Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H07
(930 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 140 1e-33
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 7e-15
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 66 3e-11
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 60 3e-09
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 55 7e-08
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 55 7e-08
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 45 1e-04
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 42 0.001
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.012
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.015
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 37 0.020
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12) 29 4.1
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 29 5.4
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 29 7.1
SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23) 28 9.4
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 28 9.4
SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 140 bits (340), Expect = 1e-33
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 562 DTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 741
D F+VRGGMRAVEFKV+ETDPSP+CIVAPDTVIHC+GEP+KREEEEE+LN VGYDDIGGC
Sbjct: 104 DMFLVRGGMRAVEFKVIETDPSPYCIVAPDTVIHCEGEPVKREEEEESLNEVGYDDIGGC 163
Query: 742 RKQLAQIKE 768
RKQLAQIKE
Sbjct: 164 RKQLAQIKE 172
Score = 126 bits (305), Expect = 2e-29
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = +1
Query: 142 DDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVC 321
D+L+TAIL+ K RPNRL+VEEAV+DDNSVV +SQAKME+LQLFRGDTVL+KGK+RK+TVC
Sbjct: 5 DELATAILKNKSRPNRLLVEEAVNDDNSVVTMSQAKMEELQLFRGDTVLIKGKKRKDTVC 64
Query: 322 IVLSDDNCPDEKIRMXXXXXXXXXXXXSDVV 414
IVLSDD D+KIRM DVV
Sbjct: 65 IVLSDDTISDDKIRMNRVVRMNLRVRLGDVV 95
Score = 51.6 bits (118), Expect = 9e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +1
Query: 685 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPE 864
RE E N V +DDIGG +++E+V+ P+ HP F G+ P +G+ G
Sbjct: 298 RETVVEVPN-VSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCG 356
Query: 865 KHSLARAVANETGAS 909
K LA+A+ANE A+
Sbjct: 357 KTLLAKAIANECQAN 371
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 78.6 bits (185), Expect = 7e-15
Identities = 41/87 (47%), Positives = 52/87 (59%)
Frame = +1
Query: 655 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRG 834
VIH G IK++ E A V + IGG + Q+ ++EM+E+PL +P LF A GV PPRG
Sbjct: 235 VIHPFGSVIKKDSE--AKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRG 292
Query: 835 ISCMGRLXPEKHSLARAVANETGASSF 915
I G K +ARAVANETG F
Sbjct: 293 ILLYGPSGTGKTMIARAVANETGVHFF 319
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V + D+GG ++KE VE PL+HP F+ +G+ PPRGI G K +ARA+A
Sbjct: 534 VHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALAT 593
Query: 895 ETG 903
E+G
Sbjct: 594 ESG 596
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 71.3 bits (167), Expect = 1e-12
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +1
Query: 655 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRG 834
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP L++ +G+ PP+G
Sbjct: 357 VLSDDADPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKG 416
Query: 835 ISCMGRLXPEKHSLARAVANETGAS 909
+ G+ K LA+AVAN+T A+
Sbjct: 417 VILYGQPGTGKTLLAKAVANQTSAT 441
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 66.5 bits (155), Expect = 3e-11
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V Y DIGGC++Q+ +++E+VE PL HP F +G+ PP+G+ G K ARAVAN
Sbjct: 81 VTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 140
Query: 895 ETGA 906
T A
Sbjct: 141 RTDA 144
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
Y+ +GG KQ+ +IKE++ELP++HP LF+A+G+ P+G+ G K LARAVA+ T
Sbjct: 176 YEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHT 235
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 59.7 bits (138), Expect = 3e-09
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +1
Query: 697 EEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSL 876
EE N V Y +IGG Q +I+E VELPL H L+K IG+ PPRG+ G K L
Sbjct: 156 EEKPN-VSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTML 214
Query: 877 ARAVANETGAS 909
A+AVA+ T A+
Sbjct: 215 AKAVAHHTTAA 225
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 55.2 bits (127), Expect = 7e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V +D +GG KQ+ +KEM+ PL +P +F + PPRG+ G K +ARA+AN
Sbjct: 881 VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALAN 940
Query: 895 E 897
E
Sbjct: 941 E 941
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 55.2 bits (127), Expect = 7e-08
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMG 849
+P+ E + Y D+GG +Q+ +++E++ELPL +P LF+ +G+ PP+G G
Sbjct: 118 DPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFG 176
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 706 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARA 885
L +DD+GG +++ +E PL HP F +G+ PRG+ G K +L RA
Sbjct: 478 LQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRA 537
Query: 886 VANET 900
A+ T
Sbjct: 538 AASST 542
Score = 34.7 bits (76), Expect = 0.11
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 730 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMG 849
+ G + +KE+V+ PL +P F +G+ P+GI +G
Sbjct: 213 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVG 252
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 706 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARA 885
L +DD+GG +++ +E PL HP F +G+ PRG+ G K +L RA
Sbjct: 7 LQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRA 66
Query: 886 VANET 900
A+ T
Sbjct: 67 AASST 71
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++V + DIGGC L Q+ +++ + + HP +F +GV P G G K LA A+
Sbjct: 672 SSVKFADIGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAI 730
Query: 889 ANE 897
A E
Sbjct: 731 AGE 733
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 781 PLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETG 903
P++HP F A+G+ P GI G K LA+A+ANE+G
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESG 42
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 781 PLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETG 903
P++HP F A+G+ P GI G K LA+A+ANE+G
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESG 42
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 37.5 bits (83), Expect = 0.015
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +1
Query: 757 QIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETGASSF 915
+++E+VE LR+P FK +G P G+ +G K LA+AVA E G F
Sbjct: 142 ELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFF 193
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 37.1 bits (82), Expect = 0.020
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 727 DIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETG 903
D+ GC + +I E V L++P + +G P+G G K LA+AVA E G
Sbjct: 49 DVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAGEAG 106
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 36.3 bits (80), Expect = 0.035
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +1
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGR 852
E ++R+ ++ N V + DI + ++E V LPL P F+ I P RG+ +G
Sbjct: 234 EALERDILQKNPN-VHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGP 291
Query: 853 LXPEKHSLARAVANETGASSF 915
K LA+AVA E G + F
Sbjct: 292 PGTGKTMLAKAVATECGTTFF 312
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 35.1 bits (77), Expect = 0.082
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
+ + D+GG +I + ++LPL HP LF A G+ G+ G K +A+AVA
Sbjct: 809 ISWKDVGGLDSVKEEILDTIQLPLLHPELF-AAGLR-RSGVLLYGPPGTGKTLMAKAVAT 866
Query: 895 E 897
E
Sbjct: 867 E 867
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 34.7 bits (76), Expect = 0.11
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 730 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMG 849
+ G + +KE+V+ PL +P F +G+ P+GI +G
Sbjct: 43 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVG 82
>SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)
Length = 672
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 196 VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDN 342
+EE + D +V+ S LQL R T +LK K ++ +++ D++
Sbjct: 141 IEERIEDSCFLVSTSTTNSTTLQLLRNMTGILKSDSDKVSIGVLVDDES 189
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 477 IINWQYVDSFS-IFH*RTRSYGYHIRKTHT 391
II W Y +S+ IFH TR +G H+ T T
Sbjct: 2525 IIAWVYPESWGPIFHYNTRGWGVHLWLTRT 2554
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANE 897
+ D+ G ++ ++ E V+ L+ + +G P+G +G K LA+AVA E
Sbjct: 124 FKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAKAVATE 181
>SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23)
Length = 172
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 682 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 777
KREEE E L + + C+K+L ++E++E
Sbjct: 63 KREEELELLLETRTEKLSECKKRLLDLEEIIE 94
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 682 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 777
KREEE E L + + C+K+L ++E++E
Sbjct: 664 KREEELELLLETRTEKLSECKKRLLDLEEIIE 695
>SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 667 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEM 771
D + + EEEEE +G+D+ G ++L +I+E+
Sbjct: 255 DDDETEDEEEEEEQPVMGWDEYGTSPQRLQRIREL 289
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,350,180
Number of Sequences: 59808
Number of extensions: 613487
Number of successful extensions: 1734
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2705204627
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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