Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H09
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF047653-2|AAC04459.1|  388|Caenorhabditis elegans Hypothetical ...    30   2.0  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF000194-2|AAK39380.1|  202|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical
           protein F54D8.6 protein.
          Length = 783

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +2

Query: 332 LIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFS 511
           L ++  N   I P ++P P     PI  P  PNA    +    + +S P   +   IP +
Sbjct: 242 LQKIPKNPQQIAPVTIPPPVVMPPPIVIPGMPNAPA--VTEVLNLVSLPLNAKPVPIPIA 299

Query: 512 TSLTAPAENNMPVWELQQPNITGV 583
           +S+ AP     P   L  PN+  +
Sbjct: 300 SSVIAPNYATAPPIALTDPNVASI 323


>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical protein
            ZC247.1 protein.
          Length = 4404

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 686  SVAYSHTQRPEIFCPAHTWSSAITKXRI-YTAAATVTDNTNYTSNASQCXRNLWPSTSAM 862
            ++ +SH+   +     HTW++      + Y    TVT +T+Y  N +   R+  P  +  
Sbjct: 4151 NLIHSHSSPRQRRLSPHTWTTVRETSEVSYIKRVTVTSSTDYGKNQATLRRDRSPIQAVA 4210

Query: 863  PLPHLIPS 886
               H  PS
Sbjct: 4211 RHVHSFPS 4218


>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical protein
            ZC247.1 protein.
          Length = 4404

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 686  SVAYSHTQRPEIFCPAHTWSSAITKXRI-YTAAATVTDNTNYTSNASQCXRNLWPSTSAM 862
            ++ +SH+   +     HTW++      + Y    TVT +T+Y  N +   R+  P  +  
Sbjct: 4151 NLIHSHSSPRQRRLSPHTWTTVRETSEVSYIKRVTVTSSTDYGKNQATLRRDRSPIQAVA 4210

Query: 863  PLPHLIPS 886
               H  PS
Sbjct: 4211 RHVHSFPS 4218


>Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical
           protein C06G8.1 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 402 ILFPAGAGTLLGFIGTILFVTLMR 331
           ++FP G G+LL FI  +LF+ L R
Sbjct: 188 LIFPNGVGSLLAFIQLLLFIVLPR 211


>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
            protein ZC247.1 protein.
          Length = 4404

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 686  SVAYSHTQRPEIFCPAHTWSSAITKXRI-YTAAATVTDNTNYTSNASQCXRNLWPSTSAM 862
            ++ +SH+   +     HTW++      + Y    TVT +T+Y  N +   R+  P  +  
Sbjct: 4151 NLIHSHSSPRQRRLSPHTWTTVRETSEVSYIKRVTVTSSTDYGKNQATLRRDRSPIQAVA 4210

Query: 863  PLPHLIPS 886
               H  PS
Sbjct: 4211 RHVHSFPS 4218


>AF047653-2|AAC04459.1|  388|Caenorhabditis elegans Hypothetical
           protein W02F12.3 protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
 Frame = +2

Query: 251 RYILKNANIYGDNCDFTVMKKRKANSNLIRVTNNIVPIKPKSVPAPAGNK---MPIWEPR 421
           R +++N++I   + +F + +  +   + +  T+   P    S P PAGN+   MP   PR
Sbjct: 22  RQMIENSHIIPSS-EFNIFRSARMAGDDVPSTSGAPP-GSSSAPTPAGNQVAPMPATRPR 79

Query: 422 QPNAEKTHMQAQTSAI---------SN--PNIMQMNNIPFSTSLT-APAENNMPVWELQQ 565
           +  ++       ++ I         SN   N  +  N+P + ++T    + + PV +LQ 
Sbjct: 80  EAESQNAAQPGLSTQIWRAICPLCGSNRVSNTEENTNVPVTGNVTPRDVQTDQPVADLQS 139

Query: 566 PNIT 577
           P ++
Sbjct: 140 PPLS 143


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
 Frame = +2

Query: 638 VAKLPTSAPRTNAIPTSV-AYSHTQRPEIFCPAHTWSSAITKXRIYTAAATVTDNTNYTS 814
           V   PT AP+T+A PT+   ++   +P    P  T +S        T     T  +  T 
Sbjct: 533 VTSTPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTNSVTPSTGTTTVPVPTTTGSPTTQ 592

Query: 815 NASQCXRNLWPSTSAMPLP 871
             +   +   PS++    P
Sbjct: 593 TTAPVTKPTVPSSTTQTAP 611


>U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical
           protein B0207.1 protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 359 PIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISN-PNIMQM 493
           P+K   +P P GN  P+ +P+ P  ++T  Q     + + P I QM
Sbjct: 93  PVKTPPLPRPPGNLNPVQQPQIP-VQRTPPQCPPPPVPHPPQITQM 137


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
           protein T28C6.9 protein.
          Length = 1861

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 568 QYHRSTRESLPTSAESDTPKQHQCCQTSNIRPTNKCN 678
           Q  R    S P   +SDT K H+  ++SN  P    N
Sbjct: 579 QETRILTSSSPLGNQSDTQKSHEAVESSNTNPQKDTN 615


>U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical
           protein K03C7.1 protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 359 PIKPKSVPAPAGNKMPIWE--PRQPNAEKT 442
           P KP   P PA  K P WE  P +P A+ T
Sbjct: 130 PPKPADPPKPAALKKPPWEDDPDEPEADFT 159


>AF000194-2|AAK39380.1|  202|Caenorhabditis elegans Hypothetical
           protein ZC328.1 protein.
          Length = 202

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 624 QTTPMLPNFQHPPHEQMQYRPQLPIHIHNDLRSFV 728
           +  P+ PNF + PH++  Y P     +H    S++
Sbjct: 5   RVAPLPPNFVYSPHDKFYYAPATCNSMHYTTASYI 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,497,388
Number of Sequences: 27780
Number of extensions: 422847
Number of successful extensions: 1457
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)