Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H07
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 367 e-102
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 363 e-101
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 363 e-101
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 68 8e-12
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 66 3e-11
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 64 1e-10
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 64 1e-10
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 61 1e-09
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 57 2e-08
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 52 8e-07
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 52 8e-07
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 52 8e-07
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 52 8e-07
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 52 8e-07
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 52 8e-07
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 52 8e-07
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 44 2e-04
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 42 6e-04
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 40 0.003
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 36 0.031
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 36 0.031
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 32 0.51
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 32 0.51
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 30 2.1
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 29 3.6
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 29 3.6
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 29 3.6
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 4.7
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 4.7
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 6.3
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 367 bits (904), Expect = e-102
Identities = 167/261 (63%), Positives = 211/261 (80%)
Frame = +1
Query: 133 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 312
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 313 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 492
+V I++SD++CP+EK+RM DVVSI P P++ YG R+H+LPIDD++EGL
Sbjct: 73 SVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGL 132
Query: 493 TGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDG 672
TGNLF+V+LKPYF+EAYRP+H+ D F V+ MR VEFKVVET+P+P CIV+PDT+IH +G
Sbjct: 133 TGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEG 192
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGR 852
+PIKREEEEE++N +GYDD+GG RKQLAQIKEMVELPLRHP LFKAIG+ PPRGI G
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 853 LXPEKHSLARAVANETGASSF 915
K +ARAVANETG+ F
Sbjct: 253 PGTGKTLIARAVANETGSFFF 273
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 685 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPE 864
RE E N + DIGG + +++E+V+ P+ HP + G+ P RG+ G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query: 865 KHSLARAVANETGAS 909
K LA+A+ANE A+
Sbjct: 530 KTLLAKAIANECQAN 544
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 837 LMYGPPXTGKTLIGSXXXXXNRSFFFL 917
L++GPP TGKTLI SFFFL
Sbjct: 248 LLFGPPGTGKTLIARAVANETGSFFFL 274
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 363 bits (894), Expect = e-101
Identities = 173/261 (66%), Positives = 210/261 (80%)
Frame = +1
Query: 133 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 312
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 313 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 492
TV IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+LPIDD++EGL
Sbjct: 73 TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGL 131
Query: 493 TGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDG 672
TGNLF+V+L+PYF +AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G
Sbjct: 132 TGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEG 191
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGR 852
+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVELPLRHP LFKAIGV PPRGI G
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 853 LXPEKHSLARAVANETGASSF 915
K +ARAVANETGA F
Sbjct: 252 PGTGKTLIARAVANETGAFFF 272
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 685 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPE 864
RE E N + DIGG + +++E+V+ P+ HP + G+ P RG+ G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 865 KHSLARAVANETGAS 909
K LA+A+ANE A+
Sbjct: 529 KTLLAKAIANECQAN 543
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 837 LMYGPPXTGKTLIGSXXXXXNRSFFFL 917
L++GPP TGKTLI +FFFL
Sbjct: 247 LLFGPPGTGKTLIARAVANETGAFFFL 273
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 363 bits (894), Expect = e-101
Identities = 173/261 (66%), Positives = 210/261 (80%)
Frame = +1
Query: 133 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 312
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 313 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 492
TV IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+LPIDD++EGL
Sbjct: 73 TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGL 131
Query: 493 TGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDG 672
TGNLF+V+L+PYF +AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G
Sbjct: 132 TGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEG 191
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGR 852
+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVELPLRHP LFKAIGV PPRGI G
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 853 LXPEKHSLARAVANETGASSF 915
K +ARAVANETGA F
Sbjct: 252 PGTGKTLIARAVANETGAFFF 272
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 685 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPE 864
RE E N + DIGG + +++E+V+ P+ HP + G+ P RG+ G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 865 KHSLARAVANETGAS 909
K LA+A+ANE A+
Sbjct: 529 KTLLAKAIANECQAN 543
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 837 LMYGPPXTGKTLIGSXXXXXNRSFFFL 917
L++GPP TGKTLI +FFFL
Sbjct: 247 LLFGPPGTGKTLIARAVANETGAFFFL 273
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 68.1 bits (159), Expect = 8e-12
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
+DDIGGC Q+ ++KE VELPL HP ++ +G+ P+G+ G K LA+AVAN T
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANST 241
Query: 901 GAS 909
A+
Sbjct: 242 SAT 244
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +1
Query: 655 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRG 834
V+ D +P+ + E Y D+GG +Q+ +IKE VELPL HP ++ +G+ PP+G
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKG 224
Query: 835 ISCMGRLXPEKHSLARAVANETGAS 909
+ G K LA+AVAN+T A+
Sbjct: 225 VILYGCPGTGKTLLAKAVANQTSAT 249
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +1
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGR 852
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G G
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 184
Query: 853 LXPEKHSLARAVANE 897
K LARAVA++
Sbjct: 185 PGTGKTLLARAVASQ 199
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +1
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGR 852
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G G
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 192
Query: 853 LXPEKHSLARAVANE 897
K LARAVA++
Sbjct: 193 PGTGKTLLARAVASQ 207
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+ G K LARAVA+ T
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V Y D+GGC+ Q+ +++E+VE PL HP + +G+ PP+G+ G K ARAVAN
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
Query: 895 ETGA 906
T A
Sbjct: 234 RTDA 237
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 61.3 bits (142), Expect = 1e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
+ Y DIGG Q +++E VELPL H L++ IG+ PPRG+ G K LA+AVA
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217
Query: 895 ETGAS 909
T AS
Sbjct: 218 NTAAS 222
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 61.3 bits (142), Expect = 1e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+ G K LARAVA+ T
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 212
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 61.3 bits (142), Expect = 1e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+ G K LARAVA+ T
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
Y DIGGC KQ+ ++ E V LP+ H F +G+ PP+G+ G K +ARAVA +T
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQT 235
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 837 LMYGPPXTGKTLIGSXXXXXNRSFF 911
LMYGPP TGKT++ +S F
Sbjct: 215 LMYGPPGTGKTMMARAVAAQTKSTF 239
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++VG+D +GG + +KE+V P+ +P +F+ + PP+G+ G K +ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 889 ANE 897
ANE
Sbjct: 446 ANE 448
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++VG+D +GG + +KE+V P+ +P +F+ + PP+G+ G K +ARA+
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 443
Query: 889 ANE 897
ANE
Sbjct: 444 ANE 446
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++VG+D +GG + +KE+V P+ +P +F+ + PP+G+ G K +ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 889 ANE 897
ANE
Sbjct: 446 ANE 448
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++VG+D +GG + +KE+V P+ +P +F+ + PP+G+ G K +ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 889 ANE 897
ANE
Sbjct: 446 ANE 448
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++VG+D +GG + +KE+V P+ +P +F+ + PP+G+ G K +ARA+
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 443
Query: 889 ANE 897
ANE
Sbjct: 444 ANE 446
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++VG+D +GG + +KE+V P+ +P +F+ + PP+G+ G K +ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 889 ANE 897
ANE
Sbjct: 446 ANE 448
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
++VG+D +GG + +KE+V P+ +P +F+ + PP+G+ G K +ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 889 ANE 897
ANE
Sbjct: 446 ANE 448
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V ++DIGG + +I++ V P +HP F+ G+ PP GI G K +ARA+A+
Sbjct: 456 VSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALAS 515
Query: 895 E 897
E
Sbjct: 516 E 516
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
+D+IGGC + +A++K+ + LPLR S + + PPRGI G K LA+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 901 G 903
G
Sbjct: 139 G 139
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +1
Query: 721 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANET 900
+D+IGGC + +A++K+ + LPLR S + + PPRGI G K LA+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 901 G 903
G
Sbjct: 142 G 142
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 697 EEALNAVGY--DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKH 870
+E L+ G DD+ GC A ++E V LP +P+LFK + P +GI G K
Sbjct: 167 DEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLR-QPVKGILLFGPPGNGKT 225
Query: 871 SLARAVANET 900
LA+AVA E+
Sbjct: 226 LLAKAVAGES 235
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 837 LMYGPPXTGKTLIGSXXXXXNRSFFF 914
L++GPP GKTL+ ++ FF
Sbjct: 215 LLFGPPGNGKTLLAKAVAGESKQMFF 240
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVX-PPRGISCMG 849
+P + E + V +DDIG + Q++ + P++ F A+G+ P+GI G
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCG 575
Query: 850 RLXPEKHSLARAVANETGASSF 915
K LA+AVANETG + F
Sbjct: 576 PPGCGKTLLAKAVANETGMNFF 597
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V ++ IGG +Q ++ + + L+ P F +GV PPRG G K A+AVA
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAG 261
Query: 895 E 897
E
Sbjct: 262 E 262
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 673 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGV-XPPRGISCMG 849
+P + E + V +DDIG + Q++ + P++ F A+G+ P+GI G
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCG 575
Query: 850 RLXPEKHSLARAVANETG 903
K LA+AVANETG
Sbjct: 576 PPGCGKTLLAKAVANETG 593
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V ++ IGG +Q ++ + + L+ P F +GV PPRG G K A+AVA
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAG 261
Query: 895 E 897
E
Sbjct: 262 E 262
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = +1
Query: 715 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVAN 894
V + DI G +KE V LP++ P LF P +GI G K +A+AVA
Sbjct: 115 VKWTDIAGLEGAKEALKEAVILPIKFPQLFTG-NRKPWQGILLFGPPGTGKSYIAKAVAT 173
Query: 895 ETGASSF 915
E G S+F
Sbjct: 174 EAGESTF 180
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 36.3 bits (80), Expect = 0.031
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 724 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETG 903
+D+GG +Q +++++ P ++P LF+++GV +GI G K LA A + +
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 904 AS 909
S
Sbjct: 62 FS 63
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 36.3 bits (80), Expect = 0.031
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 724 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETG 903
+D+GG +Q +++++ P ++P LF+++GV +GI G K LA A + +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 904 AS 909
S
Sbjct: 788 FS 789
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 36.3 bits (80), Expect = 0.031
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 724 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETG 903
+D+GG +Q +++++ P ++P LF+++GV +GI G K LA A + +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 904 AS 909
S
Sbjct: 788 FS 789
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
N + DDI G + E V LPL P F+ + P + + G K +ARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 889 ANETGASSF 915
A+E+ ++ F
Sbjct: 247 ASESSSTFF 255
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
N + DDI G + E V LPL P F+ + P + + G K +ARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 889 ANETGASSF 915
A+E+ ++ F
Sbjct: 247 ASESSSTFF 255
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 709 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAV 888
N + DDI G + E V LPL P F+ + P + + G K +ARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 889 ANETGASSF 915
A+E+ ++ F
Sbjct: 247 ASESSSTFF 255
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 837 LMYGPPXTGKTLIGSXXXXXNRSFFF 914
L++GPP TGKT+IG ++ FF
Sbjct: 353 LLFGPPGTGKTMIGRCVASQCKATFF 378
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 757 QIKEMVELPLRHPSLFKAIGVXPPRGISCMGRLXPEKHSLARAVANETGASSF 915
+++E+V+ L+ P + +G P+G+ +G K LARA+A E F
Sbjct: 212 EVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFF 263
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 612 DHFELDGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 505
D+ + D PPD GVVT ++ S++ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 612 DHFELDGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 505
D+ + D PPD GVVT ++ S++ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +2
Query: 122 WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSKAN 301
W + + R RSS+ +DP +S S S T+ S K S S + S + +
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115
Query: 302 AARKPFASCSQMIIALMR 355
A +P S + L R
Sbjct: 116 PANRPSLHSSTSPVTLQR 133
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +2
Query: 122 WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSKAN 301
W + + R RSS+ +DP +S S S T+ S K S S + S + +
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115
Query: 302 AARKPFASCSQMIIALMR 355
A +P S + L R
Sbjct: 116 PANRPSLHSSTSPVTLQR 133
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 616 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 726
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,426,141
Number of Sequences: 27780
Number of extensions: 456465
Number of successful extensions: 1245
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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