protein.
Length = 514
Score = 29.1 bits (62), Expect = 8.6
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 451 SSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRESL-PTSAESD--- 618
S+ L +I S ++ N FDC C + AST R + E+ P +S
Sbjct: 49 SNCLENIPSTEARHKKNCCANCFDCPCCQHTLSARASTVPVVRKSEEAKEPKDGDSKGEA 108
Query: 619 TPKQHQCCQTSNIRPTNKCNTDLSCLFTYTTT*DL 723
TP + S + PT K LSCL TT D+
Sbjct: 109 TPPVPASSKPSAV-PTTKKMYYLSCLSCRWTTRDV 142
>AL023874-7|CAA19643.1| 552|Drosophila melanogaster EG:100G10.1
protein.
Length = 552
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 621 PQTTPMLPNFQHPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
P T P LP PP + PQLP H+ + + PP + +P P
Sbjct: 366 PPTAPTLPTIPLPPASSVPAPPQLP-HL-PPIPNLGPPGIMYRPPP 409
>AE014298-449|AAF45812.1| 552|Drosophila melanogaster CG2685-PA
protein.
Length = 552
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 621 PQTTPMLPNFQHPPHEQMQYRPQLPIHIHNDLRSFVPPTLGVQPSP 758
P T P LP PP + PQLP H+ + + PP + +P P
Sbjct: 366 PPTAPTLPTIPLPPASSVPAPPQLP-HL-PPIPNLGPPGIMYRPPP 409
>AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-PA
protein.
Length = 2294
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 344 TNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISN--PNIMQMNNIPFSTS 517
+N + P P+ + +PA P P NA++ H++ Q N ++M P S
Sbjct: 632 SNMLPPQSPRQLQSPAPQMTPPPPPSPQNAQQQHLRQQQQMQQNRQQHMMGSPQQPQPQS 691
Query: 518 LTAPAENNMPVWELQQP 568
+ +P + + QQP
Sbjct: 692 MMSP-QQQQQMQPFQQP 707
>AE013599-476|AAF59211.1| 514|Drosophila melanogaster CG12042-PA
protein.
Length = 514
Score = 29.1 bits (62), Expect = 8.6
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 451 SSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRESL-PTSAESD--- 618
S+ L +I S ++ N FDC C + AST R + E+ P +S
Sbjct: 49 SNCLENIPSTEARHKKNCCANCFDCPCCQHTLSARASTVPVVRKSEEAKEPKDGDSKGEA 108
Query: 619 TPKQHQCCQTSNIRPTNKCNTDLSCLFTYTTT*DL 723
TP + S + PT K LSCL TT D+
Sbjct: 109 TPPVPASSKPSAV-PTTKKMYYLSCLSCRWTTRDV 142
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,121,294
Number of Sequences: 53049
Number of extensions: 846472
Number of successful extensions: 3336
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3324
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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