Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_H03
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.37 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -3

Query: 477 ILPLFY*LLKIFMFICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL 325
           +L ++Y    + + +C+ Y+CR     F++    + C + SL+ L  T +L
Sbjct: 282 LLCIYYFYCALIILLCIYYFCR----AFIIFPTHFYC-AFSLYPLKSTFYL 327



 Score = 25.4 bits (53), Expect = 0.49
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -3

Query: 477 ILPLFY*LLKIFMFICLRY-YCRYFC----CIFVLAAKQYPCFSISLFGLTITSFL*YFF 313
           +L ++Y ++ +F  +C+ Y YC +       +F+L    + C  I +F + +     + F
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI-IFTMHLLFCCAFIF 188

Query: 312 LKLYRSISLC-STTTLYLI 259
             ++    LC    TL+L+
Sbjct: 189 FNMHLLFLLCLDYFTLHLL 207


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 528 LVSSVSKVLRQRTKDTLHLLPCW 596
           L S + KVL ++ K +  L  CW
Sbjct: 212 LTSKIYKVLEEKYKTSGSLYTCW 234


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 273 TLYLILFVFL*FRTVD*SFSLLEYVD 196
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 273 TLYLILFVFL*FRTVD*SFSLLEYVD 196
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 438 FICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL*YFFL 310
           F+CL  +      I+ L ++    FS    GLTI + L  F L
Sbjct: 290 FLCLYLFLIITLTIYGLLSQLQAGFSTKDIGLTINAGLAIFIL 332


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 123 SGSTAHNHYANDGDKYYFC 67
           SGS + + + +D  KYY C
Sbjct: 166 SGSFSRHAHPDDCRKYYIC 184


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 123 SGSTAHNHYANDGDKYYFC 67
           SGS + + + +D  KYY C
Sbjct: 166 SGSFSRHAHPDDCRKYYIC 184


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +3

Query: 51  FENVFYKNSIYRHHLHNDCELCF 119
           +EN FY+         N C  CF
Sbjct: 675 YENKFYRQEAQWTSSDNPCTTCF 697


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,049
Number of Sequences: 336
Number of extensions: 3173
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)