Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H01
(766 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 274 1e-72
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 254 2e-66
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 227 2e-58
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 200 3e-50
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 174 2e-42
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 167 3e-40
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 159 7e-38
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 158 1e-37
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 153 3e-36
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 151 1e-35
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 136 7e-31
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 121 2e-26
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 109 7e-23
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 106 7e-22
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 99 6e-20
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 95 2e-18
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 76 8e-13
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 76 1e-12
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 75 3e-12
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 75 3e-12
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 72 2e-11
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 71 3e-11
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 67 4e-10
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 67 5e-10
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 66 7e-10
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 66 1e-09
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 61 3e-08
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 61 3e-08
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 60 4e-08
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 59 1e-07
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 58 2e-07
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 57 6e-07
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 54 5e-06
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 52 1e-05
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 51 3e-05
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 49 1e-04
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 49 1e-04
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 47 4e-04
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 46 0.001
UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;... 36 0.83
UniRef50_Q57U50 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n... 35 2.5
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 4.4
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 5.9
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 7.8
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 274 bits (673), Expect = 1e-72
Identities = 129/172 (75%), Positives = 151/172 (87%)
Frame = +1
Query: 190 TKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 369
TKIAS+GLKGRVFEVSL DLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 370 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 549
MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 550 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
I R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRF 226
Score = 40.7 bits (91), Expect = 0.039
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 86 IVDPFTRKDWYDVKAP 133
+VDPFTRKDWYDVKAP
Sbjct: 21 VVDPFTRKDWYDVKAP 36
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 135 SMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 227
+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 37 NMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 254 bits (621), Expect = 2e-66
Identities = 124/179 (69%), Positives = 146/179 (81%)
Frame = +1
Query: 169 LSTVPRETKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 348
L T + TKIAS+GLKGRVFEVSL DLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 349 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 528
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 529 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+F
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKF 223
Score = 37.9 bits (84), Expect = 0.27
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 86 IVDPFTRKDWYDVKAP 133
+VDPF++KDWYDVKAP
Sbjct: 21 VVDPFSKKDWYDVKAP 36
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 227 bits (556), Expect = 2e-58
Identities = 111/172 (64%), Positives = 136/172 (79%)
Frame = +1
Query: 190 TKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 369
TKIASEGLK RVFE+SL DLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 370 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 549
+V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 550 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKF 618
Score = 34.3 bits (75), Expect = 3.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 92 DPFTRKDWYDVKAP 133
DPF +KDWYD+KAP
Sbjct: 417 DPFAKKDWYDIKAP 430
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 200 bits (488), Expect = 3e-50
Identities = 96/171 (56%), Positives = 129/171 (75%)
Frame = +1
Query: 193 KIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 372
K A++ LKGR+FEVSL DLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 373 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 552
+V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 553 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKF 223
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 174 bits (424), Expect = 2e-42
Identities = 94/185 (50%), Positives = 128/185 (69%), Gaps = 14/185 (7%)
Frame = +1
Query: 190 TKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 369
TK+AS+GLKGRV+EVSL D++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 370 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 549
++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 550 ITRDVTNSELREVVNKLI--------------PDSIAKDIEKACHGIYPLRDVCIRKVKV 687
+T V++++L+ VV+ LI ++A+ I I+P+ +V IRKVKV
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKV 230
Query: 688 LKRPR 702
LK P+
Sbjct: 231 LKTPK 235
Score = 33.1 bits (72), Expect = 7.8
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2
Query: 89 VDPFTRKDWYDVKAP 133
VDPFTRK+WY V+AP
Sbjct: 16 VDPFTRKEWYVVRAP 30
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 167 bits (405), Expect = 3e-40
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Frame = +1
Query: 169 LSTVPRETKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 348
L T +IASE +KGRV E +L DL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 349 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 519
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 520 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
RAIR+K+ IT + + E LI + K IEK I+PL+++ IRKVKVLKRP
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRP 227
Query: 700 R 702
+
Sbjct: 228 K 228
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 159 bits (386), Expect = 7e-38
Identities = 74/171 (43%), Positives = 118/171 (69%)
Frame = +1
Query: 190 TKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 369
T +A+E +KGRV E SL DLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 370 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 549
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 550 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 702
+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPK 221
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 158 bits (384), Expect = 1e-37
Identities = 76/142 (53%), Positives = 98/142 (69%)
Frame = +1
Query: 277 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 456
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 457 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 636
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 637 CHGIYPLRDVCIRKVKVLKRPR 702
I+PL +RKVKVLK+P+
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPK 147
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 153 bits (372), Expect = 3e-36
Identities = 84/174 (48%), Positives = 116/174 (66%), Gaps = 1/174 (0%)
Frame = +1
Query: 184 RETKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 363
+ETK+ S GL G VFE SL LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 38 QETKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDK 94
Query: 364 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQVRAIRKKM 540
V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+ QV I
Sbjct: 95 RCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLIT 153
Query: 541 CEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 702
+I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+
Sbjct: 154 IQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPK 205
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 151 bits (367), Expect = 1e-35
Identities = 66/172 (38%), Positives = 114/172 (66%)
Frame = +1
Query: 190 TKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 369
T+IA++ L+GRVFE +L DL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 370 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 549
+++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 550 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKF 226
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 136 bits (328), Expect = 7e-31
Identities = 70/146 (47%), Positives = 98/146 (67%)
Frame = +1
Query: 190 TKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 369
T+IASE LKGRV EV+L DL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 370 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 549
+VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 550 ITRDVTNSELREVVNKLIPDSIAKDI 627
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 121 bits (291), Expect = 2e-26
Identities = 59/159 (37%), Positives = 97/159 (61%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR ++V+ DL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 693
+++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 109 bits (262), Expect = 7e-23
Identities = 59/170 (34%), Positives = 93/170 (54%)
Frame = +1
Query: 193 KIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 372
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 373 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 552
+ +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Query: 553 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 702
++ + +V KL + + +A I RDV IR+VKV+KRPR
Sbjct: 173 HNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPR 222
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 106 bits (254), Expect = 7e-22
Identities = 52/164 (31%), Positives = 93/164 (56%)
Frame = +1
Query: 202 SEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 381
+ + ++++VSL D+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 382 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 561
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 562 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 693
N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 99 bits (238), Expect = 6e-20
Identities = 56/176 (31%), Positives = 94/176 (53%)
Frame = +1
Query: 193 KIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 372
++ + + RV+E+S D+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 373 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 552
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 553 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFRDLEV 720
T + + ++ + + I +I + C I + V I KVKV+K P + +V
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQICQIESVYITKVKVIKAPALSNEQV 224
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = +1
Query: 526 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Score = 76.2 bits (179), Expect = 8e-13
Identities = 46/87 (52%), Positives = 58/87 (66%)
Frame = +1
Query: 169 LSTVPRETKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 348
L T + TKIAS+G RVFEVSL DLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 349 LTTDKLRWMVKKWQTLIEANIDVKTTD 429
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 35.9 bits (79), Expect = 1.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 86 IVDPFTRKDWYDVKAP 133
+VDPF++KDWYDV AP
Sbjct: 21 VVDPFSKKDWYDVNAP 36
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 76.2 bits (179), Expect = 8e-13
Identities = 50/160 (31%), Positives = 82/160 (51%)
Frame = +1
Query: 220 RVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 399
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 400 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 579
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 580 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
+ + +++ ++A D+ I P+R V I K+KVLK P
Sbjct: 164 GQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 75.8 bits (178), Expect = 1e-12
Identities = 51/161 (31%), Positives = 84/161 (52%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
E +N+++ +A +I K IYPLR V I K +++ RP
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIYPLRRVEIGKSELVYRP 193
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 74.5 bits (175), Expect = 3e-12
Identities = 53/168 (31%), Positives = 84/168 (50%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
I+ +V+T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFRDLEV 720
E V +I D +++ K IYP+R + IRK +VL P + +E+
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVEL 205
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 74.5 bits (175), Expect = 3e-12
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Frame = +1
Query: 205 EGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 384
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 385 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 564
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 565 TNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
+ E + + + +SI + I++A IYP+R IRK +VL+ P
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 71.7 bits (168), Expect = 2e-11
Identities = 52/163 (31%), Positives = 85/163 (52%)
Frame = +1
Query: 211 LKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 390
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 391 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 570
+ I+AN+DV+T DG+V+RV FT K A+ +Q++AIR+ M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 571 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
++ + + I ++ I + IYPLR V IRK +V P
Sbjct: 152 TDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 70.9 bits (166), Expect = 3e-11
Identities = 48/161 (29%), Positives = 79/161 (49%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR E +L +L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
IE +DV T DGY LRV + FT + + KT +Q RAIR M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
+ + + + + +I K IYP+R V IRK+++L P
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 592 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+F
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKF 38
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 66.9 bits (156), Expect = 5e-10
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 211 LKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 390
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 391 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 570
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 571 SELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
S L E++ ++ S+A I+++ IYPLR V I K K+L P
Sbjct: 149 STLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSKLLWVP 195
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +1
Query: 169 LSTVPRETKIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 348
L T + TKIAS+GLKG VFE+SL DLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 349 LTTD 360
L+ D
Sbjct: 105 LSCD 108
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 65.7 bits (153), Expect = 1e-09
Identities = 44/158 (27%), Positives = 82/158 (51%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR EVS D+ D KF+++ V L M++T D +R +V++ +
Sbjct: 43 GRTVEVSFYDITKDVSQLHIKLKFQIVK--VDDGIALTQLKLMEMTRDYIRSLVRRGTSR 100
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
++A +DV+T DG +RV + T +S+ KT +Q +AIR+ M +II+ + +
Sbjct: 101 VDAILDVQTKDGVKMRVMALAVT----VSRIKT-----SQKKAIRRIMFDIISEKAASLD 151
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 690
+ + + ++A +++ IYP++ V + K+KVL
Sbjct: 152 FDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL 189
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 61.3 bits (142), Expect = 3e-08
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 573
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 574 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFRD 711
E V ++I ++A +I I PLR I K KVL P ++
Sbjct: 158 TFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLFAPLIKE 203
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 60.9 bits (141), Expect = 3e-08
Identities = 50/162 (30%), Positives = 72/162 (44%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR E +L DL D +FR+ V L F+GM+LT D +R +V++ +
Sbjct: 50 GRNVETTLYDLTKDLSHINVKLRFRVNG--VDDGRALTQFNGMELTRDYVRNLVRRGSSK 107
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
+ DV T DG LR+ + T T T IRK + + + + S+
Sbjct: 108 VMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTHKHLIRKSIMDRLDKVGQESD 158
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 702
+V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 159 FDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 60.5 bits (140), Expect = 4e-08
Identities = 42/161 (26%), Positives = 75/161 (46%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
++++ ++ ++ I IYPLR V I+K + RP
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARP 191
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 58.8 bits (136), Expect = 1e-07
Identities = 45/161 (27%), Positives = 75/161 (46%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 699
V+ ++ +++ I IYPLR V I+K+ + RP
Sbjct: 151 FESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 58.4 bits (135), Expect = 2e-07
Identities = 44/161 (27%), Positives = 77/161 (47%)
Frame = +1
Query: 211 LKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 390
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 391 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 570
+ I A ++V+T DG+ +RV + T + KT IR +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKE 157
Query: 571 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 693
+ E V+ ++ + I C ++PL+ V I K +V++
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIE 198
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 56.8 bits (131), Expect = 6e-07
Identities = 42/165 (25%), Positives = 82/165 (49%)
Frame = +1
Query: 199 ASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 378
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 379 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 558
++++ I+ IDV T DGY++R+ + T K Q + ++IR K +++
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK---------RVQTSVKQSIRAKTRDVLLG 158
Query: 559 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 693
V + + ++ S+ +I+ IYP R V IRK ++L+
Sbjct: 159 YVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVIRKSQLLQ 203
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 53.6 bits (123), Expect = 5e-06
Identities = 45/161 (27%), Positives = 75/161 (46%)
Frame = +1
Query: 205 EGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 384
E +KGR+ + +L ++ D + F+ IAE V G F G ++T D LR +VK+
Sbjct: 42 ETVKGRIMQATLGEITNDYAKQHIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKR 99
Query: 385 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 564
+ I+ ++ V T D +R+ ++S A Q A+R + +
Sbjct: 100 RSSRIDCHVQVVTKDNKKVRL---------TISCYTFARANIAQEHALRNAITAGLVAQA 150
Query: 565 TNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 687
+L +VN ++ I+KD+ K +YP R V I K KV
Sbjct: 151 QAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 52.4 bits (120), Expect = 1e-05
Identities = 41/160 (25%), Positives = 75/160 (46%)
Frame = +1
Query: 211 LKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 390
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 391 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 570
+ I+A+ VKT D +++ + T T A+ +Q + +R+ + +++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAE 152
Query: 571 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 690
E++ ++ +A ++ IYPL+ V I K KVL
Sbjct: 153 KSFDELIKLVVNGKLASEVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 51.2 bits (117), Expect = 3e-05
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Frame = +1
Query: 205 EGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 384
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 385 WQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 561
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 562 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 678
++ V+ ++ ++K + C I+P+R + I K
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPIFPVRRIEIIK 190
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 49.2 bits (112), Expect = 1e-04
Identities = 37/160 (23%), Positives = 74/160 (46%)
Frame = +1
Query: 214 KGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 393
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 394 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNS 573
+ +DVKT+DGYV R+ + T + + +K A+R + ++I V
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK---------HALRLIIRDVIENTVPQM 152
Query: 574 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 693
+ + V I DI + +R + + KVK+++
Sbjct: 153 NIDQFVQAACYGKINSDILSRAKKLVKVRHMGLEKVKLVR 192
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 48.8 bits (111), Expect = 1e-04
Identities = 42/160 (26%), Positives = 70/160 (43%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GR EV + D + + FR+ + G+ F G ++ D +R MV++ +
Sbjct: 45 GRKVEVPVSDFTGNFRKSSTMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKER 102
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
I+ + KT DGY L V I + L+ K +R K+ I +
Sbjct: 103 IDIIMPSKTKDGYRL-VIKIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMT 153
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 696
L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 154 LPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 47.2 bits (107), Expect = 4e-04
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Frame = +1
Query: 220 RVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 396
R EVSL +L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 684
+ + D I I++ + P+++ I ++K
Sbjct: 178 IDFIYKICCSDVIGNSIKRRSKRVIPIKNFIISRIK 213
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 46.0 bits (104), Expect = 0.001
Identities = 41/163 (25%), Positives = 71/163 (43%)
Frame = +1
Query: 202 SEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 381
S + RV EV + +L + FR+ +G F G + D +R +V+
Sbjct: 41 SNSMVNRVVEVPISELTGNFKKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVR 98
Query: 382 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 561
+ + I+ DVKT+D ++ V + T+ + +K IRK + + I
Sbjct: 99 RRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNK 149
Query: 562 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 690
+ E V LI D I D+ A IYPL+ + +RK +++
Sbjct: 150 GLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV 192
>UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;
Alphaproteobacteria|Rep: FAD linked oxidase domain
protein - Methylobacterium extorquens PA1
Length = 990
Score = 36.3 bits (80), Expect = 0.83
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -1
Query: 328 RAHYVLAHIRRLI*ICGKTFPRQCQLVDQXGKLRKLFPSILPKQFSFPWVRLTSVVPTCL 149
R H V+AH R CG+T+ Q + R+ ++LP F R+ + P+CL
Sbjct: 774 RLHRVIAHEGRRPLCCGRTYLASGQTDRAREEARRTLDTLLP--FVRAGARVVGLEPSCL 831
Query: 148 LLNIDRSLDIVP-IFASEWVDNLLL 77
L D L ++P ASE + LL
Sbjct: 832 LTFRDEFLSLLPRAEASELAQSALL 856
>UniRef50_Q57U50 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1747
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = -3
Query: 737 RREVPSTSRSRKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGI---NLFTTSLSSE 570
+ ++PS S + +RG N + QTS+ MPW F++S S + N F++S S++
Sbjct: 1499 KAKLPSVSNTAQRGKLNGLFHKSQTSQINKMPWGRFTISHNPPSNVSLPNAFSSSYSAD 1557
>UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n=2;
Eukaryota|Rep: Serine/threonine-protein kinase TEL1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 2768
Score = 34.7 bits (76), Expect = 2.5
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = -3
Query: 728 VPSTSRSRKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGINLFTTSLSSELVTSRVM 549
+P+ S GLF TF RM T + M W ++++ +L T LSS L+ +R
Sbjct: 2007 LPTNSSVEHYGLFKTFARRMSTIQSAKMLWSQNETVMSIDMLKDLLHTPLSSNLI-ARAR 2065
Query: 548 ISHIFFLIALT*VCWA*HVLRWLKES 471
F +A+ + +++WL S
Sbjct: 2066 KQPFFQQMAILDINVKAQLVQWLSHS 2091
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -3
Query: 413 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 249
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 33.5 bits (73), Expect = 5.9
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 541 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFRD 711
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ +
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVEE 101
Query: 712 LEV 720
L +
Sbjct: 102 LSL 104
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 33.5 bits (73), Expect = 5.9
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = -3
Query: 461 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 288
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 287 NLRKDLSASVSACRSXRETSKTLPFNPSEAIFVSLG 180
L + + SV + S R S L F P EA+++++G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 5.9
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +1
Query: 310 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 489
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 490 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 627
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 7.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 564 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 457
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,706,440
Number of Sequences: 1657284
Number of extensions: 15850274
Number of successful extensions: 45963
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 44149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45928
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -