Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H02
(838 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y3I0 Cluster: UPF0027 protein C22orf28; n=54; Eukaryo... 392 e-108
UniRef50_UPI0000499389 Cluster: conserved hypothetical protein; ... 189 9e-47
UniRef50_A2FSC4 Cluster: Putative uncharacterized protein; n=7; ... 186 5e-46
UniRef50_Q6LXF9 Cluster: UPF0027 protein MMP1392; n=9; cellular ... 170 4e-41
UniRef50_Q8ZY09 Cluster: UPF0027 protein PAE0998; n=26; cellular... 167 3e-40
UniRef50_Q5XQ66 Cluster: Putative uncharacterized protein; n=5; ... 158 1e-37
UniRef50_Q5ZTG1 Cluster: Replication factor C subunit; n=17; Bac... 149 6e-35
UniRef50_Q8SWJ2 Cluster: Putative uncharacterized protein ECU01_... 148 1e-34
UniRef50_A1I791 Cluster: RtcB protein; n=6; cellular organisms|R... 148 2e-34
UniRef50_Q8KET1 Cluster: Putative uncharacterized protein; n=5; ... 138 2e-31
UniRef50_Q6L1G2 Cluster: RtcB protein; n=3; cellular organisms|R... 138 2e-31
UniRef50_Q978S0 Cluster: Putative uncharacterized protein TVG139... 130 3e-29
UniRef50_A2RQD0 Cluster: RtcB like protein; n=3; root|Rep: RtcB ... 129 1e-28
UniRef50_P71930 Cluster: UPF0027 protein Rv2631/MT2707; n=19; ce... 123 5e-27
UniRef50_Q30ZL0 Cluster: Putative uncharacterized protein; n=1; ... 119 8e-26
UniRef50_Q2AIS2 Cluster: Putative uncharacterized protein; n=1; ... 113 7e-24
UniRef50_A5D1V8 Cluster: Uncharacterized conserved protein; n=4;... 113 7e-24
UniRef50_Q2RZP0 Cluster: Uncharacterized protein family UPF0027;... 106 8e-22
UniRef50_Q9V168 Cluster: UPF0027 protein PYRAB05600 [Contains: P... 103 6e-21
UniRef50_Q58095 Cluster: UPF0027 protein MJ0682 [Contains: Mja h... 96 8e-19
UniRef50_Q8TUS2 Cluster: UPF0027 protein MK1682 [Contains: Mka h... 84 4e-15
UniRef50_A4XIW5 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_Q72DS6 Cluster: Putative uncharacterized protein; n=2; ... 55 3e-06
UniRef50_Q4TC88 Cluster: Chromosome undetermined SCAF7042, whole... 54 6e-06
UniRef50_P46850 Cluster: Protein rtcB; n=73; cellular organisms|... 54 6e-06
UniRef50_Q3J9M5 Cluster: Putative uncharacterized protein; n=5; ... 52 1e-05
UniRef50_Q09CZ4 Cluster: RtcB protein; n=2; Cystobacterineae|Rep... 52 2e-05
UniRef50_Q8I5J3 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_A5K021 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_Q7URB3 Cluster: Putative uncharacterized protein; n=2; ... 49 1e-04
UniRef50_Q9KBY5 Cluster: BH1789 protein; n=5; Bacteria|Rep: BH17... 49 2e-04
UniRef50_Q7NY50 Cluster: Putative uncharacterized protein; n=5; ... 48 3e-04
UniRef50_A1ZPN4 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB p... 48 3e-04
UniRef50_UPI00006A2AF4 Cluster: UPI00006A2AF4 related cluster; n... 46 9e-04
UniRef50_Q08WH4 Cluster: RtcB protein; n=3; Bacteria|Rep: RtcB p... 45 0.002
UniRef50_Q08W43 Cluster: Rtcb protein; n=9; Bacteria|Rep: Rtcb p... 45 0.002
UniRef50_Q8YRC2 Cluster: All3526 protein; n=6; cellular organism... 45 0.003
UniRef50_A1K1J2 Cluster: RtcB protein; n=7; Bacteria|Rep: RtcB p... 45 0.003
UniRef50_Q1FKT8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A7BNF2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.008
UniRef50_A6PNP2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.008
UniRef50_Q185T6 Cluster: Putative uncharacterized protein; n=3; ... 42 0.014
UniRef50_Q0UMZ4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_Q389M0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.033
UniRef50_Q1K006 Cluster: Putative uncharacterized protein; n=1; ... 40 0.059
UniRef50_A6FXH5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.059
UniRef50_Q8RJY8 Cluster: ORF8, ORF7, ORF6, ORF5, ORF4, ORF3, ORF... 40 0.077
UniRef50_Q8A7R9 Cluster: Protein rtcB; n=7; cellular organisms|R... 40 0.10
UniRef50_A6DJD1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.10
UniRef50_Q73PJ5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.14
UniRef50_A6ELD5 Cluster: Protein rtcB; n=4; Bacteroidetes|Rep: P... 38 0.24
UniRef50_A3RTM5 Cluster: RtcB protein; n=37; Proteobacteria|Rep:... 38 0.24
UniRef50_Q30KY5 Cluster: Gp160; n=4; root|Rep: Gp160 - Listeria ... 38 0.24
UniRef50_A3IXW8 Cluster: Putative uncharacterized protein; n=3; ... 38 0.31
UniRef50_Q7QTD7 Cluster: GLP_9_6218_4470; n=1; Giardia lamblia A... 38 0.31
UniRef50_Q9RX85 Cluster: RtcB protein; n=1; Deinococcus radiodur... 38 0.41
UniRef50_Q8NLE1 Cluster: Uncharacterized ACR; n=7; Actinomycetal... 38 0.41
UniRef50_A0YUJ4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.41
UniRef50_A4X6J3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.55
UniRef50_Q21NY4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A5EB30 Cluster: Putative uncharacterized protein; n=2; ... 36 1.3
UniRef50_Q4KAP7 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB p... 36 1.7
UniRef50_A6EDZ6 Cluster: Protein rtcB; n=1; Pedobacter sp. BAL39... 36 1.7
UniRef50_A0W7X6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q2KCK7 Cluster: Ribose ABC transporter, ATP-binding pro... 35 2.9
UniRef50_Q0LEE1 Cluster: Putative uncharacterized protein; n=3; ... 35 2.9
UniRef50_A1FGD7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A2F2D4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q8A557 Cluster: Putative uncharacterized protein; n=2; ... 34 5.1
UniRef50_UPI0000ECA2BE Cluster: UPI0000ECA2BE related cluster; n... 33 6.7
UniRef50_Q10ZZ1 Cluster: Cupin 4; n=1; Trichodesmium erythraeum ... 33 6.7
UniRef50_A6CAJ4 Cluster: RtcB protein; n=3; Bacteria|Rep: RtcB p... 33 6.7
UniRef50_A6REF4 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 6.7
UniRef50_Q8EXC7 Cluster: Glutamate synthase; n=8; Bacteria|Rep: ... 33 8.9
UniRef50_A5EM80 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9
UniRef50_A3ZWV5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
>UniRef50_Q9Y3I0 Cluster: UPF0027 protein C22orf28; n=54;
Eukaryota|Rep: UPF0027 protein C22orf28 - Homo sapiens
(Human)
Length = 505
Score = 392 bits (964), Expect = e-108
Identities = 177/215 (82%), Positives = 193/215 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLRE 693
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLEEALEMG+DWSLRE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLRE 182
Query: 694 GYVWAEDKEHCEEYGRMLNADPSKVSLXAKKRGLP 798
GY WAEDKEHCEEYGRML ADP+KVS AKKRGLP
Sbjct: 183 GYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLP 217
>UniRef50_UPI0000499389 Cluster: conserved hypothetical protein;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 189 bits (460), Expect = 9e-47
Identities = 90/194 (46%), Positives = 124/194 (63%)
Frame = +1
Query: 211 IKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIANVAALPGIVGR 390
IKKGF MN + + N L L+ E+ +S + V+Q AN A LPG+VG
Sbjct: 60 IKKGFVEGMNGDAKIFCNDDLLNLLTFEMIK----DISNNYPSCVRQTANAATLPGVVG- 114
Query: 391 SVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIKE 570
S+ +PD HSGYGF+IG + A +DDP++++ PGGVGFDINCGVRL+RTNL +D+ K
Sbjct: 115 SLAMPDAHSGYGFSIGGVVAMRLDDPEAVICPGGVGFDINCGVRLIRTNLQREDIEQHKA 174
Query: 571 QLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKEHCEEYGRMLN 750
+LA LF IP GVG++ I + D + ++ G+++ + GY W ED HCEE+G++ N
Sbjct: 175 RLADELFKQIPSGVGTQAQIAFSPEDFDSIMKEGLEFLVENGYAWEEDLNHCEEHGKIAN 234
Query: 751 ADPSKVSLXAKKRG 792
ADPS VS AK RG
Sbjct: 235 ADPSLVSNSAKSRG 248
>UniRef50_A2FSC4 Cluster: Putative uncharacterized protein; n=7;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 518
Score = 186 bits (454), Expect = 5e-46
Identities = 95/206 (46%), Positives = 128/206 (62%), Gaps = 2/206 (0%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
+++I + I GF PNM V G FY + K +EL N G LP + QI+
Sbjct: 32 IKEIKPCVYEIPIGFVPNMKVPGYFYSTPEMAKYAFDELENWMSNRNQG--LPSILQISF 89
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 540
VA LPGI S G+PD+HSGYGF+IG +AAFD DP +++SPGGVG+DINCGVRL+ TNL
Sbjct: 90 VATLPGITKGSFGMPDMHSGYGFSIGGVAAFDTTDPDALISPGGVGYDINCGVRLMTTNL 149
Query: 541 HEKDVLPIKEQLAQSLFDHIPVGVGSK--GIIPMNARDLEEALEMGMDWSLREGYVWAED 714
++V P+K++L + L+ +IPVGVG K GI P R L + + G W+L G+ ED
Sbjct: 150 TWEEVEPVKKELVEKLYKYIPVGVGGKLDGICP--CRHLRDVMLKGAGWALENGFAVQED 207
Query: 715 KEHCEEYGRMLNADPSKVSLXAKKRG 792
++CEE G + ADPS +S RG
Sbjct: 208 IDNCEENGCLKGADPSLISDRTIARG 233
>UniRef50_Q6LXF9 Cluster: UPF0027 protein MMP1392; n=9; cellular
organisms|Rep: UPF0027 protein MMP1392 - Methanococcus
maripaludis
Length = 480
Score = 170 bits (413), Expect = 4e-41
Identities = 79/151 (52%), Positives = 106/151 (70%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
+QIANVA LPGI S+ +PD H GYGF IG +AAFD + ++SPGGVGFDINCGVRL
Sbjct: 45 EQIANVACLPGIQKYSLAMPDCHYGYGFCIGGVAAFD--EVTGVISPGGVGFDINCGVRL 102
Query: 526 LRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVW 705
++TNL + DV P ++L +F ++P G+GSKG I + +++ LE G+ W++ E Y W
Sbjct: 103 VKTNLTKNDVTPKLKELLSEIFKNVPSGLGSKGKIRITKDEIDSVLEEGVSWAVEEEYGW 162
Query: 706 AEDKEHCEEYGRMLNADPSKVSLXAKKRGLP 798
D +H EE+G+M ADP+ VS AKKRGLP
Sbjct: 163 ERDIKHIEEHGKMKEADPTLVSDNAKKRGLP 193
>UniRef50_Q8ZY09 Cluster: UPF0027 protein PAE0998; n=26; cellular
organisms|Rep: UPF0027 protein PAE0998 - Pyrobaculum
aerophilum
Length = 484
Score = 167 bits (406), Expect = 3e-40
Identities = 87/204 (42%), Positives = 121/204 (59%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
+ KIN Y W I G +P V Y +S L + M ++ ++Q N
Sbjct: 6 INKINDYVWEIPPGVKPCQKVPVRIYADSVLLEKMKSDMT--------------LEQGIN 51
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 540
V LPGI S+ LPD H GYGF IG +AA D ++ ++SPGG+G+DINCGVR+LRTNL
Sbjct: 52 VGCLPGIYRWSIVLPDAHQGYGFPIGGVAAIDAEE--GVISPGGIGYDINCGVRVLRTNL 109
Query: 541 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 720
E+DV P ++L ++F +P GVG G + ++ + E L G++W++++GY WAED E
Sbjct: 110 TEEDVRPKLKELVDTIFRLVPPGVGGTGHLRLSPSEFERVLAEGVEWAVQKGYGWAEDME 169
Query: 721 HCEEYGRMLNADPSKVSLXAKKRG 792
+ EE G ADPSKVS AK RG
Sbjct: 170 YIEERGSWKLADPSKVSEKAKARG 193
>UniRef50_Q5XQ66 Cluster: Putative uncharacterized protein; n=5;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos26D8
Length = 506
Score = 158 bits (384), Expect = 1e-37
Identities = 72/152 (47%), Positives = 102/152 (67%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q NVA+LPGI S+ +PD H GYGF IG +AA D ++ ++SPGGVG+DINCGVR
Sbjct: 49 LQQTINVASLPGIEKYSMVMPDGHQGYGFPIGGVAATDFEE--GVISPGGVGYDINCGVR 106
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 702
L+RTNL EKDV P + +LF+++P G+G G + ++ L+E L+ G +W + GY
Sbjct: 107 LIRTNLMEKDVRPYLPDILDTLFEYVPAGLGLSGKVRLSYSQLDEVLKGGTEWCIENGYG 166
Query: 703 WAEDKEHCEEYGRMLNADPSKVSLXAKKRGLP 798
W ED E EE G++ A+P K+ +KKRG P
Sbjct: 167 WEEDIERTEEGGKLKAANPEKIDEKSKKRGAP 198
>UniRef50_Q5ZTG1 Cluster: Replication factor C subunit; n=17;
Bacteria|Rep: Replication factor C subunit - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 477
Score = 149 bits (362), Expect = 6e-35
Identities = 87/207 (42%), Positives = 123/207 (59%)
Frame = +1
Query: 169 ELKYLEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVK 348
+L L+KIN + W+I + M V GV + + E+L+L+ M + +
Sbjct: 3 DLSLLKKINDFEWQIPQ--HGKMLVPGVIFAS---EQLILD---------MD---MKVYE 45
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 528
Q++NVA LPGIV + +PD H GYGF IG +AAFD DD ++S GGVGFDI+CGVRLL
Sbjct: 46 QLSNVATLPGIVSAAYAMPDAHWGYGFPIGGVAAFDPDDG-GVISAGGVGFDISCGVRLL 104
Query: 529 RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWA 708
T L ++ +K LA +LF HIP GVGS+G I + + L++ + G W++++GY A
Sbjct: 105 STGLKRDELESVKVSLADALFTHIPAGVGSRGGIHLTIKQLDDMMRGGAQWAVKQGYGEA 164
Query: 709 EDKEHCEEYGRMLNADPSKVSLXAKKR 789
D E E+ G + A P VS AKKR
Sbjct: 165 ADLERIEDRGCVEGAIPDFVSEQAKKR 191
>UniRef50_Q8SWJ2 Cluster: Putative uncharacterized protein
ECU01_1120; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU01_1120 - Encephalitozoon
cuniculi
Length = 477
Score = 148 bits (359), Expect = 1e-34
Identities = 79/196 (40%), Positives = 114/196 (58%)
Frame = +1
Query: 208 RIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIANVAALPGIVG 387
++ F +M YV+ L K ++ EL +G L + QI++V +LPG++G
Sbjct: 12 KVSPSFNKSMRTSATIYVDEELRKPLMSELE-------AGKGLSSIGQISDVCSLPGLIG 64
Query: 388 RSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIK 567
+GLPD+H+GYGF IG++AAFD+++P+S+VSPGGVG+DINCGVR LRTNL
Sbjct: 65 DVIGLPDIHTGYGFPIGSVAAFDINNPESVVSPGGVGYDINCGVRALRTNLDIGGFRGKA 124
Query: 568 EQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKEHCEEYGRML 747
+ LA LF+ IP G+GS + L LE G+ + L+ + ED E+CE G M
Sbjct: 125 DALADELFNIIPTGMGSDRRSRIGLDVLNSVLEQGLGYLLKSKEISDEDVEYCESNGCMA 184
Query: 748 NADPSKVSLXAKKRGL 795
D V +K +GL
Sbjct: 185 -GDSRFVGQKSKGKGL 199
>UniRef50_A1I791 Cluster: RtcB protein; n=6; cellular organisms|Rep:
RtcB protein - Candidatus Desulfococcus oleovorans Hxd3
Length = 477
Score = 148 bits (358), Expect = 2e-34
Identities = 83/204 (40%), Positives = 117/204 (57%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
L +I+ Y W I + M V G+ Y ++ + + +E CR Q+AN
Sbjct: 3 LRQIDDYRWEIPQ--TGAMRVPGIIYADAAMMAALQKE--EACR------------QVAN 46
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 540
VA LPGIV S+ +PD+H GYGF IG +AAFDMD+ ++SPGGVG+DINCGVRL T L
Sbjct: 47 VATLPGIVKASLAMPDIHWGYGFPIGGVAAFDMDE--GVISPGGVGYDINCGVRLAVTKL 104
Query: 541 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 720
+V P LA +L+ +P GVGS G I + + ++A+ G W+++ G A+D +
Sbjct: 105 FADEVGPRIADLADALYAGVPCGVGSTGGIRLTVAEEKKAISQGASWAVKRGLGDADDID 164
Query: 721 HCEEYGRMLNADPSKVSLXAKKRG 792
E+ G M ADP VS A +RG
Sbjct: 165 RTEDCGHMAEADPEAVSDNALERG 188
>UniRef50_Q8KET1 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein -
Chlorobium tepidum
Length = 465
Score = 138 bits (333), Expect = 2e-31
Identities = 78/208 (37%), Positives = 115/208 (55%)
Frame = +1
Query: 169 ELKYLEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVK 348
E + +I+ + W I + ++ +M V FY + + + +L + ++
Sbjct: 2 ERSAIRQISGWLWEIPRSYRSDMRVPARFYASEAMLEQILADR--------------SLE 47
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 528
Q+ NVA LPGIVG ++ +PD+H GYGF IG +AAFD D I+SPGG+G+DINCGVRLL
Sbjct: 48 QLVNVATLPGIVGFALAMPDIHEGYGFPIGGVAAFDPD--AGIISPGGIGYDINCGVRLL 105
Query: 529 RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWA 708
T+ + V L + ++ +P GVG I +++ LE+ L G + GY
Sbjct: 106 ATSQPFESVREKIPDLVKEIYRQVPSGVGHGNRITFSSKQLEQILRDGAPRMVAFGYGEP 165
Query: 709 EDKEHCEEYGRMLNADPSKVSLXAKKRG 792
ED H E G + ADPSKVS AK+RG
Sbjct: 166 EDLGHIESGGVIDVADPSKVSQYAKQRG 193
>UniRef50_Q6L1G2 Cluster: RtcB protein; n=3; cellular organisms|Rep:
RtcB protein - Picrophilus torridus
Length = 470
Score = 138 bits (333), Expect = 2e-31
Identities = 67/151 (44%), Positives = 95/151 (62%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q+ NVA+LPGIV + +PD+H GYGF IG +AAFD D+ IVSPGGVG+DINCGV
Sbjct: 40 LRQLMNVASLPGIVKAAYAMPDIHLGYGFPIGGVAAFDYDE--GIVSPGGVGYDINCGVS 97
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 702
L++TN+ D + L +F ++P G+ K +N D+ + L G+ W++ +GY
Sbjct: 98 LIKTNISYNDAKSRIKDLIDEIFKNVPAGIDLKSSFRVNKNDMTDILSDGIKWAVSKGYG 157
Query: 703 WAEDKEHCEEYGRMLNADPSKVSLXAKKRGL 795
D E EE G M N++P KVS A RG+
Sbjct: 158 TERDIESTEENGSM-NSNPDKVSEKAISRGI 187
>UniRef50_Q978S0 Cluster: Putative uncharacterized protein
TVG1391663; n=4; Thermoplasmatales|Rep: Putative
uncharacterized protein TVG1391663 - Thermoplasma
volcanium
Length = 469
Score = 130 bits (315), Expect = 3e-29
Identities = 75/205 (36%), Positives = 112/205 (54%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
+ KI+ Y + I + + +M V G+ Y L K +E+ + Q+ N
Sbjct: 6 IRKIDDYTYEIPR--EGDMIVHGIVYSTDKLFKNTVED--------------GSLNQVVN 49
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 540
VA LPGIV S +PD+H GYGF IG +AAFD D+ I+SPGGVG+DINCGV LLRT +
Sbjct: 50 VAKLPGIVEASYAMPDIHLGYGFPIGGVAAFDYDE--GIISPGGVGYDINCGVALLRTGM 107
Query: 541 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 720
+ + P + + +F +P G+ S+ P+N DL+E L G+ W++ G D
Sbjct: 108 NYAQIKPRIKDITDYIFQEVPSGLTSRKGFPVNQNDLQEILTSGLKWAVSRGLATELDMI 167
Query: 721 HCEEYGRMLNADPSKVSLXAKKRGL 795
+ E+ G + + + VS A +RGL
Sbjct: 168 NTEDNG-SIESHGTHVSKQAMQRGL 191
>UniRef50_A2RQD0 Cluster: RtcB like protein; n=3; root|Rep: RtcB
like protein - Archaeal BJ1 virus
Length = 502
Score = 129 bits (311), Expect = 1e-28
Identities = 74/204 (36%), Positives = 111/204 (54%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
LEK+ + W I + + +MNV + L LEE+ G ++Q+ N
Sbjct: 11 LEKVREHVWEIPR--EGDMNVPARVLASEAL----LEEI----------GEDDSLQQLKN 54
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 540
LPG+ ++ +PD H GYGF +G + A D +SPG VG+DINCGVR+++TNL
Sbjct: 55 ATHLPGMAEPALCMPDGHQGYGFPVGGVGAIDART--GCISPGAVGYDINCGVRMVKTNL 112
Query: 541 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 720
DV + +L +LF+ +P G+G G+I +A +E ALE G++W++ +GY D
Sbjct: 113 SYDDVRGRESELVDALFEAVPSGLGGGGVIDGDADAIEGALERGVEWAVEQGYGIESDLA 172
Query: 721 HCEEYGRMLNADPSKVSLXAKKRG 792
CE+ GR +A P VS A RG
Sbjct: 173 RCEDEGRRPDARPEYVSQKATDRG 196
>UniRef50_P71930 Cluster: UPF0027 protein Rv2631/MT2707; n=19;
cellular organisms|Rep: UPF0027 protein Rv2631/MT2707 -
Mycobacterium tuberculosis
Length = 432
Score = 123 bits (297), Expect = 5e-27
Identities = 70/151 (46%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 528
Q+ NVA LPGIV S +PDVH GYGF IG +AA D+D+ +VSPGGVGFDI+CGVRLL
Sbjct: 2 QVVNVATLPGIVRASYAMPDVHWGYGFPIGGVAATDVDN-DGVVSPGGVGFDISCGVRLL 60
Query: 529 -RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARD-LEEALEMGMDWSLREGYV 702
L +++ P + L IP GVG+ G+ + R+ L+E L G +++ +G+
Sbjct: 61 VGEGLDREELQPRLPAVMDRLDRAIPRGVGTAGVWRLPDRNTLQEVLTGGARFAVEQGHG 120
Query: 703 WAEDKEHCEEYGRMLNADPSKVSLXAKKRGL 795
A D E CE+ G M AD +K+S A +RGL
Sbjct: 121 VALDLERCEDGGVMTGADAAKISDRALQRGL 151
>UniRef50_Q30ZL0 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 478
Score = 119 bits (287), Expect = 8e-26
Identities = 58/149 (38%), Positives = 89/149 (59%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
+ Q+ A+LPG+ G + +PD HSGYGF IG +A F + I+S GGVG+DI CGVR
Sbjct: 47 IHQLTTAASLPGVAGSVICMPDAHSGYGFPIGCVAGF-CAGKEGIISAGGVGYDIGCGVR 105
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 702
L T++ +V + ++A +LF IP G+ + +NA ++++ L G W++R G
Sbjct: 106 TLLTDIPAAEVYARRGEIADALFRAIPAGLKGSSHLSLNAEEIKQILHEGAAWAVRNGMG 165
Query: 703 WAEDKEHCEEYGRMLNADPSKVSLXAKKR 789
ED H EE G + AD ++VS A++R
Sbjct: 166 EKEDLWHTEENGCVAGADAAQVSTEARQR 194
>UniRef50_Q2AIS2 Cluster: Putative uncharacterized protein; n=1;
Halothermothrix orenii H 168|Rep: Putative
uncharacterized protein - Halothermothrix orenii H 168
Length = 436
Score = 113 bits (271), Expect = 7e-24
Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
+KQ+ N A+LPG+VG +GLPD+H GYG IG + + K ++SPG VGFDINCGVR
Sbjct: 22 LKQLFNAASLPGVVG-VIGLPDIHQGYGLPIGGVMCSSLK--KGVISPGAVGFDINCGVR 78
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL-REGY 699
LL L +D++ + + L + IP G+G + + E +E G+ + + R GY
Sbjct: 79 LLVAGLRLEDIIDKLDDIMSGLKNEIPAGLGVNSTLTFTDQQFERVVEEGLPFLITRLGY 138
Query: 700 VWAEDKEHCEEYGRMLNADPSKVSLXAKKRG 792
D CEE G + AD + VS A RG
Sbjct: 139 GQTIDIAACEENGHLKGADLTGVSKKAINRG 169
>UniRef50_A5D1V8 Cluster: Uncharacterized conserved protein; n=4;
Clostridia|Rep: Uncharacterized conserved protein -
Pelotomaculum thermopropionicum SI
Length = 476
Score = 113 bits (271), Expect = 7e-24
Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 2/198 (1%)
Frame = +1
Query: 205 WRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIANVAALPGIV 384
+R+K+ NM V+G YVN L L+ + ++Q+AN A+LPG+V
Sbjct: 14 YRLKRS--GNMRVDGFVYVNEYLLPLVRRD--------------KSLEQLANAASLPGVV 57
Query: 385 GRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDV-LP 561
R G+PD+H G+G IG + A D ++S G VG DINCGVRLL TN+ K++ +P
Sbjct: 58 ERVCGMPDIHEGFGLPIGGVMATAAD---GVISAGAVGMDINCGVRLLATNIMAKELKIP 114
Query: 562 IKEQLAQSLFDHIPVGVGSKG-IIPMNARDLEEALEMGMDWSLREGYVWAEDKEHCEEYG 738
+L + + +++P GVG KG + EE + G ++ GY ED EE G
Sbjct: 115 FLRRLIERIEEYVPTGVGKKGKHKAITGEIFEEVVHTGSRGIVKRGYGRPEDLGRTEEEG 174
Query: 739 RMLNADPSKVSLXAKKRG 792
+ AD VS A KRG
Sbjct: 175 CLSGADLGAVSGEAYKRG 192
>UniRef50_Q2RZP0 Cluster: Uncharacterized protein family UPF0027;
n=1; Salinibacter ruber DSM 13855|Rep: Uncharacterized
protein family UPF0027 - Salinibacter ruber (strain DSM
13855)
Length = 476
Score = 106 bits (254), Expect = 8e-22
Identities = 65/204 (31%), Positives = 100/204 (49%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
L +I+ + W I K FQ M V + L +LE + Q
Sbjct: 6 LTRIDEFTWEIPKSFQDAMRVPVRILASENLIDEILER--------------KAIGQAIR 51
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 540
+ L G+VG V +PDV+SG G +G +A P ++PG +G DIN GVRLL +++
Sbjct: 52 TSMLSGLVGHLVVMPDVYSGQGAPVGIVAVSKW--PVGTIAPGAIGHDINAGVRLLGSDI 109
Query: 541 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 720
++ + LA +L +HIP G ++G I +N +++ + G W+LR+ +D
Sbjct: 110 KTEEAEGNFDALADALKNHIPSGTDAEGSISLNKSEVDHVAQSGAQWALRKDMAQQDDLV 169
Query: 721 HCEEYGRMLNADPSKVSLXAKKRG 792
EE GR+ ADP KVS A+ G
Sbjct: 170 RAEEGGRLNEADPKKVSEAARSIG 193
>UniRef50_Q9V168 Cluster: UPF0027 protein PYRAB05600 [Contains: Pab
hyp2 intein (EC 3.1.-.-)]; n=8; Archaea|Rep: UPF0027
protein PYRAB05600 [Contains: Pab hyp2 intein (EC
3.1.-.-)] - Pyrococcus abyssi
Length = 916
Score = 103 bits (247), Expect = 6e-21
Identities = 49/97 (50%), Positives = 64/97 (65%)
Frame = +1
Query: 508 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 687
NCGVRL+RTNL EKDV P +QL +LF ++P GVGS+G + ++ +++ L G W++
Sbjct: 533 NCGVRLIRTNLTEKDVRPRIKQLVDTLFKNVPSGVGSQGRVRLHWTQIDDVLVDGAKWAV 592
Query: 688 REGYVWAEDKEHCEEYGRMLNADPSKVSLXAKKRGLP 798
GY W ED E EE GRM ADP VS AK+RG P
Sbjct: 593 DNGYGWEEDLERLEEGGRMEGADPDAVSQRAKQRGAP 629
Score = 76.6 bits (180), Expect = 7e-13
Identities = 45/111 (40%), Positives = 65/111 (58%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
L++I+ W I K F M V G Y + L LE++++ ++Q AN
Sbjct: 5 LKRIDKIRWEIPK-FDKRMRVPGRVYADDVL----LEKMKSDRT----------LEQAAN 49
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
VA LPGI S+ +PD H GYGF IG +AAFD+++ ++SPGG+G+DINC
Sbjct: 50 VAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFDVNE--GVISPGGIGYDINC 98
>UniRef50_Q58095 Cluster: UPF0027 protein MJ0682 [Contains: Mja hyp2
intein (EC 3.1.-.-)]; n=5; Archaea|Rep: UPF0027 protein
MJ0682 [Contains: Mja hyp2 intein (EC 3.1.-.-)] -
Methanococcus jannaschii
Length = 968
Score = 96.3 bits (229), Expect = 8e-19
Identities = 44/95 (46%), Positives = 68/95 (71%)
Frame = +1
Query: 508 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 687
NCGVRL+RTNL +++V ++L ++LF ++P G+GSKGI+ + +++ LE G+ W++
Sbjct: 585 NCGVRLIRTNLTKEEVQSKIKELIKTLFKNVPSGLGSKGILKFSKSVMDDVLEEGVRWAV 644
Query: 688 REGYVWAEDKEHCEEYGRMLNADPSKVSLXAKKRG 792
+EGY W ED E EE+G + +AD S VS AK+RG
Sbjct: 645 KEGYGWKEDLEFIEEHGCLKDADASYVSDKAKERG 679
Score = 89.8 bits (213), Expect = 7e-17
Identities = 49/111 (44%), Positives = 70/111 (63%)
Frame = +1
Query: 181 LEKINSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIAN 360
L++++ W + K ++ M V G Y+N +++L+EL P + ++QIAN
Sbjct: 5 LKRVSDVVWELPKDYKDCMRVPGRIYLN----EILLDELE----PEV-------LEQIAN 49
Query: 361 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
VA LPGI S+ +PDVH GYGFAIG +AAFD + ++SPGGVGFDINC
Sbjct: 50 VACLPGIYKYSIAMPDVHYGYGFAIGGVAAFDQRE--GVISPGGVGFDINC 98
>UniRef50_Q8TUS2 Cluster: UPF0027 protein MK1682 [Contains: Mka hyp2
intein (EC 3.1.-.-)]; n=3; cellular organisms|Rep:
UPF0027 protein MK1682 [Contains: Mka hyp2 intein (EC
3.1.-.-)] - Methanopyrus kandleri
Length = 988
Score = 84.2 bits (199), Expect = 4e-15
Identities = 48/107 (44%), Positives = 62/107 (57%)
Frame = +1
Query: 193 NSYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIANVAAL 372
N+ W + + ++ M V G Y EKL+ GM G Q+ANVA L
Sbjct: 12 NNVVWELPEDYKGCMKVPGRIYAT---EKLI---------DGMEKGVFD---QVANVACL 56
Query: 373 PGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
PGI G S+ LPD H GYGF IG +AAFD+++ +VSPGGVG+DINC
Sbjct: 57 PGIYGYSIALPDAHYGYGFPIGGVAAFDVEE--GVVSPGGVGYDINC 101
Score = 69.3 bits (162), Expect = 1e-10
Identities = 29/83 (34%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSK-GIIPMNARDLEEALEMGMDWS 684
NCGVR+++T+L E DV P +L +++F ++P G+GS+ + ++ ++L + + G +W+
Sbjct: 582 NCGVRVMKTDLTEDDVRPKLRELLETIFRNVPAGLGSRHRRVRLSTQELRQVMLYGAEWA 641
Query: 685 LREGYVWAEDKEHCEEYGRMLNA 753
+ EG+ + ED +H E G M +A
Sbjct: 642 VEEGFGFDEDLDHIESRGNMTHA 664
>UniRef50_A4XIW5 Cluster: Putative uncharacterized protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Putative uncharacterized protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 451
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q N + +P + PD H G G +IG + +DM K+ +SP VG DI CG+R
Sbjct: 31 LQQAKNASQIPNVEFLGY-TPDAHIGKGTSIGTIIVWDMS--KAWISPTIVGVDIGCGMR 87
Query: 523 LLRTNLHEKDV-LPIKEQLAQSLFDHIPVGVGSK 621
L+ T + D+ + +++ + D IP GVG K
Sbjct: 88 LILTKSYADDIDKNLLKKMMSEIEDLIPTGVGKK 121
>UniRef50_Q72DS6 Cluster: Putative uncharacterized protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: Putative
uncharacterized protein - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 423
Score = 54.8 bits (126), Expect = 3e-06
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
+QI NV +L +V ++ +PDVH+GY IG +A +SPG VG+DI CG+
Sbjct: 78 EQIENVLSLDCLVRLAI-MPDVHAGYDLCIGGVALL-----AGTISPGFVGYDIGCGMCH 131
Query: 526 LRTNLHEKDVLP---IKEQLAQSLFDHIPVGVGSKG 624
+ T ++LP +++L + IPVG +G
Sbjct: 132 VNTGRTVDELLPDALSRQRLFDRILHDIPVGTDMRG 167
>UniRef50_Q4TC88 Cluster: Chromosome undetermined SCAF7042, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF7042, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 531
Score = 53.6 bits (123), Expect = 6e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 154 RQYNEELKYLEKINSYCWRIKKGFQPNMNVEG 249
R YN+EL++L+KI S CWRIKKGF PNM G
Sbjct: 3 RSYNDELQFLDKIGSNCWRIKKGFVPNMQASG 34
>UniRef50_P46850 Cluster: Protein rtcB; n=73; cellular
organisms|Rep: Protein rtcB - Escherichia coli (strain
K12)
Length = 408
Score = 53.6 bits (123), Expect = 6e-06
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
+Q+ N A +P I +PDVH G G IG++ K + P VG DI CG+
Sbjct: 28 QQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIP-----TKGAIIPAAVGVDIGCGMNA 82
Query: 526 LRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEE-ALEMGMDWS-LREGY 699
LRT L +D+ +L Q++ +P G + G + E + + W+ L GY
Sbjct: 83 LRTALTAEDLPENLAELRQAIETAVPHG-RTTGRCKRDKGAWENPPVNVDAKWAELEAGY 141
Query: 700 VWAEDKEHCEEYGRMLNADPSK 765
W K Y R LN + K
Sbjct: 142 QWLTQK-----YPRFLNTNNYK 158
>UniRef50_Q3J9M5 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 396
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/89 (35%), Positives = 44/89 (49%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q N+A LP +PD H GYG IG + A K + P VG DI CG+
Sbjct: 36 LEQARNLANLPFAFKHIAIMPDTHQGYGMPIGAILA-----TKGAIIPNAVGVDIGCGMC 90
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVG 609
LRTNL + +KE + + +PVG
Sbjct: 91 SLRTNLEHIETPKLKE-IMGIIRKTVPVG 118
>UniRef50_Q09CZ4 Cluster: RtcB protein; n=2; Cystobacterineae|Rep:
RtcB protein - Stigmatella aurantiaca DW4/3-1
Length = 450
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 528
Q+ N A+ PG+ +V PD H GYG IG + D I+ P G+DI CG+ L
Sbjct: 53 QVVNAASFPGVTRVAV-TPDCHVGYGVPIGTVVETD-----GILLPTAAGYDIGCGMVQL 106
Query: 529 RTNLHEKDVL--PIKEQLAQSLFDHIPVGVGS 618
+T L +DV + + + I VGVG+
Sbjct: 107 KTTLTAEDVADKQKRRRWIDEVTHRIAVGVGA 138
>UniRef50_Q8I5J3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 569
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 528
QI N+A L I G LPDVH G G IG++ K + P GVG DI CGV +
Sbjct: 109 QIQNLARLDIIKGHITILPDVHLGKGIIIGSVFL-----TKDFIIPNGVGVDIGCGVLCI 163
Query: 529 R-TNLHEKDVLPIKEQLAQSLFDHI 600
+ NL +KD + E++ ++++ I
Sbjct: 164 KINNLKKKD---LNEKIINNIYNKI 185
>UniRef50_A5K021 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 470
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/86 (37%), Positives = 45/86 (52%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
+KQI N+A L I G LPDVH G G IG++ K + P GVG DI CGV
Sbjct: 66 LKQIKNLAMLDIIKGHVTILPDVHLGKGIIIGSVFL-----TKDFIIPNGVGVDIGCGVL 120
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHI 600
++ N +K L +E + +++ I
Sbjct: 121 CVKINKLKKKNL--REHIINNIYKKI 144
>UniRef50_Q7URB3 Cluster: Putative uncharacterized protein; n=2;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 528
Score = 49.2 bits (112), Expect = 1e-04
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
+Q N PG V + V PD H GYG +G + M P + V PG VG DI C + L
Sbjct: 75 QQAINSRLAPG-VSQVVLNPDAHVGYGAPVGCV----MVSP-THVYPGPVGVDIKCSMSL 128
Query: 526 LRTNLHEKDVL--PIKEQLAQSLFDHIPVGVG 615
L+T+L E ++ ++ ++ Q++ +P G G
Sbjct: 129 LQTDLPESEITDWKMRRRVIQAIAKRVPTGAG 160
>UniRef50_Q9KBY5 Cluster: BH1789 protein; n=5; Bacteria|Rep: BH1789
protein - Bacillus halodurans
Length = 407
Score = 48.8 bits (111), Expect = 2e-04
Identities = 34/111 (30%), Positives = 57/111 (51%)
Frame = +1
Query: 355 ANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRT 534
A A G V + + + D H GY +G + + ++ +SP GVG+DI CG + ++T
Sbjct: 22 AVTCAQHGDVEQVLLMADHHKGYSQPVGGVVVY-----RNQISPSGVGYDIACGNKAVKT 76
Query: 535 NLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 687
N+ D IK+QL++ + D + + S G+ N +E L DWS+
Sbjct: 77 NVKYVD---IKDQLSK-IMDELAQSI-SFGVGRSNREKVEHDLFDDSDWSV 122
>UniRef50_Q7NY50 Cluster: Putative uncharacterized protein; n=5;
Proteobacteria|Rep: Putative uncharacterized protein -
Chromobacterium violaceum
Length = 477
Score = 48.0 bits (109), Expect = 3e-04
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Frame = +1
Query: 343 VKQIANVAALPGIVG-----RSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDI 507
VKQ+ AA G ++ PD H G +G + A DP+ ++ P +G DI
Sbjct: 63 VKQLLGFAATRSADGHHGVCKACATPDFHPGGIAPVGAVVA---TDPEFVI-PAAIGTDI 118
Query: 508 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 687
NCG+RL+ T L + + P K+ L +S H+ + G +P+ +R + G D +
Sbjct: 119 NCGLRLVSTGLQYETIAPHKDAL-ESRLTHVLLDNGRN--LPVFSRGFAALFDAGPDAFI 175
Query: 688 ----REGYVWA 708
REG +WA
Sbjct: 176 DLLPREG-LWA 185
>UniRef50_A1ZPN4 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB
protein - Microscilla marina ATCC 23134
Length = 403
Score = 48.0 bits (109), Expect = 3e-04
Identities = 34/91 (37%), Positives = 43/91 (47%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
+KQI N G V D H GYG IG A+ K +S GVGFDI CG +
Sbjct: 17 IKQIKNCL---GEEDLGVLTADAHYGYGHPIGGAVAY-----KDKISLSGVGFDIACGNK 68
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVG 615
+RTN+ D+ K + +F I GVG
Sbjct: 69 AVRTNVKAADMDTAK--VMDEIFKQISFGVG 97
>UniRef50_UPI00006A2AF4 Cluster: UPI00006A2AF4 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A2AF4 UniRef100 entry -
Xenopus tropicalis
Length = 312
Score = 46.4 bits (105), Expect = 9e-04
Identities = 28/91 (30%), Positives = 46/91 (50%)
Frame = +1
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 528
Q+ N+A LP + +PDVH G G IG++ + K+I+ P VG D+ CG+
Sbjct: 32 QLRNIARLPIVFKHVAVMPDVHLGIGATIGSV----VPTLKAII-PAAVGVDLGCGMMAC 86
Query: 529 RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSK 621
+T L D+ + ++ +PVG+ K
Sbjct: 87 KTTLTASDLPDNLAGVRTAIERAVPVGMTPK 117
>UniRef50_Q08WH4 Cluster: RtcB protein; n=3; Bacteria|Rep: RtcB
protein - Stigmatella aurantiaca DW4/3-1
Length = 474
Score = 45.2 bits (102), Expect = 0.002
Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Frame = +1
Query: 346 KQIANVAALP----GIVGRSVGLPDVHSG-YGFAIGNMAAFDMDDPKSIVSPGGVGFDIN 510
+Q+A +AAL G V R PD H G G AIG++ + +V PG VG DIN
Sbjct: 55 RQLAQLAALKHPGGGAVLRVRATPDFHPGDSGVAIGSVL-----HTQGMVVPGAVGTDIN 109
Query: 511 CGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLR 690
CG+RL +L L + + + H G + M++R E L G+ L
Sbjct: 110 CGMRLHVADLSVDTFLSRRGDFVERMKGHYFFGTRD---VAMSSRAAEALLRDGIPGWLL 166
Query: 691 EGYVWAEDKEHCEEYGRM--LNADPSKVSLXAKKRGLPHWA 807
E E C + L+ + +++ L G P WA
Sbjct: 167 E---TMEHPLGCAARADLSQLDRESTRIHLGGALEGTPAWA 204
>UniRef50_Q08W43 Cluster: Rtcb protein; n=9; Bacteria|Rep: Rtcb
protein - Stigmatella aurantiaca DW4/3-1
Length = 408
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
+Q+ N+A LP I +PDVH G+G +G++ V P VG DI CG+
Sbjct: 31 QQLKNLAGLPFIHKWVAAMPDVHRGFGATVGSVV-----PTVGAVIPAAVGVDIGCGMIA 85
Query: 526 LRTNLHEKDV 555
+RT L + +
Sbjct: 86 VRTTLRAEQL 95
>UniRef50_Q8YRC2 Cluster: All3526 protein; n=6; cellular
organisms|Rep: All3526 protein - Anabaena sp. (strain
PCC 7120)
Length = 393
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/88 (29%), Positives = 42/88 (47%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
K NVA+LP + +PDVH G G +G++ A K + P VG DI CG+
Sbjct: 28 KMAKNVASLPFVFKHVALMPDVHLGKGALVGSVIA-----TKEAIIPAAVGVDIGCGMSA 82
Query: 526 LRTNLHEKDVLPIKEQLAQSLFDHIPVG 609
++T + + +++ + IP G
Sbjct: 83 IKTPFTSEQLEGKLKKIRLDIEAAIPTG 110
>UniRef50_A1K1J2 Cluster: RtcB protein; n=7; Bacteria|Rep: RtcB
protein - Azoarcus sp. (strain BH72)
Length = 402
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/89 (30%), Positives = 47/89 (52%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q+ N++ LP + +PDVH+G G IG++ + +I+ P VG DI CG+
Sbjct: 26 LQQLVNLSQLPIVDHPIAAMPDVHAGIGATIGSV----IPTAHAII-PAAVGVDIGCGMN 80
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVG 609
LR +L + +L ++ +PVG
Sbjct: 81 ALRLSLDAGRLPDNLGRLRSAIEAAVPVG 109
>UniRef50_Q1FKT8 Cluster: Putative uncharacterized protein; n=1;
Clostridium phytofermentans ISDg|Rep: Putative
uncharacterized protein - Clostridium phytofermentans
ISDg
Length = 196
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
+Q N+A LP I +PD H+G G IG + A + +V P VG DI CG+
Sbjct: 30 EQAMNLARLPFIHKWVCLMPDTHTGKGMPIGGVIATE-----GVVIPNAVGVDIGCGMGF 84
Query: 526 LRTNL 540
++TN+
Sbjct: 85 IQTNI 89
>UniRef50_A7BNF2 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 164
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
+Q+ ++ LP I +PDVH G G IG++ K + P VG D+ CG+
Sbjct: 27 QQLHELSTLPFIHKHVAAMPDVHVGIGATIGSVIP-----TKGAIIPAAVGVDLGCGMSA 81
Query: 526 LRTNLHEKDVLPIKEQLAQSLFDHIPVG 609
++ +L D+ + + + +PVG
Sbjct: 82 VQLSLMASDLPDNLYGIRSKIEEAVPVG 109
>UniRef50_A6PNP2 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 348
Score = 43.2 bits (97), Expect = 0.008
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
V+Q+ A LPG++ + G+PD+H G +G AA + ++ P G D+ CG+
Sbjct: 6 VEQLKRAAELPGMIA-AAGMPDLHPGLSAPVG--AALLSE---GVIYPELAGGDVGCGIA 59
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIP 603
L RT L K L + L H+P
Sbjct: 60 LFRTGLAAGKFKAAK--LERRLLAHLP 84
>UniRef50_Q185T6 Cluster: Putative uncharacterized protein; n=3;
Clostridium|Rep: Putative uncharacterized protein -
Clostridium difficile (strain 630)
Length = 355
Score = 42.3 bits (95), Expect = 0.014
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
KQ+ +++ L GI+ R VGLPD+H+G +G +A + K+I+ P +G DI CG+ L
Sbjct: 20 KQLEDISKLNGIL-RVVGLPDLHAG-KIPVG-LAV----ETKNIIYPHIIGNDIGCGMTL 72
Query: 526 LRTNLHEK 549
+T + +K
Sbjct: 73 FKTGVLKK 80
>UniRef50_Q0UMZ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 532
Score = 42.3 bits (95), Expect = 0.014
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 343 VKQIANVA-ALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 519
V Q++ A LPGIV +VG PD+H G F IG + A K V P +G DI CG+
Sbjct: 122 VTQLSTTAHTLPGIV-HAVGQPDLHPGSKFPIGAVIA-----SKGWVHPPLIGGDIGCGM 175
Query: 520 RLLRTNLHEKDV 555
+T L V
Sbjct: 176 AWFKTTLPRSQV 187
>UniRef50_Q389M0 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 486
Score = 41.1 bits (92), Expect = 0.033
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSV-GLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 519
V+Q+ ++ L I+ V +PDVH+ G +G + + ++I+ P VG DI CG+
Sbjct: 73 VEQLLQLSRLGDIIQHPVVAMPDVHTSNGATVGTV----IPTTRAII-PASVGVDIGCGM 127
Query: 520 RLLRTNLHEKDV 555
+RT+L ++D+
Sbjct: 128 IAVRTSLTQEDL 139
>UniRef50_Q1K006 Cluster: Putative uncharacterized protein; n=1;
Desulfuromonas acetoxidans DSM 684|Rep: Putative
uncharacterized protein - Desulfuromonas acetoxidans DSM
684
Length = 364
Score = 40.3 bits (90), Expect = 0.059
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 388 RSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIK 567
R + D H GY IG + A + ++ P VG+DI CG+ + T ++
Sbjct: 30 RGALMADAHLGYALPIGGVIA-----TQDVIVPAWVGYDIGCGMCAVPTTFDATEIHAHG 84
Query: 568 EQLAQSLFDHIPVG 609
E + +++ +PVG
Sbjct: 85 EAIFNAIYQAVPVG 98
>UniRef50_A6FXH5 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 411
Score = 40.3 bits (90), Expect = 0.059
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
V Q+A VA + V +VG+PD+HSG G IG AF + P VG D CG R
Sbjct: 13 VAQLARVAGMDDCVF-AVGMPDLHSGPGIPIGAALAFG-----RTIHPHLVGSDAGCGAR 66
Query: 523 LL 528
++
Sbjct: 67 VV 68
>UniRef50_Q8RJY8 Cluster: ORF8, ORF7, ORF6, ORF5, ORF4, ORF3, ORF2,
ORF1, stiA; n=2; Cystobacterineae|Rep: ORF8, ORF7, ORF6,
ORF5, ORF4, ORF3, ORF2, ORF1, stiA - Stigmatella
aurantiaca
Length = 385
Score = 39.9 bits (89), Expect = 0.077
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
VKQ+ +A P + +PDVH G A+G + A + + IV PG +G D+ CGV
Sbjct: 27 VKQLQLLARQPYLAEHVAAMPDVHVAEGVAVGTVFATE----RHIV-PGALGGDLGCGVS 81
Query: 523 LLR 531
+R
Sbjct: 82 AVR 84
>UniRef50_Q8A7R9 Cluster: Protein rtcB; n=7; cellular organisms|Rep:
Protein rtcB - Bacteroides thetaiotaomicron
Length = 465
Score = 39.5 bits (88), Expect = 0.10
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 346 KQIANVAA-LPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
KQ N+A LP VG ++ +PD H+GYG IG + A D + V P VG DI C +
Sbjct: 99 KQQMNLAMRLPVTVGGAL-MPDAHAGYGLPIGGVLATD-----NAVIPYAVGVDIGCRMS 152
Query: 523 L 525
L
Sbjct: 153 L 153
>UniRef50_A6DJD1 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 358
Score = 39.5 bits (88), Expect = 0.10
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q+ A+LPG+ +VGLPD+H G G IG A F + I P VG DI CG+
Sbjct: 13 LEQLKQTASLPGMK-LAVGLPDLHPGRGNPIG--ATFYSE---GIFYPYLVGGDIGCGMG 66
Query: 523 LLRTNL 540
L ++ L
Sbjct: 67 LWQSQL 72
>UniRef50_Q73PJ5 Cluster: Putative uncharacterized protein; n=1;
Treponema denticola|Rep: Putative uncharacterized
protein - Treponema denticola
Length = 375
Score = 39.1 bits (87), Expect = 0.14
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = +1
Query: 400 LPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIKEQLA 579
+PD H+G G IG F M+ K I+ P VG DI CG+ R N+ D+ +L
Sbjct: 43 MPDCHAGKGAVIG----FTMNIDKYII-PNIVGVDIGCGILSARLNIKNPDL----AELD 93
Query: 580 QSLFDHIPVGVGSKGIIPMNARDLEEAL 663
+ +IP G I ++ ++ EE +
Sbjct: 94 NFIKKNIPHGKAVHRNIKIDNKEFEEEI 121
>UniRef50_A6ELD5 Cluster: Protein rtcB; n=4; Bacteroidetes|Rep:
Protein rtcB - unidentified eubacterium SCB49
Length = 463
Score = 38.3 bits (85), Expect = 0.24
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +1
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 528
Q+ + LP V ++ +PD HSGYG IG + A ++ V P GVG DI C + L
Sbjct: 100 QLYDALKLPIAVAGAL-MPDAHSGYGLPIGGVLA-----TENAVIPYGVGVDIGCRMCLT 153
Query: 529 RTNLHEKDVLPIKEQLAQSLFDHIPVGV 612
+ + + QL L H G+
Sbjct: 154 IYPMKASYLKGKQHQLENILKHHTKFGM 181
>UniRef50_A3RTM5 Cluster: RtcB protein; n=37; Proteobacteria|Rep:
RtcB protein - Ralstonia solanacearum UW551
Length = 379
Score = 38.3 bits (85), Expect = 0.24
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q+ A LPG+ G+PD+H G G+ +G A F + P +G DI CG+
Sbjct: 27 IQQLQTTATLPGM-RHVAGMPDLHPGRGYPVG--APF---FSVGCLYPALIGNDIGCGMA 80
Query: 523 LLRTNL 540
L T+L
Sbjct: 81 LWATDL 86
>UniRef50_Q30KY5 Cluster: Gp160; n=4; root|Rep: Gp160 - Listeria
phage P100
Length = 427
Score = 38.3 bits (85), Expect = 0.24
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVG-LPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 519
V Q+ + + + G V +PD+H+G G +G + + V P +G DI CG+
Sbjct: 47 VGQVIELLSQEFVKGERVRFMPDIHAGKGCVVGTTMTYT-----NKVVPNLIGVDIGCGI 101
Query: 520 RLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALE 666
R+ +L + E+L + + +P G +G + +N + ++L+
Sbjct: 102 RVTELDLEVNNT--TLEKLDSVIKEFVPSGNSVRG-VALNQEKVSKSLK 147
>UniRef50_A3IXW8 Cluster: Putative uncharacterized protein; n=3;
Chroococcales|Rep: Putative uncharacterized protein -
Cyanothece sp. CCY 0110
Length = 996
Score = 37.9 bits (84), Expect = 0.31
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
+K NVA+LP + +PDVH G G +G++ A + V P VG DI C
Sbjct: 27 MKMAKNVASLPFVYKHVALMPDVHLGKGALVGSVIA-----TEDAVIPAAVGVDIGC 78
>UniRef50_Q7QTD7 Cluster: GLP_9_6218_4470; n=1; Giardia lamblia ATCC
50803|Rep: GLP_9_6218_4470 - Giardia lamblia ATCC 50803
Length = 582
Score = 37.9 bits (84), Expect = 0.31
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVG-LPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 519
+ + +A LP V + + +PD HSG G +G A +D + + P +G DI CG+
Sbjct: 20 IAMLKELAKLPFFVNQPIRVMPDCHSGKGTIVGFSAPYD-----TCIIPSIIGVDIGCGM 74
Query: 520 RLLRTNLHEKDVLPIKEQLAQSLF 591
++R L K + P + +++ F
Sbjct: 75 FVIR--LPNKLLEPYEGKISDQSF 96
>UniRef50_Q9RX85 Cluster: RtcB protein; n=1; Deinococcus
radiodurans|Rep: RtcB protein - Deinococcus radiodurans
Length = 470
Score = 37.5 bits (83), Expect = 0.41
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 337 PGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCG 516
PG + +VA I +PD H GYG IG + A ++ V P GVG DI C
Sbjct: 95 PGAHRQMDVAMQLPISRAGALMPDAHVGYGLPIGGVLA-----TENAVIPYGVGVDIGCS 149
Query: 517 VRL 525
+ L
Sbjct: 150 MML 152
>UniRef50_Q8NLE1 Cluster: Uncharacterized ACR; n=7;
Actinomycetales|Rep: Uncharacterized ACR -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 383
Score = 37.5 bits (83), Expect = 0.41
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
+KQ A +P I +PD H G G ++G + K + P VG DI CG+
Sbjct: 16 LKQAEATATMPFIYPHVALMPDAHFGLGSSVGTVFG-----TKGAIIPAAVGVDIGCGMI 70
Query: 523 LLRTNLHEKDV 555
+ TN D+
Sbjct: 71 GVCTNYTASDL 81
>UniRef50_A0YUJ4 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 624
Score = 37.5 bits (83), Expect = 0.41
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 358 NVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
NVA+LP + +PDVH G G +G++ A K + P VG DI C
Sbjct: 32 NVASLPFVFKHVALMPDVHLGKGALVGSVIA-----TKDAIIPAAVGVDIGC 78
>UniRef50_A4X6J3 Cluster: Putative uncharacterized protein; n=1;
Salinispora tropica CNB-440|Rep: Putative
uncharacterized protein - Salinispora tropica CNB-440
Length = 395
Score = 37.1 bits (82), Expect = 0.55
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
V Q VAAL G+V G+PD+H G G IG AA +++ P VG DI CG+
Sbjct: 34 VDQCRQVAALDGMV-HVAGMPDLHPGKGAPIG--AAM----TSTLLYPHLVGSDIGCGIA 86
Query: 523 LLRTNLHEKDVLPIKEQLA 579
+ L K V+P E+LA
Sbjct: 87 VFPIVL--KRVVP--ERLA 101
>UniRef50_Q21NY4 Cluster: Putative uncharacterized protein; n=1;
Saccharophagus degradans 2-40|Rep: Putative
uncharacterized protein - Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)
Length = 410
Score = 35.9 bits (79), Expect = 1.3
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q+ + L G+ +VG+PD+H G G IG AAF + + P VG DI CG+
Sbjct: 39 LQQLTKTSQLQGM-RFAVGMPDLHPGRGNPIG--AAF---VTQGCIYPHLVGSDIGCGMG 92
Query: 523 LLRTNLHEKDV 555
L + ++ K +
Sbjct: 93 LWQLDVKPKQI 103
>UniRef50_A5EB30 Cluster: Putative uncharacterized protein; n=2;
Bradyrhizobium|Rep: Putative uncharacterized protein -
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 379
Score = 35.9 bits (79), Expect = 1.3
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSV-GLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 519
V+Q+ VA +PG+ R+V GLPD+H G +G D + P VG D CG+
Sbjct: 28 VRQLETVADIPGV--RAVAGLPDLHPGKFGPVGCAILADQ------IHPAFVGSDAGCGM 79
Query: 520 RLLRTNLHEKDV 555
L + +L + +
Sbjct: 80 ALYQLDLASRRI 91
>UniRef50_Q4KAP7 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB
protein - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 477
Score = 35.5 bits (78), Expect = 1.7
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 376 GIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDV 555
G V + PD H+G +G++ D +V P +G DINCG+RL + L+ +
Sbjct: 70 GEVKCACATPDFHTGSPIPVGSVIVTSHD----MVVPQAIGTDINCGMRLHKLGLNYEQF 125
Query: 556 LPIK 567
+ K
Sbjct: 126 MAQK 129
>UniRef50_A6EDZ6 Cluster: Protein rtcB; n=1; Pedobacter sp.
BAL39|Rep: Protein rtcB - Pedobacter sp. BAL39
Length = 466
Score = 35.5 bits (78), Expect = 1.7
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +1
Query: 346 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 525
KQ+ +LP + + +PD H+GYG IG + A + V P VG DI C R+
Sbjct: 101 KQMELAMSLP-VATQGALMPDAHTGYGLPIGAVLA-----TEDAVIPYAVGVDIGC--RM 152
Query: 526 LRTNLHEKD 552
T + E D
Sbjct: 153 AMTIIDETD 161
>UniRef50_A0W7X6 Cluster: Putative uncharacterized protein; n=1;
Geobacter lovleyi SZ|Rep: Putative uncharacterized
protein - Geobacter lovleyi SZ
Length = 387
Score = 35.1 bits (77), Expect = 2.2
Identities = 22/57 (38%), Positives = 25/57 (43%)
Frame = +1
Query: 349 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 519
QI + P GR +PD H+G G IG F V P VG DI CGV
Sbjct: 18 QIRLIQEHPAFEGRVAIMPDAHAGAGCVIGFTGRFGCG-----VIPNIVGVDIGCGV 69
>UniRef50_Q2KCK7 Cluster: Ribose ABC transporter, ATP-binding
protein; n=1; Rhizobium etli CFN 42|Rep: Ribose ABC
transporter, ATP-binding protein - Rhizobium etli
(strain CFN 42 / ATCC 51251)
Length = 477
Score = 34.7 bits (76), Expect = 2.9
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 484 PGGVGFDINCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEAL 663
PG G+R++ LH L + E L LF+H+P G MN+R E
Sbjct: 46 PGSPLEAFQAGIRVIHQELHPLSNLTVAENL---LFEHLPRRYGLVDYRKMNSRAAELLA 102
Query: 664 EMGMD 678
E+G+D
Sbjct: 103 EVGLD 107
>UniRef50_Q0LEE1 Cluster: Putative uncharacterized protein; n=3;
Chloroflexi (class)|Rep: Putative uncharacterized
protein - Herpetosiphon aurantiacus ATCC 23779
Length = 440
Score = 34.7 bits (76), Expect = 2.9
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
++Q+ LP I + +PD H G+ IG + A + VSP VG DI C +
Sbjct: 75 LEQLLLALRLP-IAAQGALMPDAHPGFALPIGGVFA-----AHNAVSPMMVGVDIGCRMH 128
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGS 618
L ++ +EQL + L D G G+
Sbjct: 129 LTIFAEAPMEIQRQREQLFRDLADVTVFGSGA 160
>UniRef50_A1FGD7 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida W619|Rep: Putative uncharacterized
protein - Pseudomonas putida W619
Length = 277
Score = 34.3 bits (75), Expect = 3.8
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 478 VSPGGVGFDINCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEE 657
VS GVG I G+RL+ L VLP KE Q++F+H+ G + ++ E
Sbjct: 77 VSSKGVGHKIAEGLRLVNDRLKYSIVLPDKE---QAIFNHLAESEGDRYLVASLYLCHHE 133
Query: 658 ALEM-GMDWSLREGYVWAEDKEH 723
++ + W LR+ Y D EH
Sbjct: 134 LTDLDALVWRLRQ-YCAVLDVEH 155
>UniRef50_A2F2D4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 3024
Score = 34.3 bits (75), Expect = 3.8
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 22 LXRFFQFSTKFSIAIYLRFSNLSSRFK*H*HTFSIHK*CKIMVVRQYNEELKYLEKINSY 201
+ FFQ S + ++L+S +K + K C + R Y EL++ ++I Y
Sbjct: 1148 IHEFFQIEVLLSQFLNHICNSLTSHYK---PVLYLAKKCVHKIKRLYGPELRFSQQIYEY 1204
Query: 202 CWRIKKGFQP 231
CW +K F P
Sbjct: 1205 CWSPEKIFTP 1214
>UniRef50_Q8A557 Cluster: Putative uncharacterized protein; n=2;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides thetaiotaomicron
Length = 289
Score = 33.9 bits (74), Expect = 5.1
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 502 DINCGVRLLRTNLHEKDVLPIKEQLAQSLFDHI-PVGVGSKGIIPMNARD-LEEALEMGM 675
++ VRL T+ E V+ + L + F HI P + KG + D L EA ++GM
Sbjct: 125 ELQTSVRLYNTDSLE-GVMKLLPSLPKDSFIHIDPYEIDKKGASGLTYLDILIEATQLGM 183
Query: 676 DWSLREGYVWAEDKEHCEEY 735
L G++ DK H Y
Sbjct: 184 KCLLWYGFMTQHDKSHLNSY 203
>UniRef50_UPI0000ECA2BE Cluster: UPI0000ECA2BE related cluster; n=1;
Gallus gallus|Rep: UPI0000ECA2BE UniRef100 entry -
Gallus gallus
Length = 608
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 434 IANPYPE*TSGNPTDRPTIPGKAATLAICFTPGRNPPDIPG 312
+A+P P+ +P D PT G A+L + F P R PP + G
Sbjct: 203 VAHP-PQGLPHSPRDHPTYVGSPASLGVSFHPPRAPPILSG 242
>UniRef50_Q10ZZ1 Cluster: Cupin 4; n=1; Trichodesmium erythraeum
IMS101|Rep: Cupin 4 - Trichodesmium erythraeum (strain
IMS101)
Length = 385
Score = 33.5 bits (73), Expect = 6.7
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 169 ELKYLEKINSYC-WRIKKGFQPNMNVEGVF 255
EL Y ++N+YC W KKGF P+ + VF
Sbjct: 108 ELGYPTQVNAYCSWSSKKGFSPHYDTHDVF 137
>UniRef50_A6CAJ4 Cluster: RtcB protein; n=3; Bacteria|Rep: RtcB
protein - Planctomyces maris DSM 8797
Length = 467
Score = 33.5 bits (73), Expect = 6.7
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +1
Query: 400 LPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIKEQLA 579
+PD H GYG IG + A + V P VG DI C ++L ++ + Q
Sbjct: 113 MPDAHIGYGLPIGGVLALE-----DAVIPYAVGVDIACRMKLSVLDISVSKLNQKHHQFV 167
Query: 580 QSLFDHIPVGVG 615
+L GVG
Sbjct: 168 DALNRGTVFGVG 179
>UniRef50_A6REF4 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 751
Score = 33.5 bits (73), Expect = 6.7
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = -3
Query: 527 NKRTPQF-ISNPTPPGDTIDLGSSISKAAIFPIANPYPE*TSGNPTDRPT--IPGKAATL 357
N P F + PP T + + S + P P NPTDRPT +P +T
Sbjct: 347 NSTIPPFPTATELPPDTTTPIPTDSSSTIVIPTPTTTPSGVFPNPTDRPTGWVPPNNST- 405
Query: 356 AICFTPGRNPPDIP 315
I +P +PP P
Sbjct: 406 -IVPSPTISPPPAP 418
>UniRef50_Q8EXC7 Cluster: Glutamate synthase; n=8; Bacteria|Rep:
Glutamate synthase - Leptospira interrogans
Length = 550
Score = 33.1 bits (72), Expect = 8.9
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 283 MLE-ELRNCCRPGMSGGFLPGVKQIANVAALPGI-VGRSVGLPDVHSGYG 426
M+E +L +PG GG LPG K +A++ G+ +G+ P+ HS +G
Sbjct: 253 MIEIKLSQGAKPG-KGGILPGKKVTKQIASIRGVPIGKDCVSPNAHSEFG 301
>UniRef50_A5EM80 Cluster: Putative uncharacterized protein; n=2;
Bradyrhizobium|Rep: Putative uncharacterized protein -
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 446
Score = 33.1 bits (72), Expect = 8.9
Identities = 25/93 (26%), Positives = 40/93 (43%)
Frame = +1
Query: 343 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 522
+ Q+ N ++ V V D H GY +G + A++ +S GVGFDI CG
Sbjct: 84 IAQMKNCMSVGNAVA-GVICADGHLGYAQPVGGVIAYEKQ-----ISISGVGFDIGCGNM 137
Query: 523 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSK 621
+R + + + + + I GVG K
Sbjct: 138 AVRLDTQFTAIEDKVGTIIKDVSKVISFGVGRK 170
>UniRef50_A3ZWV5 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 973
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 634 MNARDLEEALEMGMDWSLREGYVWAEDKEHCEEYGRMLNADPSKVSLXAKKRGLPHWA 807
MN + L ++ +L + WA C YG + NAD SL A+K P WA
Sbjct: 1 MNPKSLVTIGKLATCAALSTLFCWASSG--CNRYGYVANADAEAQSLVAQKSNNPRWA 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 880,469,205
Number of Sequences: 1657284
Number of extensions: 19417488
Number of successful extensions: 45126
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 43114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45051
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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