Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_H01
(766 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 263 2e-70
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 263 2e-70
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 254 7e-68
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 249 3e-66
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 202 3e-52
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 183 3e-46
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 29 9.2
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 263 bits (645), Expect = 2e-70
Identities = 127/171 (74%), Positives = 144/171 (84%)
Frame = +1
Query: 193 KIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 372
+IAS+ LKGRVFEVSL DLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 373 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 552
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 553 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
T +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 226
Score = 39.1 bits (87), Expect = 0.007
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 86 IVDPFTRKDWYDVKAP 133
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 135 SMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 227
+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 263 bits (645), Expect = 2e-70
Identities = 127/171 (74%), Positives = 144/171 (84%)
Frame = +1
Query: 193 KIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 372
+IAS+ LKGRVFEVSL DLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 373 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 552
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 553 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
T +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 226
Score = 39.1 bits (87), Expect = 0.007
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 86 IVDPFTRKDWYDVKAP 133
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 135 SMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 227
+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 254 bits (623), Expect = 7e-68
Identities = 122/163 (74%), Positives = 137/163 (84%)
Frame = +1
Query: 217 GRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 396
GRVFEVSL DLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 397 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 576
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 577 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 176
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 249 bits (610), Expect = 3e-66
Identities = 124/173 (71%), Positives = 141/173 (81%), Gaps = 2/173 (1%)
Frame = +1
Query: 193 KIASEGLKGRVFEVSLX-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 369
+IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYR 115
Query: 370 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCE 546
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +
Sbjct: 116 SMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTD 175
Query: 547 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 705
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRF 228
Score = 39.1 bits (87), Expect = 0.007
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 86 IVDPFTRKDWYDVKAP 133
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 135 SMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 227
+MF RQ+G TLVNRTQG +G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYFKGRVF 67
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 202 bits (494), Expect = 3e-52
Identities = 96/133 (72%), Positives = 112/133 (84%)
Frame = +1
Query: 193 KIASEGLKGRVFEVSLXDLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 372
+IAS+ LKGRVFEVSL DLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 373 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 552
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 553 TRDVTNSELREVV 591
T +V+ ++L++++
Sbjct: 176 TNEVSGADLKQLL 188
Score = 39.1 bits (87), Expect = 0.007
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 86 IVDPFTRKDWYDVKAP 133
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 135 SMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 227
+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 183 bits (445), Expect = 3e-46
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = +1
Query: 343 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 522
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 523 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 702
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 703 F 705
F
Sbjct: 121 F 121
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -2
Query: 675 SDANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDC 523
+ AN+ M LLD++ GV L+H E V + ++DC
Sbjct: 264 TSANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,456,602
Number of Sequences: 53049
Number of extensions: 760894
Number of successful extensions: 2382
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2380
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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